Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS20605

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
4,642,507	+		PFLU_RS31715	0.11	+1.2
4,642,507	+		PFLU_RS31715	0.11	+1.1
4,642,610	+		PFLU_RS31715	0.32	-0.6
4,642,610	+		PFLU_RS31715	0.32	-0.7
4,642,610	+		PFLU_RS31715	0.32	-2.2
4,642,610	+		PFLU_RS31715	0.32	+1.0
4,642,611	-		PFLU_RS31715	0.32	+0.9
4,642,620	+		PFLU_RS31715	0.34	-1.5
4,642,776	+		PFLU_RS31715	0.65	+1.0
4,642,777	-		PFLU_RS31715	0.65	+1.4
4,642,793	+		PFLU_RS31715	0.69	-2.2
4,642,793	+		PFLU_RS31715	0.69	+1.7
4,642,794	-		PFLU_RS31715	0.69	+1.1
4,642,794	-		PFLU_RS31715	0.69	+0.9
4,642,794	-		PFLU_RS31715	0.69	-0.5
4,642,912	+				-0.7
4,642,912	+				-2.1
4,642,912	+				+0.2
4,642,912	+				+1.3
4,642,912	+				-1.5
4,642,913	-				-1.9
4,642,913	-				-0.3
4,642,913	-				-1.2
4,642,913	-				-0.7
4,642,979	+				-0.2
4,642,979	+				+1.7
4,642,979	+				-0.5
4,642,979	+				+1.1
4,642,979	+				-1.0
4,642,979	+				+1.7
4,642,979	+				+1.6
4,642,980	-				-2.2
4,642,980	-				+1.1
4,642,980	-				-0.4
4,643,034	-				-1.6
4,643,040	-				+0.9
4,643,087	+				+0.7
4,643,087	+				+0.9
4,643,088	-				+1.0
4,643,088	-				+0.4
4,643,088	-				+0.7
4,643,088	-				+0.6
4,643,088	-				-2.7
4,643,118	+				-0.3
4,643,118	+				+1.2
4,643,119	-				-2.2
4,643,119	-				-0.7
4,643,124	+				+0.6
4,643,124	+				+2.2
4,643,124	+				-0.2
4,643,124	+				-0.6
4,643,124	+				+2.0
4,643,124	+				+0.0
4,643,124	+				-0.3
4,643,124	+				-2.0
4,643,124	+				+1.9
4,643,125	-				+2.4
4,643,125	-				+1.0
4,643,125	-				-0.1
4,643,125	-				+0.6
4,643,125	-				-0.2
4,643,125	-				-1.7
4,643,125	-				-0.4
4,643,125	-				-0.9
4,643,125	-				-1.4
4,643,125	-				+0.3
4,643,154	+				+2.5
4,643,154	+				-2.7
4,643,154	+				-0.3
4,643,155	-				+0.3
4,643,155	-				-0.2
4,643,155	-				+1.9
4,643,208	+				+1.6
4,643,208	+				-0.3
4,643,208	+				-0.6
4,643,208	+				-0.3
4,643,208	+				-0.0
4,643,208	+				+0.4
4,643,208	+				-2.2
4,643,208	+				+2.9
4,643,209	-				-0.6
4,643,209	-				+2.8
4,643,209	-				-1.0
4,643,209	-				-1.9
4,643,209	-				-0.9
4,643,209	-				-0.2
4,643,209	-				-0.8
4,643,247	-				+0.2
4,643,271	+				+1.1
4,643,271	+				+0.3
4,643,271	+				-0.2
4,643,271	+				+0.1
4,643,271	+				-2.6
4,643,271	+				+0.5
4,643,272	-				-2.6
4,643,272	-				+0.3
4,643,272	-				-1.9
4,643,298	+				+1.7
4,643,298	+				-0.2
4,643,298	+				+0.6
4,643,298	+				+1.4
4,643,299	-				-0.4
4,643,299	-				-1.7
4,643,299	-				+0.4
4,643,299	-				-1.9
4,643,299	-				-2.1
4,643,299	-				+1.4
4,643,299	-				-1.9
4,643,303	+				-0.6
4,643,304	-				+1.8
4,643,586	+				+0.1
4,643,586	+				+0.6
4,643,586	+				+0.5
4,643,586	+				+0.1
4,643,586	+				-2.4
4,643,586	+				-1.7
4,643,586	+				+0.7
4,643,586	+				+2.3
4,643,586	+				-1.6
4,643,587	-				+1.4
4,643,587	-				-2.2
4,643,587	-				-0.2
4,644,147	+		PFLU_RS20605	0.42	+3.2
4,644,147	+		PFLU_RS20605	0.42	+2.4
4,644,147	+		PFLU_RS20605	0.42	+0.5
4,644,148	-		PFLU_RS20605	0.42	+1.8
4,644,148	-		PFLU_RS20605	0.42	+3.1
4,644,148	-		PFLU_RS20605	0.42	-1.9
4,644,150	+		PFLU_RS20605	0.42	-2.1
4,644,151	-		PFLU_RS20605	0.42	+1.2
4,644,151	-		PFLU_RS20605	0.42	+1.2
4,644,151	-		PFLU_RS20605	0.42	+1.0
4,644,179	-		PFLU_RS20605	0.44	+2.3
4,644,192	+		PFLU_RS20605	0.45	+0.4
4,644,192	+		PFLU_RS20605	0.45	+2.9
4,644,192	+		PFLU_RS20605	0.45	+0.3
4,644,192	+		PFLU_RS20605	0.45	+0.9
4,644,192	+		PFLU_RS20605	0.45	+1.8
4,644,193	-		PFLU_RS20605	0.45	-0.2
4,644,193	-		PFLU_RS20605	0.45	-1.3
4,644,193	-		PFLU_RS20605	0.45	+1.9
4,644,193	-		PFLU_RS20605	0.45	-0.2
4,644,195	+		PFLU_RS20605	0.45	+1.2
4,644,195	+		PFLU_RS20605	0.45	-1.5
4,644,196	-		PFLU_RS20605	0.45	-2.1
4,644,196	-		PFLU_RS20605	0.45	+1.7
4,644,223	-		PFLU_RS20605	0.47	-3.4
4,644,223	-		PFLU_RS20605	0.47	+0.3
4,644,366	+		PFLU_RS20605	0.56	-1.3
4,644,366	+		PFLU_RS20605	0.56	-1.5
4,644,366	+		PFLU_RS20605	0.56	+1.5
4,644,366	+		PFLU_RS20605	0.56	+1.1
4,644,396	+		PFLU_RS20605	0.58	+0.4
4,644,396	+		PFLU_RS20605	0.58	+1.9
4,644,451	-		PFLU_RS20605	0.61	+1.2
4,644,564	+		PFLU_RS20605	0.68	+0.4
4,644,564	+		PFLU_RS20605	0.68	-1.9
4,644,606	+		PFLU_RS20605	0.71	-2.4
4,644,618	+		PFLU_RS20605	0.72	-2.6
4,644,634	+		PFLU_RS20605	0.73	-0.6
4,644,648	+		PFLU_RS20605	0.74	+0.0
4,644,654	+		PFLU_RS20605	0.74	+0.9
4,644,655	-		PFLU_RS20605	0.74	+0.8
4,644,831	+		PFLU_RS20605	0.85	-1.6
4,644,832	-		PFLU_RS20605	0.85	-0.2
4,644,832	-		PFLU_RS20605	0.85	+0.8
4,644,832	-		PFLU_RS20605	0.85	-2.9
4,644,889	-		PFLU_RS20605	0.89	-1.3
4,644,982	-				+2.4
4,645,057	-				-2.6
4,645,077	-				+0.2
4,645,210	+				-1.0
4,645,240	+				+1.3
4,645,240	+				-0.3
4,645,294	+				+1.0
4,645,294	+				-0.6
4,645,295	-				+0.1
4,645,371	-				-1.5
4,645,375	+				+0.8
4,645,471	-				-0.8
4,645,472	+				-1.3
4,645,541	+				+0.4
4,645,613	+				-1.3
4,645,613	+				+0.8
4,645,613	+				+1.4
4,645,613	+				+0.8
4,645,613	+				-3.3
4,645,613	+				+0.6
4,645,614	-				-1.6
4,645,614	-				-0.9
4,645,614	-				-0.5
4,645,614	-				+0.5
4,645,614	-				+2.3
4,645,615	+				-0.2
4,645,615	+				+0.8
4,645,615	+				-2.9
4,645,615	+				+0.3
4,645,615	+				+0.6
4,645,616	-				-0.1
4,645,616	-				-2.1
4,645,616	-				-0.7
4,645,617	+				+2.4
4,645,617	+				-1.2
4,645,617	+				+1.2
4,645,621	+				-1.5
4,645,627	+				+0.7
4,645,627	+				-0.2
4,645,718	+				+0.8
4,645,718	+				-0.6
4,645,722	+				+1.8
4,645,722	+				+0.5
4,645,723	-				-0.7
4,645,723	-				+0.5
4,645,723	-				+1.5
4,645,723	-				+0.9
4,645,723	-				+0.9
4,645,742	-		PFLU_RS20610	0.12	+1.4
4,645,923	+		PFLU_RS20610	0.30	+0.2
4,645,923	+		PFLU_RS20610	0.30	+1.8
4,645,923	+		PFLU_RS20610	0.30	-3.1
4,645,923	+		PFLU_RS20610	0.30	+0.0
4,645,923	+		PFLU_RS20610	0.30	-0.2
4,645,923	+		PFLU_RS20610	0.30	+0.1
4,645,923	+		PFLU_RS20610	0.30	+0.7
4,645,923	+		PFLU_RS20610	0.30	+3.0
4,645,924	-		PFLU_RS20610	0.30	-0.5
4,645,924	-		PFLU_RS20610	0.30	+0.3
4,645,924	-		PFLU_RS20610	0.30	+1.6
4,645,924	-		PFLU_RS20610	0.30	+0.4
4,645,924	-		PFLU_RS20610	0.30	+1.2
4,645,924	-		PFLU_RS20610	0.30	-0.2
4,645,924	-		PFLU_RS20610	0.30	-0.5
4,646,000	+		PFLU_RS20610	0.38	-1.1