Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2935

Experiment: L-Phenylalanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine (C)
3,271,702	+		PfGW456L13_2934	0.28	-1.6
3,271,728	+		PfGW456L13_2934	0.30	-0.1
3,271,728	+		PfGW456L13_2934	0.30	+1.4
3,271,728	+		PfGW456L13_2934	0.30	-0.0
3,271,728	+		PfGW456L13_2934	0.30	-0.8
3,271,740	+		PfGW456L13_2934	0.32	+0.6
3,271,740	+		PfGW456L13_2934	0.32	+0.4
3,271,740	+		PfGW456L13_2934	0.32	+0.4
3,271,740	+		PfGW456L13_2934	0.32	+1.5
3,271,740	+		PfGW456L13_2934	0.32	+0.6
3,271,740	+		PfGW456L13_2934	0.32	-1.3
3,271,740	+		PfGW456L13_2934	0.32	+0.9
3,271,741	-		PfGW456L13_2934	0.32	-1.1
3,271,741	-		PfGW456L13_2934	0.32	+1.0
3,271,741	-		PfGW456L13_2934	0.32	-0.3
3,271,741	-		PfGW456L13_2934	0.32	-1.2
3,271,741	-		PfGW456L13_2934	0.32	+0.2
3,271,741	-		PfGW456L13_2934	0.32	-2.2
3,271,906	+		PfGW456L13_2934	0.49	+1.5
3,271,906	+		PfGW456L13_2934	0.49	+1.0
3,271,907	-		PfGW456L13_2934	0.49	-0.3
3,271,907	-		PfGW456L13_2934	0.49	-0.5
3,271,907	-		PfGW456L13_2934	0.49	+0.1
3,271,978	-		PfGW456L13_2934	0.57	-2.6
3,272,034	+		PfGW456L13_2934	0.63	-1.0
3,272,034	+		PfGW456L13_2934	0.63	-0.3
3,272,034	+		PfGW456L13_2934	0.63	+1.0
3,272,035	-		PfGW456L13_2934	0.63	+0.0
3,272,035	-		PfGW456L13_2934	0.63	+0.7
3,272,035	-		PfGW456L13_2934	0.63	+1.0
3,272,035	-		PfGW456L13_2934	0.63	-2.0
3,272,035	-		PfGW456L13_2934	0.63	+0.2
3,272,035	-		PfGW456L13_2934	0.63	+0.6
3,272,145	+		PfGW456L13_2934	0.75	-0.1
3,272,146	-		PfGW456L13_2934	0.75	-1.7
3,272,146	-		PfGW456L13_2934	0.75	-1.4
3,272,176	-		PfGW456L13_2934	0.78	-0.3
3,272,176	-		PfGW456L13_2934	0.78	-0.3
3,272,188	-		PfGW456L13_2934	0.79	-0.4
3,272,188	-		PfGW456L13_2934	0.79	-1.0
3,272,188	-		PfGW456L13_2934	0.79	-0.4
3,272,323	+				+0.5
3,272,324	-				-1.9
3,272,386	-				-3.4
3,272,408	+				+1.6
3,272,409	-				-1.0
3,272,434	+				-0.5
3,272,435	-				-1.7
3,272,435	-				-1.7
3,272,439	+				-0.2
3,272,439	+				-0.6
3,272,442	+				-0.3
3,272,520	+				-1.2
3,272,520	+				+0.6
3,272,520	+				-1.3
3,272,520	+				-0.5
3,272,520	+				-0.5
3,272,521	-				-2.6
3,272,521	-				-1.0
3,272,589	+				-0.4
3,272,589	+				-0.9
3,272,589	+				-0.1
3,272,589	+				-0.1
3,272,589	+				+0.1
3,272,589	+				+1.1
3,272,590	-				-4.3
3,272,590	-				-2.4
3,272,590	-				-2.7
3,272,590	-				-2.2
3,272,590	-				-0.4
3,272,596	-				-1.7
3,272,596	-				-1.0
3,272,606	-				-3.2
3,272,646	+				-2.9
3,272,910	-		PfGW456L13_2935	0.25	-2.9
3,273,012	-		PfGW456L13_2935	0.35	-3.3
3,273,012	-		PfGW456L13_2935	0.35	-3.9
3,273,012	-		PfGW456L13_2935	0.35	-1.4
3,273,047	+		PfGW456L13_2935	0.38	-4.3
3,273,047	+		PfGW456L13_2935	0.38	-1.4
3,273,047	+		PfGW456L13_2935	0.38	-1.6
3,273,047	+		PfGW456L13_2935	0.38	-2.1
3,273,047	+		PfGW456L13_2935	0.38	-3.1
3,273,048	-		PfGW456L13_2935	0.38	-3.3
3,273,048	-		PfGW456L13_2935	0.38	-4.2
3,273,048	-		PfGW456L13_2935	0.38	-2.7
3,273,048	-		PfGW456L13_2935	0.38	-4.1
3,273,048	-		PfGW456L13_2935	0.38	-2.1
3,273,063	+		PfGW456L13_2935	0.40	-2.6
3,273,064	-		PfGW456L13_2935	0.40	-1.0
3,273,138	-		PfGW456L13_2935	0.47	-1.6
3,273,155	+		PfGW456L13_2935	0.48	-3.0
3,273,171	-		PfGW456L13_2935	0.50	-2.4
3,273,224	+		PfGW456L13_2935	0.55	-4.0
3,273,224	+		PfGW456L13_2935	0.55	-3.2
3,273,446	+		PfGW456L13_2935	0.75	-3.8
3,273,446	+		PfGW456L13_2935	0.75	-2.1
3,273,447	-		PfGW456L13_2935	0.75	-2.0
3,273,447	-		PfGW456L13_2935	0.75	-3.2
3,273,447	-		PfGW456L13_2935	0.75	-3.3
3,273,447	-		PfGW456L13_2935	0.75	-3.2
3,273,449	+		PfGW456L13_2935	0.75	-2.7
3,273,449	+		PfGW456L13_2935	0.75	-2.0
3,273,449	+		PfGW456L13_2935	0.75	-3.4
3,273,449	+		PfGW456L13_2935	0.75	-4.0
3,273,449	+		PfGW456L13_2935	0.75	-2.2
3,273,450	-		PfGW456L13_2935	0.76	-3.7
3,273,710	+				-2.6
3,273,710	+				-3.6
3,273,710	+				-2.2
3,273,779	+				-3.3
3,273,840	+				-0.4
3,273,841	-				-0.5
3,273,915	+				+0.2
3,273,915	+				-0.2
3,273,915	+				-0.7
3,273,916	-				+0.5
3,273,916	-				-0.8
3,273,916	-				+0.6
3,273,916	-				-0.1
3,273,916	-				-0.8
3,273,916	-				+0.5
3,273,916	-				+1.8
3,273,916	-				+0.3
3,273,916	-				-0.7
3,273,916	-				+0.9
3,273,916	-				+0.3
3,273,916	-				+0.4
3,273,916	-				-3.0
3,273,990	+		PfGW456L13_2936	0.17	+0.6
3,273,990	+		PfGW456L13_2936	0.17	-0.3
3,273,990	+		PfGW456L13_2936	0.17	+0.3
3,273,990	+		PfGW456L13_2936	0.17	+1.8
3,273,990	+		PfGW456L13_2936	0.17	+0.3
3,273,991	-		PfGW456L13_2936	0.17	+0.4
3,273,991	-		PfGW456L13_2936	0.17	+1.1
3,273,991	-		PfGW456L13_2936	0.17	-0.5
3,273,991	-		PfGW456L13_2936	0.17	-1.0
3,274,039	+		PfGW456L13_2936	0.23	-0.5
3,274,039	+		PfGW456L13_2936	0.23	-1.3
3,274,039	+				+2.2
3,274,040	-		PfGW456L13_2936	0.23	+0.0
3,274,040	-		PfGW456L13_2936	0.23	-0.3
3,274,041	+		PfGW456L13_2936	0.23	-0.1
3,274,041	+		PfGW456L13_2936	0.23	-1.4
3,274,041	+		PfGW456L13_2936	0.23	+0.6
3,274,041	+		PfGW456L13_2936	0.23	-0.3
3,274,041	+		PfGW456L13_2936	0.23	-1.0
3,274,041	+		PfGW456L13_2936	0.23	-0.4
3,274,041	+		PfGW456L13_2936	0.23	-1.2
3,274,042	-		PfGW456L13_2936	0.23	-0.4
3,274,042	-		PfGW456L13_2936	0.23	+0.3
3,274,042	-		PfGW456L13_2936	0.23	+1.7
3,274,042	-		PfGW456L13_2936	0.23	-0.5
3,274,042	-		PfGW456L13_2936	0.23	-1.1
3,274,042	-		PfGW456L13_2936	0.23	-0.5
3,274,042	-		PfGW456L13_2936	0.23	+0.7
3,274,042	-		PfGW456L13_2936	0.23	-0.6
3,274,187	+				+0.2
3,274,187	+		PfGW456L13_2936	0.39	+1.4
3,274,188	-		PfGW456L13_2936	0.40	-0.2
3,274,188	-		PfGW456L13_2936	0.40	-1.2
3,274,234	-		PfGW456L13_2936	0.45	-1.3
3,274,234	-		PfGW456L13_2936	0.45	+0.1
3,274,290	+		PfGW456L13_2936	0.51	-0.1
3,274,290	+		PfGW456L13_2936	0.51	+0.6
3,274,291	-		PfGW456L13_2936	0.51	-0.2
3,274,291	-		PfGW456L13_2936	0.51	+1.1
3,274,344	+		PfGW456L13_2936	0.57	+0.6
3,274,345	-		PfGW456L13_2936	0.57	-0.2
3,274,345	-		PfGW456L13_2936	0.57	+0.5
3,274,407	+		PfGW456L13_2936	0.64	-0.4
3,274,659	+				-0.4
3,274,659	+				+0.2
3,274,659	+				-1.0
3,274,659	+				-0.2
3,274,659	+				+0.4
3,274,659	+				-0.7
3,274,659	+				+2.4
3,274,659	+				+0.4
3,274,659	+				-0.4
3,274,659	+				-0.5
3,274,659	+				-1.4
3,274,659	+				+0.1
3,274,660	-				-0.6
3,274,660	-				+0.1
3,274,660	-				-0.7
3,274,660	-				+1.4
3,274,660	-				+0.6
3,274,660	-				-0.1
3,274,660	-				-1.8
3,274,660	-				+0.2
3,274,660	-				+0.6
3,274,662	+				+0.6
3,274,662	+				+1.2
3,274,662	+				-0.6
3,274,662	+				-0.7
3,274,662	+				+0.5
3,274,662	+				+0.7
3,274,662	+				+0.7
3,274,663	-				+0.2
3,274,663	-				-0.5
3,274,663	-				-0.3
3,274,663	-				+0.8
3,274,665	+				-0.3
3,274,665	+				-1.2
3,274,665	+				-0.6
3,274,665	+				-0.1
3,274,665	+				+0.5
3,274,665	+				-0.9
3,274,665	+				-0.2
3,274,665	+				+0.8
3,274,665	+				-0.2
3,274,665	+				-0.3
3,274,665	+				+0.1
3,274,666	-				+0.2
3,274,666	-				-1.0
3,274,666	-				+0.5
3,274,666	-				+0.5
3,274,666	-				-1.1
3,274,666	-				-0.6
3,274,666	-				-0.2
3,274,666	-				-0.6
3,274,666	-				-0.7