Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_16405 and OH686_16410 are separated by 147 nucleotides OH686_16410 and OH686_16415 overlap by 17 nucleotides OH686_16415 and OH686_16420 are separated by 121 nucleotides
OH686_16405: OH686_16405 - Outer membrane beta-barrel assembly protein BamD, at 3,431,757 to 3,432,782
_16405
OH686_16410: OH686_16410 - LSU rRNA pseudouridine(1911/1915/1917) synthase , at 3,432,930 to 3,433,901
_16410
OH686_16415: OH686_16415 - Multicopper polyphenol oxidase, at 3,433,885 to 3,434,619
_16415
OH686_16420: OH686_16420 - ATP-dependent chaperone protein ClpB, at 3,434,741 to 3,437,305
_16420
Position (kb)
3432
3433
3434 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3432.061 kb on + strand, within OH686_16405 at 3432.061 kb on + strand, within OH686_16405 at 3432.061 kb on + strand, within OH686_16405 at 3432.062 kb on - strand, within OH686_16405 at 3432.062 kb on - strand, within OH686_16405 at 3432.062 kb on - strand, within OH686_16405 at 3432.062 kb on - strand, within OH686_16405 at 3432.815 kb on - strand at 3432.834 kb on - strand at 3432.834 kb on - strand at 3432.834 kb on - strand at 3432.834 kb on - strand at 3432.834 kb on - strand at 3432.834 kb on - strand at 3432.874 kb on - strand at 3432.874 kb on - strand at 3432.874 kb on - strand at 3432.874 kb on - strand at 3432.878 kb on - strand at 3432.878 kb on - strand at 3433.032 kb on + strand, within OH686_16410 at 3433.032 kb on + strand, within OH686_16410 at 3433.032 kb on + strand, within OH686_16410 at 3433.032 kb on + strand, within OH686_16410 at 3433.033 kb on - strand, within OH686_16410 at 3433.201 kb on - strand, within OH686_16410 at 3433.449 kb on + strand, within OH686_16410 at 3433.449 kb on + strand, within OH686_16410 at 3433.449 kb on + strand, within OH686_16410 at 3433.449 kb on + strand, within OH686_16410 at 3433.449 kb on + strand, within OH686_16410 at 3433.449 kb on + strand, within OH686_16410 at 3433.449 kb on + strand, within OH686_16410 at 3433.450 kb on - strand, within OH686_16410 at 3433.450 kb on - strand, within OH686_16410 at 3433.450 kb on - strand, within OH686_16410 at 3433.450 kb on - strand, within OH686_16410 at 3433.695 kb on + strand, within OH686_16410 at 3433.953 kb on + strand at 3433.953 kb on + strand at 3433.954 kb on - strand at 3433.954 kb on - strand at 3433.954 kb on - strand at 3433.954 kb on - strand at 3434.100 kb on + strand, within OH686_16415 at 3434.100 kb on + strand, within OH686_16415 at 3434.100 kb on + strand, within OH686_16415 at 3434.101 kb on - strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.455 kb on + strand, within OH686_16415 at 3434.456 kb on - strand, within OH686_16415 at 3434.456 kb on - strand, within OH686_16415 at 3434.456 kb on - strand, within OH686_16415 at 3434.456 kb on - strand, within OH686_16415 at 3434.456 kb on - strand, within OH686_16415 at 3434.456 kb on - strand, within OH686_16415 at 3434.456 kb on - strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.470 kb on + strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.471 kb on - strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.516 kb on + strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.517 kb on - strand, within OH686_16415 at 3434.518 kb on + strand, within OH686_16415 at 3434.519 kb on - strand, within OH686_16415 at 3434.519 kb on - strand, within OH686_16415 at 3434.519 kb on - strand, within OH686_16415 at 3434.519 kb on - strand, within OH686_16415 at 3434.519 kb on - strand, within OH686_16415 at 3434.519 kb on - strand, within OH686_16415 at 3434.535 kb on + strand, within OH686_16415 at 3434.535 kb on + strand, within OH686_16415 at 3434.535 kb on + strand, within OH686_16415 at 3434.535 kb on + strand, within OH686_16415 at 3434.535 kb on + strand, within OH686_16415 at 3434.536 kb on - strand, within OH686_16415 at 3434.536 kb on - strand, within OH686_16415 at 3434.663 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.667 kb on + strand at 3434.668 kb on - strand at 3434.668 kb on - strand at 3434.668 kb on - strand at 3434.668 kb on - strand at 3434.668 kb on - strand at 3434.668 kb on - strand at 3434.678 kb on - strand at 3434.758 kb on + strand at 3434.758 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 3,432,061 + OH686_16405 0.30 -3.1 3,432,061 + OH686_16405 0.30 +0.7 3,432,061 + OH686_16405 0.30 -4.1 3,432,062 - OH686_16405 0.30 +0.9 3,432,062 - OH686_16405 0.30 -0.5 3,432,062 - OH686_16405 0.30 +0.0 3,432,062 - OH686_16405 0.30 -2.2 3,432,815 - -1.1 3,432,834 - -1.7 3,432,834 - -1.8 3,432,834 - -1.8 3,432,834 - -1.0 3,432,834 - -1.9 3,432,834 - -0.5 3,432,874 - -1.3 3,432,874 - -2.0 3,432,874 - -2.7 3,432,874 - +0.6 3,432,878 - -0.3 3,432,878 - +0.2 3,433,032 + OH686_16410 0.10 -2.1 3,433,032 + OH686_16410 0.10 -2.1 3,433,032 + OH686_16410 0.10 -2.7 3,433,032 + OH686_16410 0.10 +0.1 3,433,033 - OH686_16410 0.11 -0.9 3,433,201 - OH686_16410 0.28 +0.9 3,433,449 + OH686_16410 0.53 -0.8 3,433,449 + OH686_16410 0.53 -1.9 3,433,449 + OH686_16410 0.53 -0.6 3,433,449 + OH686_16410 0.53 +0.1 3,433,449 + OH686_16410 0.53 -2.1 3,433,449 + OH686_16410 0.53 +0.0 3,433,449 + OH686_16410 0.53 -1.3 3,433,450 - OH686_16410 0.53 +1.3 3,433,450 - OH686_16410 0.53 -1.7 3,433,450 - OH686_16410 0.53 -2.1 3,433,450 - OH686_16410 0.53 +0.1 3,433,695 + OH686_16410 0.79 -1.4 3,433,953 + +0.5 3,433,953 + +1.2 3,433,954 - +0.1 3,433,954 - +0.2 3,433,954 - +0.0 3,433,954 - +1.7 3,434,100 + OH686_16415 0.29 -1.2 3,434,100 + OH686_16415 0.29 +1.1 3,434,100 + OH686_16415 0.29 -1.8 3,434,101 - OH686_16415 0.29 +3.3 3,434,455 + OH686_16415 0.78 +0.5 3,434,455 + OH686_16415 0.78 -0.6 3,434,455 + OH686_16415 0.78 +0.3 3,434,455 + OH686_16415 0.78 +0.1 3,434,455 + OH686_16415 0.78 -0.3 3,434,455 + OH686_16415 0.78 +1.0 3,434,455 + OH686_16415 0.78 -0.4 3,434,455 + OH686_16415 0.78 -0.7 3,434,455 + OH686_16415 0.78 -1.0 3,434,455 + OH686_16415 0.78 +1.4 3,434,455 + OH686_16415 0.78 -0.6 3,434,455 + OH686_16415 0.78 +0.6 3,434,455 + OH686_16415 0.78 +1.1 3,434,456 - OH686_16415 0.78 -2.1 3,434,456 - OH686_16415 0.78 -2.2 3,434,456 - OH686_16415 0.78 +0.5 3,434,456 - OH686_16415 0.78 +0.7 3,434,456 - OH686_16415 0.78 -1.3 3,434,456 - OH686_16415 0.78 -0.8 3,434,456 - OH686_16415 0.78 -0.4 3,434,470 + OH686_16415 0.80 -0.2 3,434,470 + OH686_16415 0.80 -0.6 3,434,470 + OH686_16415 0.80 +1.3 3,434,470 + OH686_16415 0.80 -1.7 3,434,470 + OH686_16415 0.80 +1.4 3,434,470 + OH686_16415 0.80 -1.6 3,434,470 + OH686_16415 0.80 +0.3 3,434,470 + OH686_16415 0.80 -0.6 3,434,470 + OH686_16415 0.80 -0.2 3,434,470 + OH686_16415 0.80 +0.4 3,434,470 + OH686_16415 0.80 -0.2 3,434,470 + OH686_16415 0.80 -1.5 3,434,470 + OH686_16415 0.80 +0.1 3,434,470 + OH686_16415 0.80 +0.4 3,434,470 + OH686_16415 0.80 +0.6 3,434,470 + OH686_16415 0.80 +0.1 3,434,470 + OH686_16415 0.80 +1.3 3,434,470 + OH686_16415 0.80 -0.4 3,434,470 + OH686_16415 0.80 -0.0 3,434,471 - OH686_16415 0.80 +1.2 3,434,471 - OH686_16415 0.80 -0.0 3,434,471 - OH686_16415 0.80 +0.3 3,434,471 - OH686_16415 0.80 -0.3 3,434,471 - OH686_16415 0.80 +1.1 3,434,471 - OH686_16415 0.80 -0.4 3,434,471 - OH686_16415 0.80 -0.1 3,434,471 - OH686_16415 0.80 -1.4 3,434,471 - OH686_16415 0.80 +1.2 3,434,471 - OH686_16415 0.80 +1.4 3,434,471 - OH686_16415 0.80 +0.4 3,434,471 - OH686_16415 0.80 -0.3 3,434,471 - OH686_16415 0.80 -0.1 3,434,471 - OH686_16415 0.80 -0.2 3,434,516 + OH686_16415 0.86 -1.3 3,434,516 + OH686_16415 0.86 -0.3 3,434,516 + OH686_16415 0.86 -0.3 3,434,516 + OH686_16415 0.86 +1.9 3,434,516 + OH686_16415 0.86 -1.8 3,434,516 + OH686_16415 0.86 +1.0 3,434,516 + OH686_16415 0.86 -1.1 3,434,516 + OH686_16415 0.86 +0.4 3,434,516 + OH686_16415 0.86 +0.7 3,434,516 + OH686_16415 0.86 -0.2 3,434,516 + OH686_16415 0.86 +0.3 3,434,516 + OH686_16415 0.86 -0.1 3,434,517 - OH686_16415 0.86 +1.6 3,434,517 - OH686_16415 0.86 +0.7 3,434,517 - OH686_16415 0.86 -0.6 3,434,517 - OH686_16415 0.86 -0.2 3,434,517 - OH686_16415 0.86 -0.1 3,434,517 - OH686_16415 0.86 -0.1 3,434,517 - OH686_16415 0.86 +1.2 3,434,517 - OH686_16415 0.86 +0.4 3,434,517 - OH686_16415 0.86 +0.2 3,434,517 - OH686_16415 0.86 -0.9 3,434,518 + OH686_16415 0.86 -0.3 3,434,519 - OH686_16415 0.86 -0.5 3,434,519 - OH686_16415 0.86 +1.1 3,434,519 - OH686_16415 0.86 +2.1 3,434,519 - OH686_16415 0.86 +1.2 3,434,519 - OH686_16415 0.86 +0.5 3,434,519 - OH686_16415 0.86 +1.5 3,434,535 + OH686_16415 0.88 +1.2 3,434,535 + OH686_16415 0.88 +2.6 3,434,535 + OH686_16415 0.88 +0.5 3,434,535 + OH686_16415 0.88 -1.9 3,434,535 + OH686_16415 0.88 +0.4 3,434,536 - OH686_16415 0.89 +1.8 3,434,536 - OH686_16415 0.89 -0.6 3,434,663 + -1.0 3,434,667 + +0.6 3,434,667 + -1.3 3,434,667 + -0.5 3,434,667 + +0.8 3,434,667 + +0.8 3,434,667 + -0.3 3,434,667 + -1.2 3,434,667 + +0.2 3,434,667 + +0.2 3,434,667 + -0.8 3,434,667 + +0.3 3,434,667 + -0.2 3,434,667 + -0.5 3,434,667 + -0.6 3,434,667 + -0.2 3,434,667 + -1.8 3,434,668 - -0.7 3,434,668 - +0.4 3,434,668 - -0.2 3,434,668 - +0.4 3,434,668 - +0.4 3,434,668 - +0.2 3,434,678 - +0.5 3,434,758 + +1.5 3,434,758 + +0.6
Or see this region's nucleotide sequence