Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30450

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,489,064	+		PFLU_RS06660	0.80	+2.1
1,489,064	+		PFLU_RS06660	0.80	+1.1
1,489,065	-		PFLU_RS06660	0.80	+4.3
1,489,065	-		PFLU_RS06660	0.80	+0.1
1,489,065	-		PFLU_RS06660	0.80	-1.5
1,489,065	-		PFLU_RS06660	0.80	+2.1
1,489,103	+		PFLU_RS06660	0.81	-0.1
1,489,103	+		PFLU_RS06660	0.81	+0.5
1,489,103	+		PFLU_RS06660	0.81	-1.1
1,489,103	+		PFLU_RS06660	0.81	-0.3
1,489,103	+		PFLU_RS06660	0.81	+1.6
1,489,103	+		PFLU_RS06660	0.81	-0.5
1,489,103	+		PFLU_RS06660	0.81	+3.8
1,489,103	+		PFLU_RS06660	0.81	+0.7
1,489,104	-		PFLU_RS06660	0.81	-0.1
1,489,104	-		PFLU_RS06660	0.81	-3.6
1,489,104	-		PFLU_RS06660	0.81	+1.3
1,489,104	-		PFLU_RS06660	0.81	+1.3
1,489,104	-		PFLU_RS06660	0.81	-0.4
1,489,104	-		PFLU_RS06660	0.81	-0.0
1,489,104	-		PFLU_RS06660	0.81	+1.4
1,489,104	-		PFLU_RS06660	0.81	-0.9
1,489,104	-		PFLU_RS06660	0.81	-1.1
1,489,104	-		PFLU_RS06660	0.81	+0.2
1,489,104	-		PFLU_RS06660	0.81	+0.1
1,489,135	+		PFLU_RS06660	0.83	+0.3
1,489,135	+		PFLU_RS06660	0.83	+0.9
1,489,135	+		PFLU_RS06660	0.83	-2.8
1,489,135	+		PFLU_RS06660	0.83	+1.2
1,489,135	+		PFLU_RS06660	0.83	+0.6
1,489,135	+		PFLU_RS06660	0.83	+0.5
1,489,136	-		PFLU_RS06660	0.83	+1.8
1,489,136	-		PFLU_RS06660	0.83	-2.7
1,489,137	+		PFLU_RS06660	0.83	+0.9
1,489,137	+		PFLU_RS06660	0.83	+2.1
1,489,137	+		PFLU_RS06660	0.83	+1.9
1,489,137	+		PFLU_RS06660	0.83	-0.7
1,489,137	+		PFLU_RS06660	0.83	-0.3
1,489,137	+		PFLU_RS06660	0.83	-1.8
1,489,137	+		PFLU_RS06660	0.83	-0.5
1,489,137	+		PFLU_RS06660	0.83	-0.7
1,489,137	+		PFLU_RS06660	0.83	+1.5
1,489,137	+		PFLU_RS06660	0.83	-1.4
1,489,138	-		PFLU_RS06660	0.83	+1.4
1,489,138	-		PFLU_RS06660	0.83	-1.3
1,489,138	-		PFLU_RS06660	0.83	-0.1
1,489,138	-		PFLU_RS06660	0.83	-0.0
1,489,138	-		PFLU_RS06660	0.83	+2.2
1,489,138	-		PFLU_RS06660	0.83	-0.7
1,489,138	-		PFLU_RS06660	0.83	-0.1
1,489,138	-		PFLU_RS06660	0.83	-0.3
1,489,138	-		PFLU_RS06660	0.83	-0.4
1,489,151	+		PFLU_RS06660	0.83	+1.7
1,489,151	+		PFLU_RS06660	0.83	+1.1
1,489,151	+		PFLU_RS06660	0.83	+2.1
1,489,151	+		PFLU_RS06660	0.83	-0.1
1,489,151	+		PFLU_RS06660	0.83	+0.4
1,489,151	+		PFLU_RS06660	0.83	+0.9
1,489,151	+		PFLU_RS06660	0.83	-0.5
1,489,151	+		PFLU_RS06660	0.83	-0.2
1,489,151	+		PFLU_RS06660	0.83	-1.4
1,489,151	+		PFLU_RS06660	0.83	-0.0
1,489,151	+		PFLU_RS06660	0.83	+0.6
1,489,151	+		PFLU_RS06660	0.83	+1.1
1,489,151	+		PFLU_RS06660	0.83	+1.3
1,489,151	+		PFLU_RS06660	0.83	+0.8
1,489,152	-		PFLU_RS06660	0.83	-1.4
1,489,152	-		PFLU_RS06660	0.83	+0.4
1,489,152	-		PFLU_RS06660	0.83	-0.5
1,489,152	-		PFLU_RS06660	0.83	-1.6
1,489,152	-		PFLU_RS06660	0.83	+0.4
1,489,152	-		PFLU_RS06660	0.83	+1.3
1,489,165	+		PFLU_RS06660	0.84	+1.3
1,489,166	-		PFLU_RS06660	0.84	+0.1
1,489,250	+		PFLU_RS06660	0.88	+0.7
1,489,251	-		PFLU_RS06660	0.88	+1.1
1,489,431	-				+1.3
1,489,455	+				+2.1
1,489,455	+				-0.0
1,489,455	+				+0.5
1,489,456	-				+0.3
1,489,456	-				-0.5
1,489,471	+				+2.0
1,489,472	-				+1.9
1,489,474	+				-3.3
1,489,474	+				+1.1
1,489,474	+				-3.4
1,489,474	+				+0.0
1,489,474	+				-0.4
1,489,474	+				+1.3
1,489,474	+				+1.0
1,489,474	+				-0.1
1,489,474	+				+2.3
1,489,474	+				-1.1
1,489,474	+				+1.2
1,489,474	+				-0.2
1,489,474	+				-1.1
1,489,474	+				-1.4
1,489,474	+				+1.1
1,489,474	+				-1.6
1,489,474	+				+1.0
1,489,474	+				+0.7
1,489,474	+				+1.2
1,489,474	+				+0.4
1,489,474	+				+0.5
1,489,474	+				+0.0
1,489,474	+				+0.2
1,489,475	-				+1.8
1,489,475	-				-2.5
1,489,475	-				-0.5
1,489,475	-				-2.8
1,489,475	-				-0.3
1,489,475	-				+2.2
1,489,475	-				+0.9
1,489,475	-				-1.0
1,489,475	-				+0.3
1,489,516	+				-1.9
1,489,517	-				+1.5
1,489,517	-				+1.3
1,489,517	-				+0.3
1,489,527	+				+1.1
1,489,528	-				+2.6
1,489,528	-				-0.9
1,489,528	-				-0.7
1,489,528	-				+0.1
1,489,542	+				+0.6
1,489,542	+				+1.9
1,489,543	-				-2.2
1,489,543	-				-2.8
1,489,543	-				-2.1
1,489,573	+				-0.7
1,489,573	+				+0.8
1,489,573	+				+1.7
1,489,573	+				+2.1
1,489,573	+				-2.7
1,489,573	+				-0.2
1,489,573	+				-1.1
1,489,573	+				-2.9
1,489,574	-				+2.4
1,489,574	-				+0.4
1,489,574	-				-2.0
1,489,574	-				+1.3
1,489,574	-				+1.8
1,489,574	-				-0.2
1,489,574	-				+0.1
1,489,574	-				+1.3
1,489,574	-				-1.8
1,489,574	-				-0.7
1,489,585	+				-0.1
1,489,585	+				-2.9
1,489,586	-				-0.7
1,489,587	+				-1.0
1,489,587	+				+1.1
1,489,587	+				+0.3
1,489,587	+				-2.0
1,489,587	+				-2.0
1,489,587	+				+0.1
1,489,587	+				+0.4
1,489,588	-				+1.0
1,489,588	-				-1.7
1,489,588	-				-2.9
1,489,588	-				+1.0
1,489,588	-				+1.1
1,489,667	+				+2.6
1,489,667	+				+0.4
1,489,668	-				-1.4
1,489,668	-				+0.5
1,489,668	-				+3.1
1,489,757	-		PFLU_RS06665	0.25	+0.5
1,489,757	-		PFLU_RS06665	0.25	+0.0
1,489,767	-		PFLU_RS06665	0.28	-1.4
1,489,767	-		PFLU_RS06665	0.28	-0.1
1,489,793	-		PFLU_RS06665	0.35	-2.2
1,489,793	-		PFLU_RS06665	0.35	-1.1
1,489,793	-		PFLU_RS06665	0.35	-0.7
1,489,793	-		PFLU_RS06665	0.35	-0.3
1,489,793	-		PFLU_RS06665	0.35	-2.6
1,489,811	+		PFLU_RS06665	0.40	+0.7
1,490,053	+				-0.8
1,490,053	+				+1.5
1,490,066	+		PFLU_RS30450	0.15	-2.6
1,490,067	-		PFLU_RS30450	0.16	+0.1
1,490,086	+		PFLU_RS30450	0.24	+0.6
1,490,087	-		PFLU_RS30450	0.24	+0.1
1,490,087	-		PFLU_RS30450	0.24	-3.1
1,490,087	-		PFLU_RS30450	0.24	+1.7
1,490,124	+		PFLU_RS30450	0.40	-0.5
1,490,125	-		PFLU_RS30450	0.40	-0.3
1,490,125	-		PFLU_RS30450	0.40	+1.9
1,490,125	-		PFLU_RS30450	0.40	+0.1
1,490,126	+		PFLU_RS30450	0.41	+1.1
1,490,126	+		PFLU_RS30450	0.41	-0.0
1,490,127	-		PFLU_RS30450	0.41	-0.5
1,490,127	-		PFLU_RS30450	0.41	+0.3
1,490,173	-		PFLU_RS30450	0.61	-1.4
1,490,182	-		PFLU_RS30450	0.65	-1.4
1,490,192	-		PFLU_RS30450	0.69	-0.5
1,490,216	+		PFLU_RS30450	0.79	+2.5
1,490,216	+		PFLU_RS30450	0.79	+2.5
1,490,216	+		PFLU_RS30450	0.79	+0.4
1,490,216	+		PFLU_RS30450	0.79	+0.6
1,490,216	+		PFLU_RS30450	0.79	-1.0
1,490,216	+		PFLU_RS30450	0.79	+0.7
1,490,216	+		PFLU_RS30450	0.79	+0.3
1,490,216	+		PFLU_RS30450	0.79	-0.7
1,490,217	-		PFLU_RS30450	0.80	+0.4
1,490,217	-		PFLU_RS30450	0.80	-0.3
1,490,217	-		PFLU_RS30450	0.80	-0.9
1,490,217	-		PFLU_RS30450	0.80	+0.2
1,490,217	-		PFLU_RS30450	0.80	-0.3
1,490,217	-		PFLU_RS30450	0.80	-2.1
1,490,217	-		PFLU_RS30450	0.80	+1.1
1,490,217	-		PFLU_RS30450	0.80	+0.7
1,490,217	-		PFLU_RS30450	0.80	+0.5
1,490,217	-		PFLU_RS30450	0.80	+1.5
1,490,217	-		PFLU_RS30450	0.80	-1.5
1,490,217	-		PFLU_RS30450	0.80	-0.7
1,490,262	+				+3.5
1,490,262	+				-2.2
1,490,263	-				-0.5
1,490,263	-				-0.5
1,490,263	-				+0.5
1,490,263	-				+0.5
1,490,268	+				+0.1
1,490,268	+				+1.1
1,490,268	+				+0.2
1,490,268	+				-1.1
1,490,268	+				-1.7
1,490,269	-				-0.3
1,490,269	-				+1.9
1,490,269	-				-2.2
1,490,269	-				-1.5
1,490,269	-				-0.6
1,490,269	-				+1.7
1,490,461	+		PFLU_RS06670	0.13	-1.3
1,490,461	+		PFLU_RS06670	0.13	+1.2
1,490,461	+		PFLU_RS06670	0.13	-0.9
1,490,462	-		PFLU_RS06670	0.13	-0.6
1,490,462	-		PFLU_RS06670	0.13	-1.8
1,490,462	-		PFLU_RS06670	0.13	+1.4
1,490,462	-		PFLU_RS06670	0.13	-0.3
1,490,632	+		PFLU_RS06670	0.26	+1.3
1,490,633	-		PFLU_RS06670	0.26	+0.2
1,490,633	-		PFLU_RS06670	0.26	-0.5
1,490,839	+		PFLU_RS06670	0.41	+0.9
1,490,839	+		PFLU_RS06670	0.41	+0.2
1,490,839	+		PFLU_RS06670	0.41	-1.1
1,490,839	+		PFLU_RS06670	0.41	+0.2
1,490,839	+		PFLU_RS06670	0.41	-1.6
1,490,839	+		PFLU_RS06670	0.41	+2.5
1,490,839	+		PFLU_RS06670	0.41	-0.2
1,490,839	+		PFLU_RS06670	0.41	+0.7
1,490,839	+		PFLU_RS06670	0.41	+0.3
1,490,839	+		PFLU_RS06670	0.41	-0.9
1,490,839	+		PFLU_RS06670	0.41	+0.5
1,490,839	+		PFLU_RS06670	0.41	+0.5
1,490,839	+		PFLU_RS06670	0.41	-0.4
1,490,839	+		PFLU_RS06670	0.41	+4.3
1,490,839	+		PFLU_RS06670	0.41	+0.7
1,490,839	+		PFLU_RS06670	0.41	+1.7
1,490,839	+		PFLU_RS06670	0.41	+1.8
1,490,839	+		PFLU_RS06670	0.41	+1.9
1,490,839	+		PFLU_RS06670	0.41	+0.2
1,490,840	-		PFLU_RS06670	0.41	-0.3
1,490,840	-		PFLU_RS06670	0.41	-1.9
1,490,840	-		PFLU_RS06670	0.41	-2.1
1,490,840	-		PFLU_RS06670	0.41	-0.1
1,490,840	-		PFLU_RS06670	0.41	-1.6
1,490,840	-		PFLU_RS06670	0.41	-0.1
1,490,840	-		PFLU_RS06670	0.41	-1.3
1,490,840	-		PFLU_RS06670	0.41	-3.1
1,490,840	-		PFLU_RS06670	0.41	-0.5
1,490,840	-		PFLU_RS06670	0.41	-3.3
1,490,840	-		PFLU_RS06670	0.41	-3.5
1,490,840	-		PFLU_RS06670	0.41	+1.5
1,490,840	-		PFLU_RS06670	0.41	+0.1
1,490,840	-		PFLU_RS06670	0.41	-2.3
1,490,840	-		PFLU_RS06670	0.41	-1.3
1,490,840	-		PFLU_RS06670	0.41	-2.8
1,490,840	-		PFLU_RS06670	0.41	-0.2
1,490,840	-		PFLU_RS06670	0.41	-0.2
1,490,840	-		PFLU_RS06670	0.41	-1.2
1,490,841	+		PFLU_RS06670	0.41	+1.1
1,490,841	+		PFLU_RS06670	0.41	+0.1
1,490,980	+		PFLU_RS06670	0.52	+0.4
1,490,980	+		PFLU_RS06670	0.52	+2.2
1,490,980	+		PFLU_RS06670	0.52	-2.0
1,490,980	+		PFLU_RS06670	0.52	-3.1
1,490,980	+		PFLU_RS06670	0.52	-0.4
1,490,980	+		PFLU_RS06670	0.52	+0.1
1,490,981	-		PFLU_RS06670	0.52	+1.1
1,490,981	-		PFLU_RS06670	0.52	+0.4
1,490,981	-		PFLU_RS06670	0.52	-0.0
1,490,981	-		PFLU_RS06670	0.52	-1.0
1,490,981	-		PFLU_RS06670	0.52	-0.5
1,490,981	-		PFLU_RS06670	0.52	-1.9
1,491,019	+		PFLU_RS06670	0.55	+1.3
1,491,020	-		PFLU_RS06670	0.55	+2.4