Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01720 and PFLU_RS01725 are separated by 226 nucleotides PFLU_RS01725 and PFLU_RS01730 are separated by 239 nucleotides PFLU_RS01730 and PFLU_RS01735 are separated by 159 nucleotides
PFLU_RS01720: PFLU_RS01720 - translational GTPase TypA, at 382,159 to 383,979
_RS01720
PFLU_RS01725: PFLU_RS01725 - YkgJ family cysteine cluster protein, at 384,206 to 384,640
_RS01725
PFLU_RS01730: PFLU_RS01730 - glycogen/starch/alpha-glucan phosphorylase, at 384,880 to 387,330
_RS01730
PFLU_RS01735: PFLU_RS01735 - DUF2339 domain-containing protein, at 387,490 to 391,014
_RS01735
Position (kb) 384
385
386
387
388 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 383.982 kb on + strand at 383.982 kb on + strand at 383.983 kb on - strand at 383.983 kb on - strand at 384.120 kb on + strand at 384.120 kb on + strand at 384.120 kb on + strand at 384.120 kb on + strand at 384.120 kb on + strand at 384.130 kb on + strand at 384.130 kb on + strand at 384.130 kb on + strand at 384.131 kb on - strand at 384.197 kb on + strand at 384.197 kb on + strand at 384.215 kb on - strand at 384.215 kb on - strand at 384.245 kb on + strand at 384.245 kb on + strand at 384.246 kb on - strand at 384.246 kb on - strand at 384.246 kb on - strand at 384.246 kb on - strand at 384.246 kb on - strand at 384.260 kb on - strand, within PFLU_RS01725 at 384.261 kb on + strand, within PFLU_RS01725 at 384.261 kb on + strand, within PFLU_RS01725 at 384.261 kb on + strand, within PFLU_RS01725 at 384.261 kb on + strand, within PFLU_RS01725 at 384.261 kb on + strand, within PFLU_RS01725 at 384.262 kb on - strand, within PFLU_RS01725 at 384.262 kb on - strand, within PFLU_RS01725 at 384.262 kb on - strand, within PFLU_RS01725 at 384.262 kb on - strand, within PFLU_RS01725 at 384.262 kb on - strand, within PFLU_RS01725 at 384.262 kb on - strand, within PFLU_RS01725 at 384.327 kb on + strand, within PFLU_RS01725 at 384.327 kb on + strand, within PFLU_RS01725 at 384.327 kb on + strand, within PFLU_RS01725 at 384.328 kb on - strand, within PFLU_RS01725 at 384.328 kb on - strand, within PFLU_RS01725 at 384.328 kb on - strand, within PFLU_RS01725 at 384.331 kb on + strand, within PFLU_RS01725 at 384.332 kb on - strand, within PFLU_RS01725 at 384.332 kb on - strand, within PFLU_RS01725 at 384.332 kb on - strand, within PFLU_RS01725 at 384.332 kb on - strand, within PFLU_RS01725 at 384.332 kb on - strand, within PFLU_RS01725 at 384.349 kb on + strand, within PFLU_RS01725 at 384.349 kb on + strand, within PFLU_RS01725 at 384.349 kb on + strand, within PFLU_RS01725 at 384.349 kb on + strand, within PFLU_RS01725 at 384.350 kb on - strand, within PFLU_RS01725 at 384.350 kb on - strand, within PFLU_RS01725 at 384.350 kb on - strand, within PFLU_RS01725 at 384.350 kb on - strand, within PFLU_RS01725 at 384.360 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.571 kb on + strand, within PFLU_RS01725 at 384.572 kb on - strand, within PFLU_RS01725 at 384.572 kb on - strand, within PFLU_RS01725 at 384.572 kb on - strand, within PFLU_RS01725 at 384.572 kb on - strand, within PFLU_RS01725 at 384.572 kb on - strand, within PFLU_RS01725 at 384.572 kb on - strand, within PFLU_RS01725 at 384.572 kb on - strand, within PFLU_RS01725 at 384.583 kb on - strand, within PFLU_RS01725 at 384.661 kb on + strand at 384.661 kb on + strand at 384.661 kb on + strand at 384.661 kb on + strand at 384.661 kb on + strand at 384.662 kb on - strand at 384.662 kb on - strand at 384.662 kb on - strand at 384.709 kb on - strand at 384.769 kb on + strand at 384.769 kb on + strand at 384.769 kb on + strand at 384.769 kb on + strand at 384.769 kb on + strand at 384.770 kb on - strand at 384.778 kb on + strand at 384.838 kb on - strand at 384.845 kb on - strand at 384.845 kb on - strand at 384.857 kb on + strand at 384.857 kb on + strand at 384.857 kb on + strand at 384.857 kb on + strand at 384.857 kb on + strand at 384.858 kb on - strand at 384.858 kb on - strand at 384.858 kb on - strand at 384.858 kb on - strand at 384.914 kb on + strand at 384.952 kb on + strand at 384.952 kb on + strand at 384.952 kb on + strand at 384.952 kb on + strand at 384.953 kb on - strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.090 kb on + strand at 385.091 kb on - strand at 385.091 kb on - strand at 385.091 kb on - strand at 385.091 kb on - strand at 385.091 kb on - strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.093 kb on + strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.094 kb on - strand at 385.129 kb on + strand, within PFLU_RS01730 at 385.130 kb on - strand, within PFLU_RS01730 at 385.272 kb on + strand, within PFLU_RS01730 at 385.313 kb on - strand, within PFLU_RS01730 at 385.520 kb on + strand, within PFLU_RS01730 at 385.535 kb on - strand, within PFLU_RS01730 at 385.747 kb on + strand, within PFLU_RS01730 at 385.747 kb on + strand, within PFLU_RS01730 at 385.954 kb on + strand, within PFLU_RS01730 at 385.955 kb on - strand, within PFLU_RS01730 at 385.955 kb on - strand, within PFLU_RS01730 at 386.044 kb on + strand, within PFLU_RS01730 at 386.044 kb on + strand, within PFLU_RS01730 at 386.044 kb on + strand, within PFLU_RS01730 at 386.044 kb on + strand, within PFLU_RS01730 at 386.044 kb on + strand, within PFLU_RS01730 at 386.044 kb on + strand, within PFLU_RS01730 at 386.044 kb on + strand, within PFLU_RS01730 at 386.045 kb on - strand, within PFLU_RS01730 at 386.045 kb on - strand, within PFLU_RS01730 at 386.064 kb on + strand, within PFLU_RS01730 at 386.268 kb on + strand, within PFLU_RS01730 at 386.269 kb on - strand, within PFLU_RS01730 at 386.544 kb on + strand, within PFLU_RS01730 at 386.554 kb on + strand, within PFLU_RS01730 at 386.554 kb on + strand, within PFLU_RS01730 at 386.554 kb on + strand, within PFLU_RS01730 at 386.555 kb on - strand, within PFLU_RS01730 at 386.555 kb on - strand, within PFLU_RS01730 at 386.555 kb on - strand, within PFLU_RS01730 at 386.555 kb on - strand, within PFLU_RS01730 at 386.597 kb on - strand, within PFLU_RS01730 at 386.674 kb on + strand, within PFLU_RS01730 at 386.675 kb on - strand, within PFLU_RS01730 at 386.775 kb on + strand, within PFLU_RS01730 at 386.775 kb on + strand, within PFLU_RS01730 at 386.776 kb on - strand, within PFLU_RS01730 at 386.776 kb on - strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.779 kb on + strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.780 kb on - strand, within PFLU_RS01730 at 386.868 kb on + strand, within PFLU_RS01730 at 386.869 kb on - strand, within PFLU_RS01730 at 386.965 kb on - strand, within PFLU_RS01730 at 386.965 kb on - strand, within PFLU_RS01730 at 386.965 kb on - strand, within PFLU_RS01730 at 386.965 kb on - strand, within PFLU_RS01730 at 386.965 kb on - strand, within PFLU_RS01730 at 387.112 kb on + strand at 387.112 kb on + strand at 387.112 kb on + strand at 387.113 kb on - strand at 387.113 kb on - strand at 387.142 kb on + strand at 387.298 kb on + strand at 387.299 kb on - strand at 387.328 kb on + strand at 387.394 kb on + strand at 387.394 kb on + strand at 387.395 kb on - strand at 387.395 kb on - strand at 387.395 kb on - strand at 387.395 kb on - strand at 387.395 kb on - strand at 387.395 kb on - strand at 387.455 kb on - strand at 387.456 kb on + strand at 387.456 kb on + strand at 387.456 kb on + strand at 387.456 kb on + strand at 387.456 kb on + strand at 387.456 kb on + strand at 387.457 kb on - strand at 387.457 kb on - strand at 387.457 kb on - strand at 387.457 kb on - strand at 387.457 kb on - strand at 387.457 kb on - strand at 387.671 kb on + strand at 387.672 kb on - strand at 387.748 kb on - strand at 387.748 kb on - strand at 387.771 kb on + strand at 387.771 kb on + strand at 387.939 kb on + strand, within PFLU_RS01735 at 387.970 kb on - strand, within PFLU_RS01735 at 388.028 kb on - strand, within PFLU_RS01735 at 388.046 kb on + strand, within PFLU_RS01735 at 388.047 kb on - strand, within PFLU_RS01735 at 388.128 kb on + strand, within PFLU_RS01735 at 388.138 kb on + strand, within PFLU_RS01735 at 388.138 kb on + strand, within PFLU_RS01735 at 388.178 kb on - strand, within PFLU_RS01735 at 388.178 kb on - strand, within PFLU_RS01735
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 383,982 + -1.7 383,982 + -0.4 383,983 - -0.0 383,983 - -0.9 384,120 + +1.1 384,120 + +1.9 384,120 + +1.0 384,120 + -0.4 384,120 + +0.9 384,130 + +1.5 384,130 + +0.9 384,130 + +1.0 384,131 - -3.0 384,197 + +0.6 384,197 + -0.3 384,215 - -0.7 384,215 - +0.9 384,245 + -0.8 384,245 + +0.7 384,246 - -1.5 384,246 - -2.5 384,246 - +0.6 384,246 - -0.3 384,246 - -3.3 384,260 - PFLU_RS01725 0.12 -2.3 384,261 + PFLU_RS01725 0.13 +0.9 384,261 + PFLU_RS01725 0.13 -1.6 384,261 + PFLU_RS01725 0.13 -2.0 384,261 + PFLU_RS01725 0.13 -1.1 384,261 + PFLU_RS01725 0.13 +2.7 384,262 - PFLU_RS01725 0.13 +1.1 384,262 - PFLU_RS01725 0.13 -3.0 384,262 - PFLU_RS01725 0.13 +0.6 384,262 - PFLU_RS01725 0.13 +0.6 384,262 - PFLU_RS01725 0.13 -0.8 384,262 - PFLU_RS01725 0.13 -0.6 384,327 + PFLU_RS01725 0.28 -1.5 384,327 + PFLU_RS01725 0.28 +1.6 384,327 + PFLU_RS01725 0.28 +1.2 384,328 - PFLU_RS01725 0.28 -0.0 384,328 - PFLU_RS01725 0.28 +0.4 384,328 - PFLU_RS01725 0.28 +0.0 384,331 + PFLU_RS01725 0.29 -2.0 384,332 - PFLU_RS01725 0.29 +1.7 384,332 - PFLU_RS01725 0.29 -2.0 384,332 - PFLU_RS01725 0.29 -1.9 384,332 - PFLU_RS01725 0.29 -1.6 384,332 - PFLU_RS01725 0.29 +1.2 384,349 + PFLU_RS01725 0.33 +1.8 384,349 + PFLU_RS01725 0.33 -1.3 384,349 + PFLU_RS01725 0.33 -0.3 384,349 + PFLU_RS01725 0.33 -1.8 384,350 - PFLU_RS01725 0.33 +1.0 384,350 - PFLU_RS01725 0.33 -0.1 384,350 - PFLU_RS01725 0.33 -1.4 384,350 - PFLU_RS01725 0.33 +0.6 384,360 + PFLU_RS01725 0.35 +0.5 384,571 + PFLU_RS01725 0.84 -1.3 384,571 + PFLU_RS01725 0.84 -1.9 384,571 + PFLU_RS01725 0.84 +1.2 384,571 + PFLU_RS01725 0.84 -0.3 384,571 + PFLU_RS01725 0.84 -0.4 384,571 + PFLU_RS01725 0.84 -0.8 384,571 + PFLU_RS01725 0.84 -0.4 384,571 + PFLU_RS01725 0.84 -2.3 384,572 - PFLU_RS01725 0.84 +1.6 384,572 - PFLU_RS01725 0.84 -2.5 384,572 - PFLU_RS01725 0.84 -2.9 384,572 - PFLU_RS01725 0.84 -1.4 384,572 - PFLU_RS01725 0.84 -0.4 384,572 - PFLU_RS01725 0.84 +0.7 384,572 - PFLU_RS01725 0.84 -2.9 384,583 - PFLU_RS01725 0.87 +1.8 384,661 + +1.6 384,661 + -1.5 384,661 + -1.1 384,661 + +1.4 384,661 + -0.2 384,662 - -1.5 384,662 - -1.4 384,662 - -0.4 384,709 - +0.6 384,769 + -1.3 384,769 + +1.1 384,769 + -0.0 384,769 + +0.8 384,769 + +0.5 384,770 - +1.1 384,778 + +1.9 384,838 - +1.2 384,845 - -0.3 384,845 - -1.1 384,857 + +2.7 384,857 + +0.3 384,857 + +1.8 384,857 + -1.9 384,857 + -1.0 384,858 - +0.3 384,858 - +0.1 384,858 - -0.6 384,858 - -1.1 384,914 + +0.7 384,952 + -1.7 384,952 + -0.4 384,952 + +1.1 384,952 + +2.6 384,953 - -2.4 385,090 + +1.6 385,090 + +3.1 385,090 + +0.8 385,090 + +1.0 385,090 + -3.1 385,090 + +0.2 385,090 + -2.8 385,090 + -0.6 385,090 + +2.0 385,090 + -0.0 385,090 + +0.8 385,090 + +1.0 385,090 + -0.1 385,090 + +1.7 385,090 + -2.7 385,090 + +1.2 385,090 + +0.6 385,091 - +0.9 385,091 - -0.4 385,091 - +0.8 385,091 - -0.3 385,091 - +0.7 385,093 + -1.1 385,093 + +2.0 385,093 + +0.4 385,093 + +0.2 385,093 + -0.6 385,093 + -0.9 385,093 + -0.3 385,093 + -0.4 385,093 + +1.4 385,093 + +1.3 385,093 + +0.6 385,094 - -1.8 385,094 - +0.1 385,094 - +2.6 385,094 - -0.2 385,094 - -0.8 385,094 - +0.7 385,094 - -1.0 385,094 - +1.3 385,094 - +0.5 385,094 - -1.3 385,094 - +0.5 385,094 - +0.7 385,094 - -0.9 385,094 - -3.2 385,129 + PFLU_RS01730 0.10 -0.4 385,130 - PFLU_RS01730 0.10 -0.7 385,272 + PFLU_RS01730 0.16 -1.3 385,313 - PFLU_RS01730 0.18 +0.7 385,520 + PFLU_RS01730 0.26 +0.4 385,535 - PFLU_RS01730 0.27 -0.3 385,747 + PFLU_RS01730 0.35 +0.2 385,747 + PFLU_RS01730 0.35 +0.3 385,954 + PFLU_RS01730 0.44 -2.0 385,955 - PFLU_RS01730 0.44 +0.6 385,955 - PFLU_RS01730 0.44 -0.0 386,044 + PFLU_RS01730 0.47 -2.0 386,044 + PFLU_RS01730 0.47 +1.1 386,044 + PFLU_RS01730 0.47 -0.4 386,044 + PFLU_RS01730 0.47 -0.4 386,044 + PFLU_RS01730 0.47 -0.3 386,044 + PFLU_RS01730 0.47 -1.9 386,044 + PFLU_RS01730 0.47 +0.1 386,045 - PFLU_RS01730 0.48 +0.4 386,045 - PFLU_RS01730 0.48 -0.6 386,064 + PFLU_RS01730 0.48 -2.2 386,268 + PFLU_RS01730 0.57 -0.5 386,269 - PFLU_RS01730 0.57 +1.0 386,544 + PFLU_RS01730 0.68 -0.5 386,554 + PFLU_RS01730 0.68 +1.0 386,554 + PFLU_RS01730 0.68 -0.4 386,554 + PFLU_RS01730 0.68 +2.2 386,555 - PFLU_RS01730 0.68 +0.7 386,555 - PFLU_RS01730 0.68 -0.4 386,555 - PFLU_RS01730 0.68 -0.8 386,555 - PFLU_RS01730 0.68 -0.1 386,597 - PFLU_RS01730 0.70 -1.3 386,674 + PFLU_RS01730 0.73 -2.4 386,675 - PFLU_RS01730 0.73 -0.0 386,775 + PFLU_RS01730 0.77 +1.5 386,775 + PFLU_RS01730 0.77 +1.3 386,776 - PFLU_RS01730 0.77 +1.4 386,776 - PFLU_RS01730 0.77 -0.3 386,779 + PFLU_RS01730 0.77 +1.7 386,779 + PFLU_RS01730 0.77 -0.6 386,779 + PFLU_RS01730 0.77 -0.8 386,779 + PFLU_RS01730 0.77 +1.3 386,779 + PFLU_RS01730 0.77 +1.1 386,779 + PFLU_RS01730 0.77 -1.4 386,779 + PFLU_RS01730 0.77 +0.8 386,779 + PFLU_RS01730 0.77 +0.5 386,779 + PFLU_RS01730 0.77 +1.3 386,779 + PFLU_RS01730 0.77 +1.2 386,779 + PFLU_RS01730 0.77 +1.1 386,779 + PFLU_RS01730 0.77 -0.4 386,780 - PFLU_RS01730 0.78 -1.6 386,780 - PFLU_RS01730 0.78 +0.3 386,780 - PFLU_RS01730 0.78 +1.3 386,780 - PFLU_RS01730 0.78 +1.2 386,780 - PFLU_RS01730 0.78 +1.8 386,780 - PFLU_RS01730 0.78 +1.1 386,780 - PFLU_RS01730 0.78 -1.4 386,780 - PFLU_RS01730 0.78 -0.7 386,780 - PFLU_RS01730 0.78 +0.4 386,780 - PFLU_RS01730 0.78 +1.1 386,780 - PFLU_RS01730 0.78 +0.8 386,780 - PFLU_RS01730 0.78 +2.9 386,780 - PFLU_RS01730 0.78 -0.9 386,780 - PFLU_RS01730 0.78 -1.0 386,780 - PFLU_RS01730 0.78 +0.8 386,868 + PFLU_RS01730 0.81 +1.6 386,869 - PFLU_RS01730 0.81 -0.8 386,965 - PFLU_RS01730 0.85 +1.0 386,965 - PFLU_RS01730 0.85 +0.6 386,965 - PFLU_RS01730 0.85 +2.3 386,965 - PFLU_RS01730 0.85 +1.1 386,965 - PFLU_RS01730 0.85 +0.8 387,112 + -0.2 387,112 + +0.8 387,112 + -0.3 387,113 - +0.6 387,113 - -1.6 387,142 + -1.4 387,298 + +0.8 387,299 - -1.0 387,328 + -0.1 387,394 + +1.7 387,394 + -0.4 387,395 - +0.0 387,395 - -1.7 387,395 - -0.1 387,395 - -0.1 387,395 - +1.1 387,395 - -0.0 387,455 - +0.3 387,456 + +1.2 387,456 + +1.1 387,456 + +2.2 387,456 + +0.4 387,456 + -1.9 387,456 + +0.7 387,457 - -0.5 387,457 - +0.1 387,457 - -0.1 387,457 - +1.9 387,457 - -0.6 387,457 - -0.2 387,671 + +0.6 387,672 - +0.3 387,748 - +0.3 387,748 - +0.2 387,771 + +0.7 387,771 + +0.9 387,939 + PFLU_RS01735 0.13 -2.9 387,970 - PFLU_RS01735 0.14 -0.3 388,028 - PFLU_RS01735 0.15 -0.2 388,046 + PFLU_RS01735 0.16 +0.4 388,047 - PFLU_RS01735 0.16 +0.0 388,128 + PFLU_RS01735 0.18 -1.7 388,138 + PFLU_RS01735 0.18 +1.0 388,138 + PFLU_RS01735 0.18 -1.1 388,178 - PFLU_RS01735 0.20 -0.9 388,178 - PFLU_RS01735 0.20 -1.3
Or see this region's nucleotide sequence