Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_14145 and OH686_14150 are separated by 125 nucleotides OH686_14150 and OH686_14155 are separated by 78 nucleotides OH686_14155 and OH686_14160 are separated by 163 nucleotides
OH686_14145: OH686_14145 - Uncharacterized ferredoxin-like protein YfhL, at 2,955,446 to 2,955,697
_14145
OH686_14150: OH686_14150 - pantetheine-phosphate adenylyltransferase, at 2,955,823 to 2,956,302
_14150
OH686_14155: OH686_14155 - hypothetical protein, at 2,956,381 to 2,956,764
_14155
OH686_14160: OH686_14160 - Oxidoreductase, GMC family, at 2,956,928 to 2,958,520
_14160
Position (kb)
2956
2957 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2955.390 kb on + strand at 2955.390 kb on + strand at 2955.391 kb on - strand at 2955.391 kb on - strand at 2955.398 kb on + strand at 2955.398 kb on + strand at 2955.399 kb on - strand at 2955.399 kb on - strand at 2955.471 kb on + strand at 2955.471 kb on + strand at 2955.471 kb on + strand at 2955.471 kb on + strand at 2955.471 kb on + strand at 2955.472 kb on - strand, within OH686_14145 at 2955.472 kb on - strand, within OH686_14145 at 2955.472 kb on - strand, within OH686_14145 at 2956.343 kb on - strand at 2956.460 kb on - strand, within OH686_14155 at 2956.484 kb on + strand, within OH686_14155 at 2956.484 kb on + strand, within OH686_14155 at 2956.484 kb on + strand, within OH686_14155 at 2956.484 kb on + strand, within OH686_14155 at 2956.485 kb on - strand, within OH686_14155 at 2956.485 kb on - strand, within OH686_14155 at 2956.554 kb on + strand, within OH686_14155 at 2956.554 kb on + strand, within OH686_14155 at 2956.667 kb on + strand, within OH686_14155 at 2956.667 kb on + strand, within OH686_14155 at 2956.777 kb on + strand at 2956.777 kb on + strand at 2956.778 kb on - strand at 2956.778 kb on - strand at 2956.778 kb on - strand at 2956.843 kb on + strand at 2956.843 kb on + strand at 2956.843 kb on + strand at 2956.844 kb on - strand at 2956.844 kb on - strand at 2956.844 kb on - strand at 2956.844 kb on - strand at 2956.844 kb on - strand at 2956.853 kb on + strand at 2956.853 kb on + strand at 2956.854 kb on - strand at 2956.854 kb on - strand at 2956.876 kb on + strand at 2956.876 kb on + strand at 2956.876 kb on + strand at 2956.876 kb on + strand at 2956.877 kb on - strand at 2956.877 kb on - strand at 2956.877 kb on - strand at 2956.877 kb on - strand at 2956.904 kb on + strand at 2956.904 kb on + strand at 2956.904 kb on + strand at 2956.904 kb on + strand at 2956.905 kb on - strand at 2956.929 kb on + strand at 2956.929 kb on + strand at 2956.929 kb on + strand at 2956.929 kb on + strand at 2956.929 kb on + strand at 2956.929 kb on + strand at 2956.929 kb on + strand at 2956.930 kb on - strand at 2956.930 kb on - strand at 2956.930 kb on - strand at 2956.930 kb on - strand at 2956.930 kb on - strand at 2956.980 kb on + strand at 2956.980 kb on + strand at 2956.980 kb on + strand at 2956.980 kb on + strand at 2956.980 kb on + strand at 2956.981 kb on - strand at 2957.208 kb on + strand, within OH686_14160 at 2957.208 kb on + strand, within OH686_14160 at 2957.208 kb on + strand, within OH686_14160 at 2957.208 kb on + strand, within OH686_14160 at 2957.209 kb on - strand, within OH686_14160 at 2957.209 kb on - strand, within OH686_14160 at 2957.209 kb on - strand, within OH686_14160 at 2957.209 kb on - strand, within OH686_14160 at 2957.307 kb on + strand, within OH686_14160 at 2957.307 kb on + strand, within OH686_14160 at 2957.307 kb on + strand, within OH686_14160 at 2957.307 kb on + strand, within OH686_14160 at 2957.308 kb on - strand, within OH686_14160 at 2957.308 kb on - strand, within OH686_14160 at 2957.308 kb on - strand, within OH686_14160 at 2957.308 kb on - strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.517 kb on + strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.518 kb on - strand, within OH686_14160 at 2957.565 kb on + strand, within OH686_14160 at 2957.565 kb on + strand, within OH686_14160 at 2957.565 kb on + strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.566 kb on - strand, within OH686_14160 at 2957.586 kb on + strand, within OH686_14160 at 2957.586 kb on + strand, within OH686_14160 at 2957.586 kb on + strand, within OH686_14160 at 2957.587 kb on - strand, within OH686_14160 at 2957.587 kb on - strand, within OH686_14160 at 2957.587 kb on - strand, within OH686_14160 at 2957.587 kb on - strand, within OH686_14160 at 2957.587 kb on - strand, within OH686_14160 at 2957.733 kb on + strand, within OH686_14160 at 2957.733 kb on + strand, within OH686_14160 at 2957.733 kb on + strand, within OH686_14160 at 2957.733 kb on + strand, within OH686_14160 at 2957.733 kb on + strand, within OH686_14160 at 2957.733 kb on + strand, within OH686_14160 at 2957.733 kb on + strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160 at 2957.734 kb on - strand, within OH686_14160
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 2,955,390 + +0.9 2,955,390 + -0.0 2,955,391 - +0.7 2,955,391 - -0.0 2,955,398 + -0.8 2,955,398 + -0.7 2,955,399 - +0.2 2,955,399 - -0.6 2,955,471 + -0.3 2,955,471 + +0.0 2,955,471 + +0.2 2,955,471 + -1.4 2,955,471 + +1.3 2,955,472 - OH686_14145 0.10 -0.5 2,955,472 - OH686_14145 0.10 -1.7 2,955,472 - OH686_14145 0.10 -2.5 2,956,343 - -0.2 2,956,460 - OH686_14155 0.21 +0.4 2,956,484 + OH686_14155 0.27 +0.7 2,956,484 + OH686_14155 0.27 -1.6 2,956,484 + OH686_14155 0.27 +0.1 2,956,484 + OH686_14155 0.27 -0.7 2,956,485 - OH686_14155 0.27 -0.3 2,956,485 - OH686_14155 0.27 -0.7 2,956,554 + OH686_14155 0.45 +1.0 2,956,554 + OH686_14155 0.45 +1.3 2,956,667 + OH686_14155 0.74 -0.6 2,956,667 + OH686_14155 0.74 -1.5 2,956,777 + -0.1 2,956,777 + +1.5 2,956,778 - +0.9 2,956,778 - -0.8 2,956,778 - -0.7 2,956,843 + +0.8 2,956,843 + +2.7 2,956,843 + -0.0 2,956,844 - -0.2 2,956,844 - -0.8 2,956,844 - -0.2 2,956,844 - -1.3 2,956,844 - -1.3 2,956,853 + +0.3 2,956,853 + +0.9 2,956,854 - -0.5 2,956,854 - +1.7 2,956,876 + -1.5 2,956,876 + -0.7 2,956,876 + -0.1 2,956,876 + +0.1 2,956,877 - -0.6 2,956,877 - -0.2 2,956,877 - -0.1 2,956,877 - -1.5 2,956,904 + +0.2 2,956,904 + +0.8 2,956,904 + +0.1 2,956,904 + -0.4 2,956,905 - -0.5 2,956,929 + -2.7 2,956,929 + -0.7 2,956,929 + +1.0 2,956,929 + -0.5 2,956,929 + -0.3 2,956,929 + +1.5 2,956,929 + -3.0 2,956,930 - +1.3 2,956,930 - -0.1 2,956,930 - +1.3 2,956,930 - +0.5 2,956,930 - +1.0 2,956,980 + -0.9 2,956,980 + -2.0 2,956,980 + -1.4 2,956,980 + -0.5 2,956,980 + -0.8 2,956,981 - -0.1 2,957,208 + OH686_14160 0.18 -0.6 2,957,208 + OH686_14160 0.18 -2.5 2,957,208 + OH686_14160 0.18 -2.8 2,957,208 + OH686_14160 0.18 -2.4 2,957,209 - OH686_14160 0.18 -0.8 2,957,209 - OH686_14160 0.18 -1.8 2,957,209 - OH686_14160 0.18 -0.5 2,957,209 - OH686_14160 0.18 -2.0 2,957,307 + OH686_14160 0.24 +0.1 2,957,307 + OH686_14160 0.24 -0.7 2,957,307 + OH686_14160 0.24 -1.4 2,957,307 + OH686_14160 0.24 +0.5 2,957,308 - OH686_14160 0.24 -0.6 2,957,308 - OH686_14160 0.24 -0.7 2,957,308 - OH686_14160 0.24 -1.4 2,957,308 - OH686_14160 0.24 -2.8 2,957,517 + OH686_14160 0.37 +0.2 2,957,517 + OH686_14160 0.37 -0.9 2,957,517 + OH686_14160 0.37 -2.2 2,957,517 + OH686_14160 0.37 -1.4 2,957,517 + OH686_14160 0.37 +1.0 2,957,517 + OH686_14160 0.37 +0.3 2,957,517 + OH686_14160 0.37 +0.1 2,957,517 + OH686_14160 0.37 -1.9 2,957,517 + OH686_14160 0.37 +0.5 2,957,517 + OH686_14160 0.37 +0.3 2,957,517 + OH686_14160 0.37 +2.3 2,957,518 - OH686_14160 0.37 +1.5 2,957,518 - OH686_14160 0.37 +1.0 2,957,518 - OH686_14160 0.37 -0.2 2,957,518 - OH686_14160 0.37 +0.5 2,957,518 - OH686_14160 0.37 +0.7 2,957,518 - OH686_14160 0.37 -0.2 2,957,518 - OH686_14160 0.37 -1.5 2,957,518 - OH686_14160 0.37 +1.2 2,957,518 - OH686_14160 0.37 -0.2 2,957,518 - OH686_14160 0.37 +0.2 2,957,565 + OH686_14160 0.40 -0.2 2,957,565 + OH686_14160 0.40 +0.5 2,957,565 + OH686_14160 0.40 -2.0 2,957,566 - OH686_14160 0.40 +0.7 2,957,566 - OH686_14160 0.40 -0.2 2,957,566 - OH686_14160 0.40 -0.5 2,957,566 - OH686_14160 0.40 -2.2 2,957,566 - OH686_14160 0.40 -0.8 2,957,566 - OH686_14160 0.40 -0.6 2,957,566 - OH686_14160 0.40 -1.2 2,957,566 - OH686_14160 0.40 -0.2 2,957,566 - OH686_14160 0.40 +0.5 2,957,586 + OH686_14160 0.41 -0.2 2,957,586 + OH686_14160 0.41 +0.6 2,957,586 + OH686_14160 0.41 +0.5 2,957,587 - OH686_14160 0.41 +0.7 2,957,587 - OH686_14160 0.41 -1.0 2,957,587 - OH686_14160 0.41 -0.8 2,957,587 - OH686_14160 0.41 -0.7 2,957,587 - OH686_14160 0.41 -0.2 2,957,733 + OH686_14160 0.51 +1.3 2,957,733 + OH686_14160 0.51 +0.8 2,957,733 + OH686_14160 0.51 +0.9 2,957,733 + OH686_14160 0.51 +0.6 2,957,733 + OH686_14160 0.51 +1.1 2,957,733 + OH686_14160 0.51 -0.2 2,957,733 + OH686_14160 0.51 -0.4 2,957,734 - OH686_14160 0.51 +0.0 2,957,734 - OH686_14160 0.51 -0.7 2,957,734 - OH686_14160 0.51 +0.8 2,957,734 - OH686_14160 0.51 -0.6 2,957,734 - OH686_14160 0.51 +0.4 2,957,734 - OH686_14160 0.51 -0.0 2,957,734 - OH686_14160 0.51 +0.2 2,957,734 - OH686_14160 0.51 +0.7
Or see this region's nucleotide sequence