Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21675

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
4,883,959	+		PFLU_RS21670	0.37	-0.1
4,883,959	+		PFLU_RS21670	0.37	+0.9
4,883,959	+		PFLU_RS21670	0.37	+0.9
4,883,960	-		PFLU_RS21670	0.37	+0.1
4,883,960	-		PFLU_RS21670	0.37	-0.9
4,883,960	-		PFLU_RS21670	0.37	+1.3
4,884,050	+		PFLU_RS21670	0.44	+1.8
4,884,062	+		PFLU_RS21670	0.45	-0.9
4,884,062	+		PFLU_RS21670	0.45	+1.0
4,884,062	+		PFLU_RS21670	0.45	+1.6
4,884,062	+		PFLU_RS21670	0.45	+2.5
4,884,062	+		PFLU_RS21670	0.45	+1.7
4,884,062	+		PFLU_RS21670	0.45	-0.2
4,884,062	+		PFLU_RS21670	0.45	-0.9
4,884,062	+		PFLU_RS21670	0.45	-1.7
4,884,062	+		PFLU_RS21670	0.45	+0.9
4,884,062	+		PFLU_RS21670	0.45	-0.1
4,884,063	-		PFLU_RS21670	0.45	-1.7
4,884,063	-		PFLU_RS21670	0.45	-1.4
4,884,063	-		PFLU_RS21670	0.45	-0.0
4,884,063	-		PFLU_RS21670	0.45	+0.8
4,884,063	-		PFLU_RS21670	0.45	+1.5
4,884,063	-		PFLU_RS21670	0.45	-3.1
4,884,063	-		PFLU_RS21670	0.45	-2.2
4,884,063	-		PFLU_RS21670	0.45	+2.3
4,884,063	-		PFLU_RS21670	0.45	+1.9
4,884,063	-		PFLU_RS21670	0.45	-0.5
4,884,063	-		PFLU_RS21670	0.45	+0.6
4,884,063	-		PFLU_RS21670	0.45	-0.4
4,884,063	-		PFLU_RS21670	0.45	-0.7
4,884,650	+		PFLU_RS21670	0.90	-0.7
4,884,650	+		PFLU_RS21670	0.90	+4.1
4,884,650	+		PFLU_RS21670	0.90	-0.7
4,884,651	-		PFLU_RS21670	0.90	-1.7
4,884,651	-		PFLU_RS21670	0.90	-0.4
4,884,651	-		PFLU_RS21670	0.90	+2.6
4,884,651	-		PFLU_RS21670	0.90	+1.3
4,884,688	-				-0.5
4,884,757	-				+1.3
4,884,777	+				+0.4
4,884,777	+				-0.4
4,884,814	+				+0.3
4,885,065	+		PFLU_RS21675	0.12	+0.2
4,885,066	-		PFLU_RS21675	0.13	-0.3
4,885,066	-		PFLU_RS21675	0.13	-0.3
4,885,075	+		PFLU_RS21675	0.13	-0.7
4,885,075	+		PFLU_RS21675	0.13	+2.3
4,885,076	-		PFLU_RS21675	0.13	+1.0
4,885,076	-		PFLU_RS21675	0.13	+0.7
4,885,129	+		PFLU_RS21675	0.15	+0.1
4,885,129	+		PFLU_RS21675	0.15	+0.2
4,885,129	+		PFLU_RS21675	0.15	-1.5
4,885,130	-		PFLU_RS21675	0.16	-1.1
4,885,130	-		PFLU_RS21675	0.16	-2.6
4,885,130	-		PFLU_RS21675	0.16	+0.1
4,885,130	-		PFLU_RS21675	0.16	+2.3
4,885,130	-		PFLU_RS21675	0.16	+0.8
4,885,192	-		PFLU_RS21675	0.18	+0.3
4,885,192	-		PFLU_RS21675	0.18	-0.1
4,885,192	-		PFLU_RS21675	0.18	+0.3
4,885,412	+		PFLU_RS21675	0.29	-3.1
4,885,412	+		PFLU_RS21675	0.29	-0.6
4,885,425	+		PFLU_RS21675	0.29	+1.6
4,885,426	-		PFLU_RS21675	0.29	-0.8
4,885,465	-		PFLU_RS21675	0.31	-1.4
4,885,465	-		PFLU_RS21675	0.31	-0.4
4,885,466	+		PFLU_RS21675	0.31	+2.7
4,885,467	-		PFLU_RS21675	0.31	-2.4
4,885,604	+		PFLU_RS21675	0.38	-2.9
4,885,604	+		PFLU_RS21675	0.38	+1.1
4,885,649	+		PFLU_RS21675	0.40	-0.4
4,885,955	+		PFLU_RS21675	0.54	+0.6
4,885,955	+		PFLU_RS21675	0.54	+2.5
4,885,955	+		PFLU_RS21675	0.54	+0.1
4,885,956	-		PFLU_RS21675	0.54	-1.7
4,885,956	-		PFLU_RS21675	0.54	+0.3
4,886,177	-		PFLU_RS21675	0.65	-0.5
4,886,204	+		PFLU_RS21675	0.66	-1.2
4,886,204	+		PFLU_RS21675	0.66	+1.1
4,886,204	+		PFLU_RS21675	0.66	-0.3
4,886,205	-		PFLU_RS21675	0.66	+1.5
4,886,232	+		PFLU_RS21675	0.67	-1.6
4,886,345	+		PFLU_RS21675	0.73	+0.3
4,886,346	-		PFLU_RS21675	0.73	-1.6
4,886,386	-		PFLU_RS21675	0.75	-2.2
4,886,386	-		PFLU_RS21675	0.75	-1.5
4,886,561	+		PFLU_RS21675	0.83	-1.2
4,886,561	+		PFLU_RS21675	0.83	-1.4
4,886,561	+		PFLU_RS21675	0.83	+0.6
4,886,561	+		PFLU_RS21675	0.83	-2.3
4,886,561	+		PFLU_RS21675	0.83	-1.0
4,886,561	+		PFLU_RS21675	0.83	-0.4
4,886,561	+		PFLU_RS21675	0.83	-0.5
4,886,561	+		PFLU_RS21675	0.83	+0.2
4,886,561	+		PFLU_RS21675	0.83	+0.3
4,886,561	+		PFLU_RS21675	0.83	+1.1
4,886,561	+		PFLU_RS21675	0.83	+1.1
4,886,561	+		PFLU_RS21675	0.83	-3.2
4,886,561	+		PFLU_RS21675	0.83	-0.5
4,886,561	+		PFLU_RS21675	0.83	-0.4
4,886,561	+		PFLU_RS21675	0.83	-2.0
4,886,561	+		PFLU_RS21675	0.83	-0.8
4,886,561	+		PFLU_RS21675	0.83	-3.4
4,886,562	-		PFLU_RS21675	0.83	-2.3
4,886,562	-		PFLU_RS21675	0.83	-1.5
4,886,562	-		PFLU_RS21675	0.83	-1.1
4,886,562	-		PFLU_RS21675	0.83	-1.6
4,886,562	-		PFLU_RS21675	0.83	+0.2
4,886,562	-		PFLU_RS21675	0.83	+0.1
4,886,562	-		PFLU_RS21675	0.83	+2.0
4,886,562	-		PFLU_RS21675	0.83	-0.1
4,886,562	-		PFLU_RS21675	0.83	-0.6
4,886,562	-		PFLU_RS21675	0.83	-2.8
4,886,562	-		PFLU_RS21675	0.83	-2.0
4,886,562	-		PFLU_RS21675	0.83	-0.5
4,886,562	-		PFLU_RS21675	0.83	-1.2
4,886,562	-		PFLU_RS21675	0.83	-0.2
4,886,562	-		PFLU_RS21675	0.83	-0.4
4,886,562	-		PFLU_RS21675	0.83	-1.7
4,886,562	-		PFLU_RS21675	0.83	-0.2
4,886,565	+		PFLU_RS21675	0.83	-1.1
4,886,566	-		PFLU_RS21675	0.83	+0.2
4,886,566	-		PFLU_RS21675	0.83	+0.3
4,886,935	+				+3.2
4,887,076	-				-1.1
4,887,076	-				-0.1
4,887,104	+				-0.8
4,887,104	+				+1.6
4,887,104	+				+1.7
4,887,104	+				+2.6
4,887,105	-				-1.4
4,887,105	-				+2.4
4,887,120	+				+0.7
4,887,120	+				+0.6
4,887,120	+				+1.5
4,887,120	+				+0.8
4,887,120	+				+0.2
4,887,120	+				+1.7
4,887,120	+				+0.5
4,887,120	+				+0.9
4,887,121	-				+0.2
4,887,121	-				+3.0
4,887,121	-				-1.1
4,887,121	-				-1.4
4,887,121	-				-0.6
4,887,121	-				+1.3
4,887,121	-				+1.3
4,887,121	-				+0.6
4,887,121	-				-1.5
4,887,121	-				-1.4
4,887,121	-				-2.4
4,887,121	-				+1.3
4,887,121	-				+1.0
4,887,121	-				+1.2
4,887,124	+				+0.3
4,887,124	+				-1.9
4,887,124	+				-0.4
4,887,124	+				+0.5
4,887,124	+				+0.4
4,887,124	+				-2.6
4,887,124	+				+0.2
4,887,124	+				+0.3
4,887,124	+				+1.7
4,887,125	-				+1.9
4,887,125	-				+1.5
4,887,125	-				+0.2
4,887,125	-				-2.5
4,887,125	-				+0.4
4,887,229	-				+1.2
4,887,244	+				-1.1
4,887,244	+				-2.3
4,887,244	+				+1.3
4,887,244	+				+0.6
4,887,245	-				-1.9
4,887,253	+				-0.9
4,887,254	-				-0.2
4,887,254	-				+1.1
4,887,295	+				+0.7
4,887,295	+				+0.7
4,887,295	+				+0.3
4,887,296	-				-3.1
4,887,296	-				+2.2
4,887,296	-				+2.8
4,887,342	+				+1.0
4,887,343	-				+0.8
4,887,349	+				-1.2
4,887,349	+				-1.4
4,887,349	+				-2.5
4,887,349	+				+1.0
4,887,349	+				-1.2
4,887,349	+				+1.3
4,887,349	+				-1.7
4,887,350	-				-0.4
4,887,350	-				+0.5
4,887,350	-				+0.1
4,887,350	-				-0.4
4,887,362	+				-0.8
4,887,363	-				-2.0
4,887,363	-				+0.9
4,887,393	-				+0.5
4,887,479	+				-0.2
4,887,479	+				-2.0
4,887,479	+				+1.4
4,887,479	+				-0.7
4,887,479	+				-2.0
4,887,479	+				-0.3
4,887,479	+				-3.3
4,887,480	-				+2.1
4,887,480	-				+0.4
4,887,480	-				+0.7
4,887,480	-				+1.2
4,887,480	-				+0.6
4,887,480	-				+0.2
4,887,480	-				-1.7
4,887,480	-				+1.2
4,887,787	+				+1.4
4,887,787	+				+0.0
4,887,787	+				+0.5
4,887,787	+				+0.3
4,887,788	-				-0.7
4,887,788	-				+2.2
4,887,788	-				+1.1
4,887,788	-				-1.5
4,887,907	+		PFLU_RS21685	0.61	-1.4
4,887,907	+		PFLU_RS21685	0.61	-3.0
4,887,907	+		PFLU_RS21685	0.61	+0.9
4,887,907	+		PFLU_RS21685	0.61	-2.0
4,887,907	+		PFLU_RS21685	0.61	-2.5
4,887,907	+		PFLU_RS21685	0.61	+0.1
4,887,907	+		PFLU_RS21685	0.61	+3.1
4,887,907	+		PFLU_RS21685	0.61	-0.7
4,887,907	+		PFLU_RS21685	0.61	+1.1
4,887,907	+		PFLU_RS21685	0.61	+0.8
4,887,907	+		PFLU_RS21685	0.61	-1.4
4,887,907	+		PFLU_RS21685	0.61	+0.6
4,887,907	+		PFLU_RS21685	0.61	+0.1
4,887,907	+		PFLU_RS21685	0.61	+2.5
4,887,907	+		PFLU_RS21685	0.61	-2.7
4,887,907	+		PFLU_RS21685	0.61	-0.9
4,887,907	+		PFLU_RS21685	0.61	-1.1
4,887,907	+		PFLU_RS21685	0.61	-0.8
4,887,907	+		PFLU_RS21685	0.61	+1.8
4,887,907	+		PFLU_RS21685	0.61	+0.1
4,887,908	-		PFLU_RS21685	0.62	+0.1
4,887,908	-		PFLU_RS21685	0.62	+0.9
4,887,908	-		PFLU_RS21685	0.62	-0.1
4,887,908	-		PFLU_RS21685	0.62	+0.6
4,887,908	-		PFLU_RS21685	0.62	+1.7
4,887,908	-		PFLU_RS21685	0.62	-1.5
4,887,908	-		PFLU_RS21685	0.62	+0.8
4,887,908	-		PFLU_RS21685	0.62	+0.1
4,887,908	-		PFLU_RS21685	0.62	+0.8
4,887,908	-		PFLU_RS21685	0.62	+0.1
4,887,908	-		PFLU_RS21685	0.62	+1.6
4,887,908	-		PFLU_RS21685	0.62	-0.3