Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28555

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,352,668	+		PFLU_RS28545	0.82	+0.7
6,352,668	+		PFLU_RS28545	0.82	+0.9
6,352,669	-		PFLU_RS28545	0.82	+3.2
6,352,669	-		PFLU_RS28545	0.82	-1.0
6,352,669	-		PFLU_RS28545	0.82	-1.2
6,352,764	+				-2.3
6,352,764	+				-1.0
6,352,764	+				+0.9
6,352,764	+				-1.9
6,352,764	+				+1.5
6,352,764	+				+2.2
6,352,765	-				-1.1
6,352,765	-				+1.5
6,352,765	-				+1.2
6,352,765	-				-1.5
6,352,765	-				+0.4
6,352,765	-				+1.5
6,352,765	-				+0.8
6,352,790	-				+1.0
6,352,790	-				-1.0
6,352,812	+				-1.2
6,352,884	+				+1.5
6,352,884	+				+1.4
6,352,884	+				-0.7
6,352,884	+				+1.1
6,352,884	+				-1.6
6,352,884	+				-1.9
6,352,885	-				-1.4
6,352,885	-				+0.1
6,352,885	-				+0.4
6,352,885	-				+1.4
6,352,885	-				-3.4
6,352,885	-				-0.8
6,352,885	-				-0.3
6,352,885	-				+2.4
6,352,885	-				+1.1
6,352,920	+		PFLU_RS28550	0.15	-0.6
6,352,921	-		PFLU_RS28550	0.16	-0.1
6,352,968	+		PFLU_RS28550	0.24	+1.0
6,352,989	+		PFLU_RS28550	0.28	+1.3
6,352,989	+		PFLU_RS28550	0.28	-1.5
6,352,989	+		PFLU_RS28550	0.28	+2.0
6,352,990	-		PFLU_RS28550	0.28	+1.2
6,352,990	-		PFLU_RS28550	0.28	-0.6
6,352,990	-		PFLU_RS28550	0.28	-2.2
6,352,990	-		PFLU_RS28550	0.28	-2.1
6,352,990	-		PFLU_RS28550	0.28	+0.9
6,352,990	-		PFLU_RS28550	0.28	-0.6
6,352,990	-		PFLU_RS28550	0.28	-1.8
6,352,990	-		PFLU_RS28550	0.28	+0.3
6,352,990	-		PFLU_RS28550	0.28	+0.6
6,353,061	+		PFLU_RS28550	0.42	-3.4
6,353,176	+		PFLU_RS28550	0.63	-1.6
6,353,176	+		PFLU_RS28550	0.63	-1.6
6,353,177	-		PFLU_RS28550	0.63	+0.3
6,353,377	+				+0.8
6,353,377	+				-2.3
6,353,377	+				-0.7
6,353,377	+				+0.5
6,353,377	+				-3.4
6,353,377	+				+0.5
6,353,378	-				-2.0
6,353,378	-				+0.5
6,353,378	-				+1.4
6,353,416	+				-1.0
6,353,450	+				-0.5
6,353,450	+				-1.3
6,353,450	+				+0.4
6,353,450	+				+0.1
6,353,451	-				+3.5
6,353,451	-				-1.9
6,353,451	-				-1.1
6,353,451	-				-1.0
6,353,451	-				-0.8
6,353,451	-				+0.4
6,353,451	-				-1.9
6,353,451	-				-3.1
6,353,451	-				-1.8
6,353,483	+				-3.8
6,353,483	+				-1.0
6,353,483	+				-1.9
6,353,483	+				-1.9
6,353,483	+				+0.0
6,353,483	+				+1.1
6,353,483	+				-0.9
6,353,483	+				-2.0
6,353,484	-				+1.0
6,353,484	-				-1.9
6,353,484	-				+0.1
6,353,484	-				+0.2
6,353,484	-				-2.4
6,353,484	-				+1.1
6,353,487	+				-1.0
6,353,569	+				+0.2
6,353,700	+		PFLU_RS28555	0.11	-1.6
6,353,700	+		PFLU_RS28555	0.11	+0.8
6,353,700	+		PFLU_RS28555	0.11	-0.6
6,353,700	+		PFLU_RS28555	0.11	+0.2
6,353,700	+		PFLU_RS28555	0.11	-0.0
6,353,700	+		PFLU_RS28555	0.11	-1.2
6,353,700	+		PFLU_RS28555	0.11	+0.7
6,353,700	+		PFLU_RS28555	0.11	-0.7
6,353,700	+		PFLU_RS28555	0.11	-2.5
6,353,700	+		PFLU_RS28555	0.11	-2.0
6,353,700	+		PFLU_RS28555	0.11	+1.3
6,353,700	+		PFLU_RS28555	0.11	+2.6
6,353,700	+		PFLU_RS28555	0.11	+1.0
6,353,700	+		PFLU_RS28555	0.11	+0.5
6,353,700	+		PFLU_RS28555	0.11	-2.9
6,353,700	+		PFLU_RS28555	0.11	-1.4
6,353,700	+		PFLU_RS28555	0.11	-0.7
6,353,700	+		PFLU_RS28555	0.11	-2.4
6,353,701	-		PFLU_RS28555	0.11	-0.5
6,353,701	-		PFLU_RS28555	0.11	+2.0
6,353,701	-		PFLU_RS28555	0.11	-1.0
6,353,701	-		PFLU_RS28555	0.11	-0.3
6,353,701	-		PFLU_RS28555	0.11	-0.0
6,353,701	-		PFLU_RS28555	0.11	+0.6
6,353,701	-		PFLU_RS28555	0.11	-2.3
6,353,701	-		PFLU_RS28555	0.11	-1.3
6,353,701	-		PFLU_RS28555	0.11	+1.6
6,353,701	-		PFLU_RS28555	0.11	-2.3
6,353,701	-		PFLU_RS28555	0.11	-1.3
6,353,701	-		PFLU_RS28555	0.11	+1.1
6,353,701	-		PFLU_RS28555	0.11	-0.3
6,353,701	-		PFLU_RS28555	0.11	+0.8
6,353,701	-		PFLU_RS28555	0.11	+0.1
6,353,701	-		PFLU_RS28555	0.11	+1.5
6,353,701	-		PFLU_RS28555	0.11	-0.9
6,353,701	-		PFLU_RS28555	0.11	-0.4
6,353,701	-		PFLU_RS28555	0.11	-0.3
6,353,701	-		PFLU_RS28555	0.11	+0.7
6,353,769	+		PFLU_RS28555	0.17	+0.2
6,353,769	+		PFLU_RS28555	0.17	-3.0
6,353,770	-		PFLU_RS28555	0.17	+0.8
6,353,770	-		PFLU_RS28555	0.17	+1.2
6,353,770	-		PFLU_RS28555	0.17	-0.9
6,353,770	-		PFLU_RS28555	0.17	+1.2
6,353,829	+		PFLU_RS28555	0.23	+2.2
6,353,829	+		PFLU_RS28555	0.23	+1.8
6,353,829	+		PFLU_RS28555	0.23	+1.0
6,353,829	+		PFLU_RS28555	0.23	+0.0
6,353,829	+		PFLU_RS28555	0.23	-1.3
6,353,829	+		PFLU_RS28555	0.23	-1.6
6,353,830	-		PFLU_RS28555	0.23	-0.3
6,353,830	-		PFLU_RS28555	0.23	-0.6
6,353,830	-		PFLU_RS28555	0.23	+0.5
6,353,830	-		PFLU_RS28555	0.23	+0.1
6,353,830	-		PFLU_RS28555	0.23	-2.1
6,353,830	-		PFLU_RS28555	0.23	-1.7
6,353,830	-		PFLU_RS28555	0.23	+0.8
6,353,830	-		PFLU_RS28555	0.23	+1.0
6,353,830	-		PFLU_RS28555	0.23	-1.3
6,353,830	-		PFLU_RS28555	0.23	-0.9
6,353,883	+		PFLU_RS28555	0.28	+0.8
6,353,883	+		PFLU_RS28555	0.28	-0.6
6,353,883	+		PFLU_RS28555	0.28	-0.1
6,353,903	+		PFLU_RS28555	0.30	+0.6
6,353,903	+		PFLU_RS28555	0.30	-0.6
6,353,904	-		PFLU_RS28555	0.30	-3.5
6,353,904	-		PFLU_RS28555	0.30	+1.4
6,353,904	-		PFLU_RS28555	0.30	+0.6
6,353,922	+		PFLU_RS28555	0.32	-2.0
6,353,922	+		PFLU_RS28555	0.32	+1.2
6,353,923	-		PFLU_RS28555	0.32	-1.8
6,353,923	-		PFLU_RS28555	0.32	-1.0
6,353,923	-		PFLU_RS28555	0.32	-1.9
6,353,923	-		PFLU_RS28555	0.32	+0.7
6,354,024	+		PFLU_RS28555	0.41	+1.0
6,354,024	+		PFLU_RS28555	0.41	+2.2
6,354,024	+		PFLU_RS28555	0.41	+0.4
6,354,025	-		PFLU_RS28555	0.42	+0.9
6,354,025	-		PFLU_RS28555	0.42	+0.3
6,354,025	-		PFLU_RS28555	0.42	-1.3
6,354,025	-		PFLU_RS28555	0.42	+0.7
6,354,025	-		PFLU_RS28555	0.42	-0.8
6,354,025	-		PFLU_RS28555	0.42	+0.4
6,354,030	+		PFLU_RS28555	0.42	-3.1
6,354,030	+		PFLU_RS28555	0.42	+1.0
6,354,030	+		PFLU_RS28555	0.42	-0.8
6,354,030	+		PFLU_RS28555	0.42	+0.8
6,354,030	+		PFLU_RS28555	0.42	-1.6
6,354,030	+		PFLU_RS28555	0.42	+0.7
6,354,031	-		PFLU_RS28555	0.42	+2.1
6,354,031	-		PFLU_RS28555	0.42	+1.9
6,354,031	-		PFLU_RS28555	0.42	-0.3
6,354,031	-		PFLU_RS28555	0.42	+1.1
6,354,087	+		PFLU_RS28555	0.47	-1.6
6,354,087	+		PFLU_RS28555	0.47	-1.0
6,354,087	+		PFLU_RS28555	0.47	-1.3
6,354,087	+		PFLU_RS28555	0.47	+0.3
6,354,087	+		PFLU_RS28555	0.47	-2.1
6,354,087	+		PFLU_RS28555	0.47	-2.3
6,354,087	+		PFLU_RS28555	0.47	+0.2
6,354,087	+		PFLU_RS28555	0.47	-0.7
6,354,087	+		PFLU_RS28555	0.47	+0.5
6,354,087	+		PFLU_RS28555	0.47	-1.6
6,354,087	+		PFLU_RS28555	0.47	+1.0
6,354,087	+		PFLU_RS28555	0.47	-0.9
6,354,087	+		PFLU_RS28555	0.47	-0.3
6,354,087	+		PFLU_RS28555	0.47	+1.6
6,354,087	+		PFLU_RS28555	0.47	-0.1
6,354,088	-		PFLU_RS28555	0.47	-0.0
6,354,088	-		PFLU_RS28555	0.47	-0.2
6,354,088	-		PFLU_RS28555	0.47	-1.7
6,354,088	-		PFLU_RS28555	0.47	-1.7
6,354,088	-		PFLU_RS28555	0.47	-0.6
6,354,088	-		PFLU_RS28555	0.47	-0.5
6,354,088	-		PFLU_RS28555	0.47	-0.2
6,354,088	-		PFLU_RS28555	0.47	+0.7
6,354,088	-		PFLU_RS28555	0.47	+0.3
6,354,088	-		PFLU_RS28555	0.47	-0.5
6,354,088	-		PFLU_RS28555	0.47	+1.3
6,354,088	-		PFLU_RS28555	0.47	-0.7
6,354,088	-		PFLU_RS28555	0.47	+1.4
6,354,088	-		PFLU_RS28555	0.47	-2.9
6,354,088	-		PFLU_RS28555	0.47	+0.3
6,354,088	-		PFLU_RS28555	0.47	+1.0
6,354,088	-		PFLU_RS28555	0.47	-1.0
6,354,088	-		PFLU_RS28555	0.47	+0.4
6,354,120	+		PFLU_RS28555	0.51	-1.4
6,354,193	-		PFLU_RS28555	0.57	+1.3
6,354,193	-		PFLU_RS28555	0.57	-1.4
6,354,327	+		PFLU_RS28555	0.70	+0.7
6,354,327	+		PFLU_RS28555	0.70	-0.5
6,354,327	+		PFLU_RS28555	0.70	+0.2
6,354,327	+		PFLU_RS28555	0.70	-2.3
6,354,327	+		PFLU_RS28555	0.70	+1.6
6,354,327	+		PFLU_RS28555	0.70	+0.5
6,354,327	+		PFLU_RS28555	0.70	-2.3
6,354,327	+		PFLU_RS28555	0.70	+3.4
6,354,328	-		PFLU_RS28555	0.70	+0.0
6,354,328	-		PFLU_RS28555	0.70	+2.3
6,354,328	-		PFLU_RS28555	0.70	+1.0
6,354,328	-		PFLU_RS28555	0.70	-0.6
6,354,328	-		PFLU_RS28555	0.70	+2.3
6,354,328	-		PFLU_RS28555	0.70	-0.9
6,354,328	-		PFLU_RS28555	0.70	+0.3
6,354,328	-		PFLU_RS28555	0.70	-1.8
6,354,328	-		PFLU_RS28555	0.70	+0.5
6,354,328	-		PFLU_RS28555	0.70	-1.2
6,354,328	-		PFLU_RS28555	0.70	+0.5
6,354,328	-		PFLU_RS28555	0.70	-0.1
6,354,328	-		PFLU_RS28555	0.70	-0.0
6,354,328	-		PFLU_RS28555	0.70	+0.2
6,354,328	-		PFLU_RS28555	0.70	+1.5
6,354,328	-		PFLU_RS28555	0.70	+0.4
6,354,330	+		PFLU_RS28555	0.70	-2.3
6,354,330	+		PFLU_RS28555	0.70	-1.0
6,354,330	+		PFLU_RS28555	0.70	+1.0
6,354,331	-		PFLU_RS28555	0.70	+0.5
6,354,331	-		PFLU_RS28555	0.70	+1.1
6,354,331	-		PFLU_RS28555	0.70	+0.4
6,354,331	-		PFLU_RS28555	0.70	-0.0
6,354,331	-		PFLU_RS28555	0.70	+0.0
6,354,350	-		PFLU_RS28555	0.72	+0.1
6,354,350	-		PFLU_RS28555	0.72	-0.1
6,354,376	+		PFLU_RS28555	0.75	-0.2
6,354,376	+		PFLU_RS28555	0.75	+0.3
6,354,376	+		PFLU_RS28555	0.75	+1.1
6,354,376	+		PFLU_RS28555	0.75	+1.7
6,354,376	+		PFLU_RS28555	0.75	-0.8
6,354,376	+		PFLU_RS28555	0.75	+2.3
6,354,376	+		PFLU_RS28555	0.75	+0.6
6,354,377	-		PFLU_RS28555	0.75	+1.1
6,354,377	-		PFLU_RS28555	0.75	+0.4
6,354,432	+		PFLU_RS28555	0.80	-0.4
6,354,432	+		PFLU_RS28555	0.80	-3.0
6,354,432	+		PFLU_RS28555	0.80	-0.4
6,354,432	+		PFLU_RS28555	0.80	+0.8
6,354,432	+		PFLU_RS28555	0.80	-1.9
6,354,433	-		PFLU_RS28555	0.80	+1.4
6,354,433	-		PFLU_RS28555	0.80	+0.5
6,354,433	-		PFLU_RS28555	0.80	+0.8
6,354,433	-		PFLU_RS28555	0.80	-2.3
6,354,433	-		PFLU_RS28555	0.80	-2.9
6,354,433	-		PFLU_RS28555	0.80	-1.5
6,354,433	-		PFLU_RS28555	0.80	+1.3
6,354,433	-		PFLU_RS28555	0.80	+0.9
6,354,433	-		PFLU_RS28555	0.80	+0.6
6,354,499	+		PFLU_RS28555	0.86	+1.0
6,354,624	-				+1.5
6,354,643	+				+0.6
6,354,644	-				+2.5
6,354,718	+				-0.4
6,354,765	+				-0.0
6,354,802	+				+1.1
6,354,812	+				+0.2
6,354,812	+				-1.1
6,354,813	-				+1.0
6,354,825	+				+1.4
6,354,825	+				-2.7
6,354,826	-				+2.0
6,354,911	+				+0.8
6,354,911	+				+1.8
6,354,912	-				-0.9
6,354,912	-				-1.3
6,354,912	-				+2.0
6,355,036	+		PFLU_RS28560	0.11	+1.0
6,355,036	+		PFLU_RS28560	0.11	+2.3
6,355,099	+		PFLU_RS28560	0.15	-1.2
6,355,100	-		PFLU_RS28560	0.15	+1.4
6,355,103	+		PFLU_RS28560	0.16	+1.9
6,355,103	+		PFLU_RS28560	0.16	-0.6
6,355,103	+		PFLU_RS28560	0.16	-0.7
6,355,103	+		PFLU_RS28560	0.16	-1.0
6,355,103	+		PFLU_RS28560	0.16	+1.0
6,355,103	+		PFLU_RS28560	0.16	+0.7
6,355,103	+		PFLU_RS28560	0.16	+2.7
6,355,103	+		PFLU_RS28560	0.16	-2.0
6,355,104	-		PFLU_RS28560	0.16	-3.4
6,355,104	-		PFLU_RS28560	0.16	-1.1
6,355,104	-		PFLU_RS28560	0.16	-1.5
6,355,104	-		PFLU_RS28560	0.16	-0.3
6,355,104	-		PFLU_RS28560	0.16	+0.3
6,355,104	-		PFLU_RS28560	0.16	-0.7
6,355,104	-		PFLU_RS28560	0.16	+0.1
6,355,104	-		PFLU_RS28560	0.16	+3.0
6,355,104	-		PFLU_RS28560	0.16	+0.6
6,355,137	-		PFLU_RS28560	0.18	-0.2
6,355,345	+		PFLU_RS28560	0.33	+0.3
6,355,345	+		PFLU_RS28560	0.33	-1.3
6,355,346	-		PFLU_RS28560	0.33	-1.3
6,355,600	+		PFLU_RS28560	0.51	+0.5