Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_359 and PfGW456L13_360 are separated by 42 nucleotides PfGW456L13_360 and PfGW456L13_361 are separated by 0 nucleotides PfGW456L13_361 and PfGW456L13_362 overlap by 1 nucleotides PfGW456L13_362 and PfGW456L13_363 are separated by 268 nucleotides
PfGW456L13_359 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) <small>(from data)</small>, at 419,401 to 420,138
_359
PfGW456L13_360 - FIG00956267: hypothetical protein, at 420,181 to 420,438
_360
PfGW456L13_361 - Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-), at 420,439 to 421,077
_361
PfGW456L13_362 - Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 421,077 to 421,670
_362
PfGW456L13_363 - MFS permease, at 421,939 to 423,603
_363
Position (kb) 420
421
422 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 419.459 kb on + strand at 419.460 kb on - strand at 419.460 kb on - strand at 419.599 kb on + strand, within PfGW456L13_359 at 419.599 kb on + strand, within PfGW456L13_359 at 419.600 kb on - strand, within PfGW456L13_359 at 419.600 kb on - strand, within PfGW456L13_359 at 419.600 kb on - strand, within PfGW456L13_359 at 419.600 kb on - strand, within PfGW456L13_359 at 419.640 kb on + strand, within PfGW456L13_359 at 419.640 kb on + strand, within PfGW456L13_359 at 419.642 kb on + strand, within PfGW456L13_359 at 419.643 kb on - strand, within PfGW456L13_359 at 419.643 kb on - strand, within PfGW456L13_359 at 419.840 kb on + strand, within PfGW456L13_359 at 419.840 kb on + strand, within PfGW456L13_359 at 419.840 kb on + strand, within PfGW456L13_359 at 419.840 kb on + strand, within PfGW456L13_359 at 419.840 kb on + strand, within PfGW456L13_359 at 419.841 kb on - strand, within PfGW456L13_359 at 419.841 kb on - strand, within PfGW456L13_359 at 419.841 kb on - strand, within PfGW456L13_359 at 419.861 kb on + strand, within PfGW456L13_359 at 419.861 kb on + strand, within PfGW456L13_359 at 419.861 kb on + strand, within PfGW456L13_359 at 419.861 kb on + strand, within PfGW456L13_359 at 419.861 kb on + strand, within PfGW456L13_359 at 419.862 kb on - strand, within PfGW456L13_359 at 419.862 kb on - strand, within PfGW456L13_359 at 420.111 kb on + strand at 420.112 kb on - strand at 420.129 kb on + strand at 420.130 kb on - strand at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.270 kb on - strand, within PfGW456L13_360 at 420.270 kb on - strand, within PfGW456L13_360 at 420.272 kb on + strand, within PfGW456L13_360 at 420.273 kb on - strand, within PfGW456L13_360 at 420.440 kb on + strand at 420.441 kb on - strand at 420.493 kb on - strand at 420.566 kb on + strand, within PfGW456L13_361 at 420.567 kb on - strand, within PfGW456L13_361 at 420.567 kb on - strand, within PfGW456L13_361 at 420.567 kb on - strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 421.078 kb on + strand at 421.303 kb on + strand, within PfGW456L13_362 at 421.303 kb on + strand, within PfGW456L13_362 at 421.303 kb on + strand, within PfGW456L13_362 at 421.304 kb on - strand, within PfGW456L13_362 at 421.381 kb on + strand, within PfGW456L13_362 at 421.381 kb on + strand, within PfGW456L13_362 at 421.381 kb on + strand, within PfGW456L13_362 at 421.382 kb on - strand, within PfGW456L13_362 at 421.382 kb on - strand, within PfGW456L13_362 at 421.382 kb on - strand, within PfGW456L13_362 at 421.452 kb on - strand, within PfGW456L13_362 at 421.484 kb on + strand, within PfGW456L13_362 at 421.485 kb on - strand, within PfGW456L13_362 at 421.485 kb on - strand, within PfGW456L13_362 at 421.508 kb on + strand, within PfGW456L13_362 at 421.508 kb on + strand, within PfGW456L13_362 at 421.658 kb on + strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.712 kb on - strand at 421.713 kb on + strand at 421.713 kb on + strand at 421.714 kb on - strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.940 kb on + strand at 421.941 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 419,459 + -2.6 419,460 - -3.7 419,460 - -0.1 419,599 + PfGW456L13_359 0.27 -3.9 419,599 + PfGW456L13_359 0.27 -2.8 419,600 - PfGW456L13_359 0.27 -3.4 419,600 - PfGW456L13_359 0.27 -3.4 419,600 - PfGW456L13_359 0.27 -4.7 419,600 - PfGW456L13_359 0.27 -3.1 419,640 + PfGW456L13_359 0.32 -4.6 419,640 + PfGW456L13_359 0.32 -3.4 419,642 + PfGW456L13_359 0.33 -3.6 419,643 - PfGW456L13_359 0.33 -2.2 419,643 - PfGW456L13_359 0.33 -2.6 419,840 + PfGW456L13_359 0.59 -3.9 419,840 + PfGW456L13_359 0.59 -3.3 419,840 + PfGW456L13_359 0.59 -0.3 419,840 + PfGW456L13_359 0.59 -5.2 419,840 + PfGW456L13_359 0.59 -3.5 419,841 - PfGW456L13_359 0.60 -4.3 419,841 - PfGW456L13_359 0.60 -3.1 419,841 - PfGW456L13_359 0.60 -2.1 419,861 + PfGW456L13_359 0.62 -3.4 419,861 + PfGW456L13_359 0.62 -5.0 419,861 + PfGW456L13_359 0.62 -3.6 419,861 + PfGW456L13_359 0.62 -1.6 419,861 + PfGW456L13_359 0.62 -3.7 419,862 - PfGW456L13_359 0.62 -3.8 419,862 - PfGW456L13_359 0.62 -0.9 420,111 + -1.4 420,112 - -4.8 420,129 + -1.6 420,130 - -5.5 420,269 + PfGW456L13_360 0.34 -2.3 420,269 + PfGW456L13_360 0.34 -4.1 420,269 + PfGW456L13_360 0.34 -3.1 420,269 + PfGW456L13_360 0.34 -4.7 420,269 + PfGW456L13_360 0.34 -3.5 420,270 - PfGW456L13_360 0.34 +0.2 420,270 - PfGW456L13_360 0.34 +0.4 420,272 + PfGW456L13_360 0.35 -3.2 420,273 - PfGW456L13_360 0.36 -0.4 420,440 + -3.4 420,441 - +0.2 420,493 - -2.2 420,566 + PfGW456L13_361 0.20 -4.4 420,567 - PfGW456L13_361 0.20 -4.7 420,567 - PfGW456L13_361 0.20 -1.9 420,567 - PfGW456L13_361 0.20 -3.1 420,611 + PfGW456L13_361 0.27 -4.2 420,611 + PfGW456L13_361 0.27 -4.8 420,611 + PfGW456L13_361 0.27 -3.5 420,611 + PfGW456L13_361 0.27 -3.4 420,611 + PfGW456L13_361 0.27 -3.1 420,611 + PfGW456L13_361 0.27 -4.1 420,611 + PfGW456L13_361 0.27 -2.6 420,612 - PfGW456L13_361 0.27 -3.5 420,612 - PfGW456L13_361 0.27 -2.4 420,612 - PfGW456L13_361 0.27 -3.1 420,612 - PfGW456L13_361 0.27 -4.0 420,612 - PfGW456L13_361 0.27 -4.0 420,612 - PfGW456L13_361 0.27 -2.6 420,612 - PfGW456L13_361 0.27 -1.5 420,612 - PfGW456L13_361 0.27 -3.8 420,612 - PfGW456L13_361 0.27 -3.8 420,612 - PfGW456L13_361 0.27 -3.8 420,612 - PfGW456L13_361 0.27 -4.1 420,612 - PfGW456L13_361 0.27 -3.1 420,612 - PfGW456L13_361 0.27 -4.2 420,614 + PfGW456L13_361 0.27 -3.9 420,614 + PfGW456L13_361 0.27 -4.7 420,614 + PfGW456L13_361 0.27 -3.6 420,614 + PfGW456L13_361 0.27 -4.8 420,614 + PfGW456L13_361 0.27 -3.6 420,614 + PfGW456L13_361 0.27 -0.9 420,614 + PfGW456L13_361 0.27 -4.5 420,614 + PfGW456L13_361 0.27 -2.5 420,615 - PfGW456L13_361 0.28 -2.8 420,615 - PfGW456L13_361 0.28 -1.3 420,615 - PfGW456L13_361 0.28 -3.6 420,615 - PfGW456L13_361 0.28 -3.4 420,615 - PfGW456L13_361 0.28 -3.3 420,615 - PfGW456L13_361 0.28 -2.9 420,615 - PfGW456L13_361 0.28 -3.8 421,078 + -2.3 421,303 + PfGW456L13_362 0.38 -2.3 421,303 + PfGW456L13_362 0.38 -4.3 421,303 + PfGW456L13_362 0.38 -3.6 421,304 - PfGW456L13_362 0.38 -3.8 421,381 + PfGW456L13_362 0.51 -3.8 421,381 + PfGW456L13_362 0.51 -2.2 421,381 + PfGW456L13_362 0.51 -4.7 421,382 - PfGW456L13_362 0.51 -4.2 421,382 - PfGW456L13_362 0.51 -3.6 421,382 - PfGW456L13_362 0.51 -3.6 421,452 - PfGW456L13_362 0.63 -1.6 421,484 + PfGW456L13_362 0.69 -3.4 421,485 - PfGW456L13_362 0.69 -4.1 421,485 - PfGW456L13_362 0.69 -3.8 421,508 + PfGW456L13_362 0.73 -4.4 421,508 + PfGW456L13_362 0.73 -3.9 421,658 + -2.2 421,659 - -2.3 421,659 - -1.8 421,659 - -4.2 421,659 - -3.7 421,659 - -1.8 421,712 - +0.6 421,713 + -2.1 421,713 + -2.0 421,714 - -0.5 421,787 + -0.4 421,787 + -0.9 421,787 + -0.4 421,787 + -0.5 421,787 + -0.5 421,787 + -0.1 421,787 + -0.6 421,787 + -0.2 421,787 + +0.7 421,787 + +0.8 421,787 + -1.2 421,787 + -0.1 421,787 + -1.3 421,787 + +0.5 421,787 + +0.0 421,787 + +0.3 421,787 + +0.6 421,787 + -1.6 421,787 + -0.8 421,787 + +0.6 421,787 + -0.0 421,787 + +0.2 421,787 + -0.1 421,788 - -1.8 421,788 - +0.5 421,788 - -1.3 421,788 - -1.0 421,788 - -1.6 421,788 - +0.9 421,788 - -0.6 421,788 - +0.0 421,788 - +0.2 421,788 - +0.0 421,788 - -0.1 421,788 - -0.2 421,788 - +0.2 421,788 - +1.4 421,788 - -1.3 421,788 - -1.4 421,788 - +1.0 421,788 - -0.3 421,788 - +1.4 421,797 + +0.6 421,797 + -0.3 421,797 + +0.6 421,797 + +0.3 421,797 + -0.6 421,797 + +0.6 421,797 + -0.6 421,797 + -0.1 421,797 + -1.1 421,798 - +0.5 421,798 - +0.3 421,798 - -0.1 421,798 - -1.0 421,798 - -0.1 421,798 - +0.3 421,798 - +0.8 421,798 - +0.0 421,940 + -0.8 421,941 - -0.1
Or see this region's nucleotide sequence