Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS05025 and PFLU_RS05030 are separated by 55 nucleotides PFLU_RS05030 and PFLU_RS05035 are separated by 38 nucleotides PFLU_RS05035 and PFLU_RS05040 are separated by 34 nucleotides
PFLU_RS05025: PFLU_RS05025 - DUF1120 domain-containing protein, at 1,123,464 to 1,124,084
_RS05025
PFLU_RS05030: PFLU_RS05030 - DUF1120 domain-containing protein, at 1,124,140 to 1,124,760
_RS05030
PFLU_RS05035: PFLU_RS05035 - DUF1120 domain-containing protein, at 1,124,799 to 1,125,422
_RS05035
PFLU_RS05040: PFLU_RS05040 - DUF1120 domain-containing protein, at 1,125,457 to 1,126,083
_RS05040
Position (kb) 1124
1125
1126 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1124.105 kb on - strand at 1124.147 kb on + strand at 1124.148 kb on - strand at 1124.148 kb on - strand at 1124.148 kb on - strand at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.222 kb on + strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.223 kb on - strand, within PFLU_RS05030 at 1124.316 kb on + strand, within PFLU_RS05030 at 1124.316 kb on + strand, within PFLU_RS05030 at 1124.316 kb on + strand, within PFLU_RS05030 at 1124.316 kb on + strand, within PFLU_RS05030 at 1124.316 kb on + strand, within PFLU_RS05030 at 1124.316 kb on + strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.317 kb on - strand, within PFLU_RS05030 at 1124.406 kb on - strand, within PFLU_RS05030 at 1124.406 kb on - strand, within PFLU_RS05030 at 1124.418 kb on - strand, within PFLU_RS05030 at 1124.456 kb on + strand, within PFLU_RS05030 at 1124.456 kb on + strand, within PFLU_RS05030 at 1124.456 kb on + strand, within PFLU_RS05030 at 1124.456 kb on + strand, within PFLU_RS05030 at 1124.456 kb on + strand, within PFLU_RS05030 at 1124.456 kb on + strand, within PFLU_RS05030 at 1124.456 kb on + strand, within PFLU_RS05030 at 1124.457 kb on - strand, within PFLU_RS05030 at 1124.457 kb on - strand, within PFLU_RS05030 at 1124.457 kb on - strand, within PFLU_RS05030 at 1124.457 kb on - strand, within PFLU_RS05030 at 1124.457 kb on - strand, within PFLU_RS05030 at 1124.457 kb on - strand, within PFLU_RS05030 at 1124.457 kb on - strand, within PFLU_RS05030 at 1124.462 kb on + strand, within PFLU_RS05030 at 1124.462 kb on + strand, within PFLU_RS05030 at 1124.462 kb on + strand, within PFLU_RS05030 at 1124.462 kb on + strand, within PFLU_RS05030 at 1124.462 kb on + strand, within PFLU_RS05030 at 1124.463 kb on - strand, within PFLU_RS05030 at 1124.463 kb on - strand, within PFLU_RS05030 at 1124.463 kb on - strand, within PFLU_RS05030 at 1124.463 kb on - strand, within PFLU_RS05030 at 1124.463 kb on - strand, within PFLU_RS05030 at 1124.463 kb on - strand, within PFLU_RS05030 at 1124.496 kb on + strand, within PFLU_RS05030 at 1124.564 kb on + strand, within PFLU_RS05030 at 1124.564 kb on + strand, within PFLU_RS05030 at 1124.565 kb on - strand, within PFLU_RS05030 at 1124.565 kb on - strand, within PFLU_RS05030 at 1124.565 kb on - strand, within PFLU_RS05030 at 1124.750 kb on - strand at 1124.801 kb on - strand at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.980 kb on + strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1124.981 kb on - strand, within PFLU_RS05035 at 1125.015 kb on - strand, within PFLU_RS05035 at 1125.056 kb on + strand, within PFLU_RS05035 at 1125.056 kb on + strand, within PFLU_RS05035 at 1125.057 kb on - strand, within PFLU_RS05035 at 1125.057 kb on - strand, within PFLU_RS05035 at 1125.104 kb on + strand, within PFLU_RS05035 at 1125.105 kb on - strand, within PFLU_RS05035 at 1125.321 kb on - strand, within PFLU_RS05035 at 1125.400 kb on - strand at 1125.410 kb on + strand at 1125.410 kb on + strand at 1125.411 kb on - strand at 1125.411 kb on - strand at 1125.411 kb on - strand at 1125.411 kb on - strand at 1125.411 kb on - strand at 1125.422 kb on + strand at 1125.423 kb on - strand at 1125.465 kb on - strand at 1125.465 kb on - strand at 1125.465 kb on - strand at 1125.537 kb on + strand, within PFLU_RS05040 at 1125.669 kb on + strand, within PFLU_RS05040 at 1125.740 kb on + strand, within PFLU_RS05040 at 1125.740 kb on + strand, within PFLU_RS05040 at 1125.741 kb on - strand, within PFLU_RS05040 at 1125.759 kb on + strand, within PFLU_RS05040 at 1125.760 kb on - strand, within PFLU_RS05040 at 1126.026 kb on + strand at 1126.048 kb on + strand at 1126.063 kb on + strand at 1126.063 kb on + strand at 1126.063 kb on + strand at 1126.063 kb on + strand at 1126.064 kb on - strand at 1126.064 kb on - strand at 1126.064 kb on - strand at 1126.064 kb on - strand at 1126.064 kb on - strand at 1126.064 kb on - strand at 1126.244 kb on + strand at 1126.244 kb on + strand at 1126.244 kb on + strand at 1126.244 kb on + strand at 1126.244 kb on + strand at 1126.244 kb on + strand at 1126.244 kb on + strand at 1126.244 kb on + strand at 1126.245 kb on - strand at 1126.245 kb on - strand at 1126.245 kb on - strand at 1126.245 kb on - strand at 1126.245 kb on - strand at 1126.253 kb on + strand at 1126.253 kb on + strand at 1126.253 kb on + strand at 1126.253 kb on + strand at 1126.253 kb on + strand at 1126.254 kb on - strand at 1126.254 kb on - strand at 1126.254 kb on - strand at 1126.254 kb on - strand at 1126.254 kb on - strand at 1126.296 kb on + strand at 1126.296 kb on + strand at 1126.296 kb on + strand at 1126.296 kb on + strand at 1126.296 kb on + strand at 1126.296 kb on + strand at 1126.296 kb on + strand at 1126.296 kb on + strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.297 kb on - strand at 1126.300 kb on + strand at 1126.300 kb on + strand at 1126.301 kb on - strand at 1126.301 kb on - strand at 1126.301 kb on - strand at 1126.307 kb on - strand at 1126.317 kb on + strand at 1126.318 kb on - strand at 1126.362 kb on + strand at 1126.362 kb on + strand at 1126.363 kb on - strand at 1126.370 kb on + strand at 1126.370 kb on + strand at 1126.371 kb on - strand at 1126.371 kb on - strand at 1126.374 kb on + strand at 1126.374 kb on + strand at 1126.374 kb on + strand at 1126.374 kb on + strand at 1126.374 kb on + strand at 1126.374 kb on + strand at 1126.375 kb on - strand at 1126.375 kb on - strand at 1126.375 kb on - strand at 1126.375 kb on - strand at 1126.375 kb on - strand at 1126.375 kb on - strand at 1126.375 kb on - strand at 1126.378 kb on + strand at 1126.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 1,124,105 - +0.8 1,124,147 + -1.8 1,124,148 - +0.3 1,124,148 - -0.9 1,124,148 - +0.1 1,124,222 + PFLU_RS05030 0.13 -0.5 1,124,222 + PFLU_RS05030 0.13 +0.9 1,124,222 + PFLU_RS05030 0.13 -0.5 1,124,222 + PFLU_RS05030 0.13 +1.4 1,124,222 + PFLU_RS05030 0.13 -1.0 1,124,222 + PFLU_RS05030 0.13 +0.7 1,124,222 + PFLU_RS05030 0.13 -1.0 1,124,222 + PFLU_RS05030 0.13 +0.4 1,124,222 + PFLU_RS05030 0.13 +1.1 1,124,222 + PFLU_RS05030 0.13 -0.2 1,124,222 + PFLU_RS05030 0.13 +0.3 1,124,222 + PFLU_RS05030 0.13 -1.5 1,124,222 + PFLU_RS05030 0.13 -0.1 1,124,222 + PFLU_RS05030 0.13 +0.3 1,124,222 + PFLU_RS05030 0.13 +0.5 1,124,222 + PFLU_RS05030 0.13 -2.1 1,124,222 + PFLU_RS05030 0.13 -1.0 1,124,222 + PFLU_RS05030 0.13 -0.1 1,124,222 + PFLU_RS05030 0.13 +1.1 1,124,222 + PFLU_RS05030 0.13 -1.4 1,124,222 + PFLU_RS05030 0.13 +1.5 1,124,222 + PFLU_RS05030 0.13 -2.4 1,124,222 + PFLU_RS05030 0.13 -1.5 1,124,222 + PFLU_RS05030 0.13 -1.6 1,124,222 + PFLU_RS05030 0.13 +1.3 1,124,222 + PFLU_RS05030 0.13 -1.2 1,124,223 - PFLU_RS05030 0.13 +1.1 1,124,223 - PFLU_RS05030 0.13 +1.6 1,124,223 - PFLU_RS05030 0.13 -0.4 1,124,223 - PFLU_RS05030 0.13 -1.7 1,124,223 - PFLU_RS05030 0.13 -1.7 1,124,223 - PFLU_RS05030 0.13 +0.0 1,124,223 - PFLU_RS05030 0.13 +2.8 1,124,223 - PFLU_RS05030 0.13 -1.4 1,124,223 - PFLU_RS05030 0.13 -3.5 1,124,223 - PFLU_RS05030 0.13 +0.9 1,124,223 - PFLU_RS05030 0.13 +0.0 1,124,223 - PFLU_RS05030 0.13 +0.2 1,124,223 - PFLU_RS05030 0.13 -1.1 1,124,223 - PFLU_RS05030 0.13 -1.1 1,124,223 - PFLU_RS05030 0.13 +1.6 1,124,223 - PFLU_RS05030 0.13 +0.3 1,124,223 - PFLU_RS05030 0.13 -0.6 1,124,223 - PFLU_RS05030 0.13 -2.3 1,124,223 - PFLU_RS05030 0.13 -0.6 1,124,223 - PFLU_RS05030 0.13 -2.3 1,124,223 - PFLU_RS05030 0.13 +0.6 1,124,223 - PFLU_RS05030 0.13 +0.1 1,124,316 + PFLU_RS05030 0.28 +0.8 1,124,316 + PFLU_RS05030 0.28 -0.7 1,124,316 + PFLU_RS05030 0.28 -1.3 1,124,316 + PFLU_RS05030 0.28 -1.4 1,124,316 + PFLU_RS05030 0.28 -0.8 1,124,316 + PFLU_RS05030 0.28 -0.3 1,124,317 - PFLU_RS05030 0.29 +1.7 1,124,317 - PFLU_RS05030 0.29 +2.0 1,124,317 - PFLU_RS05030 0.29 +0.7 1,124,317 - PFLU_RS05030 0.29 -0.7 1,124,317 - PFLU_RS05030 0.29 +0.3 1,124,317 - PFLU_RS05030 0.29 +1.1 1,124,317 - PFLU_RS05030 0.29 +0.2 1,124,317 - PFLU_RS05030 0.29 +1.4 1,124,317 - PFLU_RS05030 0.29 -1.5 1,124,317 - PFLU_RS05030 0.29 +0.8 1,124,406 - PFLU_RS05030 0.43 -0.6 1,124,406 - PFLU_RS05030 0.43 +1.8 1,124,418 - PFLU_RS05030 0.45 -0.1 1,124,456 + PFLU_RS05030 0.51 -3.3 1,124,456 + PFLU_RS05030 0.51 +0.1 1,124,456 + PFLU_RS05030 0.51 +2.8 1,124,456 + PFLU_RS05030 0.51 +0.0 1,124,456 + PFLU_RS05030 0.51 +0.5 1,124,456 + PFLU_RS05030 0.51 -2.3 1,124,456 + PFLU_RS05030 0.51 +0.5 1,124,457 - PFLU_RS05030 0.51 +0.2 1,124,457 - PFLU_RS05030 0.51 +0.6 1,124,457 - PFLU_RS05030 0.51 +0.1 1,124,457 - PFLU_RS05030 0.51 -0.2 1,124,457 - PFLU_RS05030 0.51 +0.7 1,124,457 - PFLU_RS05030 0.51 -1.4 1,124,457 - PFLU_RS05030 0.51 +1.2 1,124,462 + PFLU_RS05030 0.52 -1.8 1,124,462 + PFLU_RS05030 0.52 +0.8 1,124,462 + PFLU_RS05030 0.52 -2.4 1,124,462 + PFLU_RS05030 0.52 -0.1 1,124,462 + PFLU_RS05030 0.52 -0.0 1,124,463 - PFLU_RS05030 0.52 +0.5 1,124,463 - PFLU_RS05030 0.52 +0.7 1,124,463 - PFLU_RS05030 0.52 +2.2 1,124,463 - PFLU_RS05030 0.52 +1.8 1,124,463 - PFLU_RS05030 0.52 -3.3 1,124,463 - PFLU_RS05030 0.52 -0.7 1,124,496 + PFLU_RS05030 0.57 -0.8 1,124,564 + PFLU_RS05030 0.68 +0.1 1,124,564 + PFLU_RS05030 0.68 +0.2 1,124,565 - PFLU_RS05030 0.68 -2.8 1,124,565 - PFLU_RS05030 0.68 -0.3 1,124,565 - PFLU_RS05030 0.68 -3.3 1,124,750 - -0.7 1,124,801 - -0.1 1,124,980 + PFLU_RS05035 0.29 +0.1 1,124,980 + PFLU_RS05035 0.29 -0.1 1,124,980 + PFLU_RS05035 0.29 -2.5 1,124,980 + PFLU_RS05035 0.29 +0.4 1,124,980 + PFLU_RS05035 0.29 +0.8 1,124,980 + PFLU_RS05035 0.29 +0.4 1,124,980 + PFLU_RS05035 0.29 +1.1 1,124,980 + PFLU_RS05035 0.29 -1.6 1,124,980 + PFLU_RS05035 0.29 -1.1 1,124,980 + PFLU_RS05035 0.29 -2.8 1,124,980 + PFLU_RS05035 0.29 -1.1 1,124,981 - PFLU_RS05035 0.29 -1.1 1,124,981 - PFLU_RS05035 0.29 -1.4 1,124,981 - PFLU_RS05035 0.29 +0.5 1,124,981 - PFLU_RS05035 0.29 -2.7 1,124,981 - PFLU_RS05035 0.29 -0.8 1,124,981 - PFLU_RS05035 0.29 -2.9 1,124,981 - PFLU_RS05035 0.29 -1.6 1,124,981 - PFLU_RS05035 0.29 -0.9 1,124,981 - PFLU_RS05035 0.29 -1.6 1,125,015 - PFLU_RS05035 0.35 -2.8 1,125,056 + PFLU_RS05035 0.41 -0.2 1,125,056 + PFLU_RS05035 0.41 -3.0 1,125,057 - PFLU_RS05035 0.41 +0.3 1,125,057 - PFLU_RS05035 0.41 +1.0 1,125,104 + PFLU_RS05035 0.49 -0.1 1,125,105 - PFLU_RS05035 0.49 +1.8 1,125,321 - PFLU_RS05035 0.84 +0.9 1,125,400 - +2.5 1,125,410 + -3.1 1,125,410 + -1.8 1,125,411 - +0.8 1,125,411 - -1.3 1,125,411 - +1.6 1,125,411 - -3.0 1,125,411 - +1.3 1,125,422 + +1.1 1,125,423 - +1.2 1,125,465 - -0.2 1,125,465 - -0.3 1,125,465 - -2.5 1,125,537 + PFLU_RS05040 0.13 +0.3 1,125,669 + PFLU_RS05040 0.34 -0.4 1,125,740 + PFLU_RS05040 0.45 +1.2 1,125,740 + PFLU_RS05040 0.45 +0.7 1,125,741 - PFLU_RS05040 0.45 -0.6 1,125,759 + PFLU_RS05040 0.48 -0.0 1,125,760 - PFLU_RS05040 0.48 -0.7 1,126,026 + -2.3 1,126,048 + +0.0 1,126,063 + -3.0 1,126,063 + -2.0 1,126,063 + -1.0 1,126,063 + -3.2 1,126,064 - +2.3 1,126,064 - -2.0 1,126,064 - +2.5 1,126,064 - -2.4 1,126,064 - -1.4 1,126,064 - +1.3 1,126,244 + +0.5 1,126,244 + +0.7 1,126,244 + -1.0 1,126,244 + +0.5 1,126,244 + -1.7 1,126,244 + -1.5 1,126,244 + +0.4 1,126,244 + -0.1 1,126,245 - -1.3 1,126,245 - -2.0 1,126,245 - -0.6 1,126,245 - -0.4 1,126,245 - +0.8 1,126,253 + -1.2 1,126,253 + -3.0 1,126,253 + +1.1 1,126,253 + +1.8 1,126,253 + +1.9 1,126,254 - +1.6 1,126,254 - -1.1 1,126,254 - +1.0 1,126,254 - +0.8 1,126,254 - -1.0 1,126,296 + +1.7 1,126,296 + +0.3 1,126,296 + +0.2 1,126,296 + +1.2 1,126,296 + -0.6 1,126,296 + +2.4 1,126,296 + -0.9 1,126,296 + -1.6 1,126,297 - -3.4 1,126,297 - +1.1 1,126,297 - -1.7 1,126,297 - -0.5 1,126,297 - -0.4 1,126,297 - -1.8 1,126,297 - -0.2 1,126,297 - +2.4 1,126,297 - +0.9 1,126,297 - +0.2 1,126,297 - -3.2 1,126,300 + -0.3 1,126,300 + +0.9 1,126,301 - -0.1 1,126,301 - -1.3 1,126,301 - +1.3 1,126,307 - -0.6 1,126,317 + -2.6 1,126,318 - +0.3 1,126,362 + -1.2 1,126,362 + -0.7 1,126,363 - -0.3 1,126,370 + -1.5 1,126,370 + +0.4 1,126,371 - +0.8 1,126,371 - -1.5 1,126,374 + +0.9 1,126,374 + +1.3 1,126,374 + +0.6 1,126,374 + +0.3 1,126,374 + -0.5 1,126,374 + +1.1 1,126,375 - +0.9 1,126,375 - +1.2 1,126,375 - +0.5 1,126,375 - -0.8 1,126,375 - +2.1 1,126,375 - -2.3 1,126,375 - -0.4 1,126,378 + -0.0 1,126,379 - +0.6
Or see this region's nucleotide sequence