Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14950 and ABID97_RS14955 are separated by 54 nucleotides ABID97_RS14955 and ABID97_RS14960 overlap by 4 nucleotides ABID97_RS14960 and ABID97_RS14965 are separated by 100 nucleotides
ABID97_RS14950: ABID97_RS14950 - IclR family transcriptional regulator C-terminal domain-containing protein, at 3,107,120 to 3,107,890
_RS14950
ABID97_RS14955: ABID97_RS14955 - response regulator, at 3,107,945 to 3,108,604
_RS14955
ABID97_RS14960: ABID97_RS14960 - ATP-binding protein, at 3,108,601 to 3,109,932
_RS14960
ABID97_RS14965: ABID97_RS14965 - DegQ family serine endoprotease, at 3,110,033 to 3,111,502
_RS14965
Position (kb)
3108
3109
3110 Strain fitness (log2 ratio)
-1
0
1 at 3107.700 kb on - strand, within ABID97_RS14950 at 3108.018 kb on - strand, within ABID97_RS14955 at 3108.077 kb on + strand, within ABID97_RS14955 at 3108.077 kb on + strand, within ABID97_RS14955 at 3108.078 kb on - strand, within ABID97_RS14955 at 3108.237 kb on - strand, within ABID97_RS14955 at 3108.323 kb on + strand, within ABID97_RS14955 at 3108.324 kb on - strand, within ABID97_RS14955 at 3108.479 kb on + strand, within ABID97_RS14955 at 3108.479 kb on + strand, within ABID97_RS14955 at 3108.480 kb on - strand, within ABID97_RS14955 at 3108.480 kb on - strand, within ABID97_RS14955 at 3108.584 kb on + strand at 3108.584 kb on + strand at 3108.585 kb on - strand at 3108.946 kb on + strand, within ABID97_RS14960 at 3108.947 kb on - strand, within ABID97_RS14960 at 3108.962 kb on + strand, within ABID97_RS14960 at 3109.654 kb on + strand, within ABID97_RS14960 at 3109.654 kb on + strand, within ABID97_RS14960 at 3109.698 kb on - strand, within ABID97_RS14960 at 3109.839 kb on + strand at 3109.969 kb on - strand at 3110.702 kb on + strand, within ABID97_RS14965 at 3110.702 kb on + strand, within ABID97_RS14965 at 3110.702 kb on + strand, within ABID97_RS14965 at 3110.703 kb on - strand, within ABID97_RS14965 at 3110.703 kb on - strand, within ABID97_RS14965 at 3110.703 kb on - strand, within ABID97_RS14965 at 3110.805 kb on - strand, within ABID97_RS14965
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 3,107,700 - ABID97_RS14950 0.75 +0.1 3,108,018 - ABID97_RS14955 0.11 -0.0 3,108,077 + ABID97_RS14955 0.20 +1.3 3,108,077 + ABID97_RS14955 0.20 +0.3 3,108,078 - ABID97_RS14955 0.20 -1.0 3,108,237 - ABID97_RS14955 0.44 -0.2 3,108,323 + ABID97_RS14955 0.57 -0.2 3,108,324 - ABID97_RS14955 0.57 +0.1 3,108,479 + ABID97_RS14955 0.81 -0.7 3,108,479 + ABID97_RS14955 0.81 -0.3 3,108,480 - ABID97_RS14955 0.81 +0.4 3,108,480 - ABID97_RS14955 0.81 +0.4 3,108,584 + +1.3 3,108,584 + -0.7 3,108,585 - +0.2 3,108,946 + ABID97_RS14960 0.26 +0.7 3,108,947 - ABID97_RS14960 0.26 +0.5 3,108,962 + ABID97_RS14960 0.27 +1.5 3,109,654 + ABID97_RS14960 0.79 +0.2 3,109,654 + ABID97_RS14960 0.79 -0.8 3,109,698 - ABID97_RS14960 0.82 +0.3 3,109,839 + +1.6 3,109,969 - +0.3 3,110,702 + ABID97_RS14965 0.46 +0.1 3,110,702 + ABID97_RS14965 0.46 -0.2 3,110,702 + ABID97_RS14965 0.46 -0.6 3,110,703 - ABID97_RS14965 0.46 +0.5 3,110,703 - ABID97_RS14965 0.46 -0.0 3,110,703 - ABID97_RS14965 0.46 +0.1 3,110,805 - ABID97_RS14965 0.53 +0.8
Or see this region's nucleotide sequence