Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_15760 and OH686_15765 are separated by 81 nucleotides OH686_15765 and OH686_15770 are separated by 9 nucleotides
OH686_15760: OH686_15760 - 1-deoxy-D-xylulose-5-phosphate synthase, at 3,284,453 to 3,286,348
_15760
OH686_15765: OH686_15765 - Epoxide hydrolase , at 3,286,430 to 3,287,380
_15765
OH686_15770: OH686_15770 - Probable pyruvate carboxylase, at 3,287,390 to 3,290,650
_15770
Position (kb)
3286
3287
3288 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3286.363 kb on + strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.364 kb on - strand at 3286.369 kb on + strand at 3286.369 kb on + strand at 3286.369 kb on + strand at 3286.369 kb on + strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.370 kb on - strand at 3286.388 kb on + strand at 3286.388 kb on + strand at 3286.389 kb on - strand at 3286.443 kb on + strand at 3286.443 kb on + strand at 3286.444 kb on - strand at 3286.737 kb on + strand, within OH686_15765 at 3286.737 kb on + strand, within OH686_15765 at 3286.738 kb on - strand, within OH686_15765 at 3286.920 kb on + strand, within OH686_15765 at 3286.920 kb on + strand, within OH686_15765 at 3286.921 kb on - strand, within OH686_15765 at 3286.921 kb on - strand, within OH686_15765 at 3286.921 kb on - strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.929 kb on + strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.930 kb on - strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.947 kb on + strand, within OH686_15765 at 3286.948 kb on - strand, within OH686_15765 at 3286.948 kb on - strand, within OH686_15765 at 3286.948 kb on - strand, within OH686_15765 at 3287.157 kb on + strand, within OH686_15765 at 3287.158 kb on - strand, within OH686_15765 at 3287.158 kb on - strand, within OH686_15765 at 3287.265 kb on + strand, within OH686_15765 at 3287.266 kb on - strand, within OH686_15765 at 3287.266 kb on - strand, within OH686_15765 at 3287.328 kb on + strand at 3287.328 kb on + strand at 3287.328 kb on + strand at 3287.328 kb on + strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.329 kb on - strand at 3287.375 kb on - strand at 3287.391 kb on + strand at 3287.392 kb on - strand at 3287.392 kb on - strand at 3287.392 kb on - strand at 3287.514 kb on + strand at 3287.514 kb on + strand at 3287.514 kb on + strand at 3287.514 kb on + strand at 3287.515 kb on - strand at 3287.515 kb on - strand at 3287.515 kb on - strand at 3287.515 kb on - strand at 3287.547 kb on + strand at 3287.548 kb on - strand at 3287.548 kb on - strand at 3287.739 kb on + strand, within OH686_15770 at 3287.851 kb on + strand, within OH686_15770 at 3287.851 kb on + strand, within OH686_15770 at 3287.852 kb on - strand, within OH686_15770 at 3287.852 kb on - strand, within OH686_15770 at 3287.852 kb on - strand, within OH686_15770 at 3287.852 kb on - strand, within OH686_15770 at 3287.852 kb on - strand, within OH686_15770 at 3287.911 kb on + strand, within OH686_15770 at 3287.911 kb on + strand, within OH686_15770 at 3287.911 kb on + strand, within OH686_15770 at 3287.911 kb on + strand, within OH686_15770 at 3287.912 kb on - strand, within OH686_15770 at 3287.912 kb on - strand, within OH686_15770 at 3287.926 kb on + strand, within OH686_15770 at 3287.926 kb on + strand, within OH686_15770 at 3287.926 kb on + strand, within OH686_15770 at 3287.927 kb on - strand, within OH686_15770 at 3287.927 kb on - strand, within OH686_15770 at 3287.927 kb on - strand, within OH686_15770 at 3287.927 kb on - strand, within OH686_15770 at 3288.053 kb on + strand, within OH686_15770 at 3288.054 kb on - strand, within OH686_15770 at 3288.054 kb on - strand, within OH686_15770 at 3288.054 kb on - strand, within OH686_15770 at 3288.054 kb on - strand, within OH686_15770 at 3288.054 kb on - strand, within OH686_15770 at 3288.102 kb on + strand, within OH686_15770 at 3288.103 kb on - strand, within OH686_15770 at 3288.103 kb on - strand, within OH686_15770 at 3288.103 kb on - strand, within OH686_15770 at 3288.186 kb on + strand, within OH686_15770 at 3288.187 kb on - strand, within OH686_15770 at 3288.187 kb on - strand, within OH686_15770 at 3288.195 kb on + strand, within OH686_15770 at 3288.195 kb on + strand, within OH686_15770 at 3288.195 kb on + strand, within OH686_15770 at 3288.195 kb on + strand, within OH686_15770 at 3288.195 kb on + strand, within OH686_15770 at 3288.196 kb on - strand, within OH686_15770 at 3288.196 kb on - strand, within OH686_15770 at 3288.196 kb on - strand, within OH686_15770 at 3288.196 kb on - strand, within OH686_15770 at 3288.196 kb on - strand, within OH686_15770 at 3288.196 kb on - strand, within OH686_15770 at 3288.196 kb on - strand, within OH686_15770
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 3,286,363 + -0.9 3,286,364 - -0.3 3,286,364 - +0.3 3,286,364 - -0.1 3,286,364 - +2.7 3,286,364 - +0.2 3,286,364 - -0.7 3,286,364 - +0.5 3,286,364 - -0.6 3,286,364 - -0.1 3,286,364 - +0.5 3,286,369 + -0.3 3,286,369 + -2.5 3,286,369 + -1.1 3,286,369 + -0.9 3,286,370 - +1.3 3,286,370 - +2.6 3,286,370 - +0.5 3,286,370 - -1.4 3,286,370 - +0.7 3,286,370 - -3.2 3,286,370 - -1.1 3,286,370 - +0.4 3,286,388 + -0.1 3,286,388 + +0.7 3,286,389 - -1.9 3,286,443 + +1.3 3,286,443 + +0.8 3,286,444 - +1.0 3,286,737 + OH686_15765 0.32 +0.7 3,286,737 + OH686_15765 0.32 +1.4 3,286,738 - OH686_15765 0.32 +0.3 3,286,920 + OH686_15765 0.52 -0.2 3,286,920 + OH686_15765 0.52 +0.6 3,286,921 - OH686_15765 0.52 +1.3 3,286,921 - OH686_15765 0.52 +0.7 3,286,921 - OH686_15765 0.52 +0.8 3,286,929 + OH686_15765 0.52 -0.9 3,286,929 + OH686_15765 0.52 +1.1 3,286,929 + OH686_15765 0.52 -1.8 3,286,929 + OH686_15765 0.52 -2.6 3,286,929 + OH686_15765 0.52 -2.1 3,286,930 - OH686_15765 0.53 +0.5 3,286,930 - OH686_15765 0.53 +0.4 3,286,930 - OH686_15765 0.53 +0.9 3,286,930 - OH686_15765 0.53 +1.8 3,286,930 - OH686_15765 0.53 +0.9 3,286,930 - OH686_15765 0.53 -0.2 3,286,930 - OH686_15765 0.53 -0.5 3,286,930 - OH686_15765 0.53 -0.7 3,286,930 - OH686_15765 0.53 +2.7 3,286,947 + OH686_15765 0.54 -1.0 3,286,947 + OH686_15765 0.54 +2.5 3,286,947 + OH686_15765 0.54 -1.0 3,286,947 + OH686_15765 0.54 -1.2 3,286,948 - OH686_15765 0.54 +0.6 3,286,948 - OH686_15765 0.54 -0.6 3,286,948 - OH686_15765 0.54 -2.4 3,287,157 + OH686_15765 0.76 -1.4 3,287,158 - OH686_15765 0.77 -0.9 3,287,158 - OH686_15765 0.77 +0.4 3,287,265 + OH686_15765 0.88 +0.1 3,287,266 - OH686_15765 0.88 +0.7 3,287,266 - OH686_15765 0.88 +1.6 3,287,328 + -0.6 3,287,328 + +0.4 3,287,328 + -0.4 3,287,328 + +0.3 3,287,329 - +0.3 3,287,329 - -0.7 3,287,329 - +1.4 3,287,329 - -0.5 3,287,329 - -0.4 3,287,329 - +1.5 3,287,375 - +0.2 3,287,391 + +0.7 3,287,392 - -1.5 3,287,392 - +0.2 3,287,392 - -0.5 3,287,514 + -0.1 3,287,514 + +1.0 3,287,514 + -0.9 3,287,514 + +0.3 3,287,515 - +2.1 3,287,515 - +0.6 3,287,515 - +0.6 3,287,515 - -0.1 3,287,547 + -1.1 3,287,548 - +0.6 3,287,548 - +0.1 3,287,739 + OH686_15770 0.11 -0.7 3,287,851 + OH686_15770 0.14 +1.5 3,287,851 + OH686_15770 0.14 -0.3 3,287,852 - OH686_15770 0.14 -0.2 3,287,852 - OH686_15770 0.14 +0.8 3,287,852 - OH686_15770 0.14 -0.8 3,287,852 - OH686_15770 0.14 -0.4 3,287,852 - OH686_15770 0.14 -0.7 3,287,911 + OH686_15770 0.16 -2.4 3,287,911 + OH686_15770 0.16 -0.3 3,287,911 + OH686_15770 0.16 -1.2 3,287,911 + OH686_15770 0.16 +0.6 3,287,912 - OH686_15770 0.16 -0.3 3,287,912 - OH686_15770 0.16 +0.4 3,287,926 + OH686_15770 0.16 +0.3 3,287,926 + OH686_15770 0.16 -1.3 3,287,926 + OH686_15770 0.16 +0.2 3,287,927 - OH686_15770 0.16 +0.5 3,287,927 - OH686_15770 0.16 +0.5 3,287,927 - OH686_15770 0.16 -0.3 3,287,927 - OH686_15770 0.16 -0.2 3,288,053 + OH686_15770 0.20 -0.2 3,288,054 - OH686_15770 0.20 -0.9 3,288,054 - OH686_15770 0.20 -2.5 3,288,054 - OH686_15770 0.20 -0.3 3,288,054 - OH686_15770 0.20 +0.6 3,288,054 - OH686_15770 0.20 -0.5 3,288,102 + OH686_15770 0.22 +1.2 3,288,103 - OH686_15770 0.22 -0.9 3,288,103 - OH686_15770 0.22 +0.4 3,288,103 - OH686_15770 0.22 +0.6 3,288,186 + OH686_15770 0.24 +1.1 3,288,187 - OH686_15770 0.24 -2.1 3,288,187 - OH686_15770 0.24 -2.0 3,288,195 + OH686_15770 0.25 -0.7 3,288,195 + OH686_15770 0.25 +0.9 3,288,195 + OH686_15770 0.25 -0.0 3,288,195 + OH686_15770 0.25 -2.2 3,288,195 + OH686_15770 0.25 -0.6 3,288,196 - OH686_15770 0.25 -0.0 3,288,196 - OH686_15770 0.25 -0.0 3,288,196 - OH686_15770 0.25 +0.4 3,288,196 - OH686_15770 0.25 -1.1 3,288,196 - OH686_15770 0.25 +1.3 3,288,196 - OH686_15770 0.25 -0.8 3,288,196 - OH686_15770 0.25 +0.0
Or see this region's nucleotide sequence