Strain Fitness in Pseudomonas sp. S08-1 around OH686_14155

Experiment: octanoate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_14145 and OH686_14150 are separated by 125 nucleotidesOH686_14150 and OH686_14155 are separated by 78 nucleotidesOH686_14155 and OH686_14160 are separated by 163 nucleotides OH686_14145: OH686_14145 - Uncharacterized ferredoxin-like protein YfhL, at 2,955,446 to 2,955,697 _14145 OH686_14150: OH686_14150 - pantetheine-phosphate adenylyltransferase, at 2,955,823 to 2,956,302 _14150 OH686_14155: OH686_14155 - hypothetical protein, at 2,956,381 to 2,956,764 _14155 OH686_14160: OH686_14160 - Oxidoreductase, GMC family, at 2,956,928 to 2,958,520 _14160 Position (kb) 2956 2957Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2955.390 kb on + strandat 2955.390 kb on + strandat 2955.391 kb on - strandat 2955.391 kb on - strandat 2955.398 kb on + strandat 2955.398 kb on + strandat 2955.399 kb on - strandat 2955.399 kb on - strandat 2955.471 kb on + strandat 2955.471 kb on + strandat 2955.471 kb on + strandat 2955.471 kb on + strandat 2955.471 kb on + strandat 2955.472 kb on - strand, within OH686_14145at 2955.472 kb on - strand, within OH686_14145at 2955.472 kb on - strand, within OH686_14145at 2956.343 kb on - strandat 2956.460 kb on - strand, within OH686_14155at 2956.484 kb on + strand, within OH686_14155at 2956.484 kb on + strand, within OH686_14155at 2956.484 kb on + strand, within OH686_14155at 2956.484 kb on + strand, within OH686_14155at 2956.485 kb on - strand, within OH686_14155at 2956.485 kb on - strand, within OH686_14155at 2956.554 kb on + strand, within OH686_14155at 2956.554 kb on + strand, within OH686_14155at 2956.667 kb on + strand, within OH686_14155at 2956.667 kb on + strand, within OH686_14155at 2956.777 kb on + strandat 2956.777 kb on + strandat 2956.778 kb on - strandat 2956.778 kb on - strandat 2956.778 kb on - strandat 2956.843 kb on + strandat 2956.843 kb on + strandat 2956.843 kb on + strandat 2956.844 kb on - strandat 2956.844 kb on - strandat 2956.844 kb on - strandat 2956.844 kb on - strandat 2956.844 kb on - strandat 2956.853 kb on + strandat 2956.853 kb on + strandat 2956.854 kb on - strandat 2956.854 kb on - strandat 2956.876 kb on + strandat 2956.876 kb on + strandat 2956.876 kb on + strandat 2956.876 kb on + strandat 2956.877 kb on - strandat 2956.877 kb on - strandat 2956.877 kb on - strandat 2956.877 kb on - strandat 2956.904 kb on + strandat 2956.904 kb on + strandat 2956.904 kb on + strandat 2956.904 kb on + strandat 2956.905 kb on - strandat 2956.929 kb on + strandat 2956.929 kb on + strandat 2956.929 kb on + strandat 2956.929 kb on + strandat 2956.929 kb on + strandat 2956.929 kb on + strandat 2956.929 kb on + strandat 2956.930 kb on - strandat 2956.930 kb on - strandat 2956.930 kb on - strandat 2956.930 kb on - strandat 2956.930 kb on - strandat 2956.980 kb on + strandat 2956.980 kb on + strandat 2956.980 kb on + strandat 2956.980 kb on + strandat 2956.980 kb on + strandat 2956.981 kb on - strandat 2957.208 kb on + strand, within OH686_14160at 2957.208 kb on + strand, within OH686_14160at 2957.208 kb on + strand, within OH686_14160at 2957.208 kb on + strand, within OH686_14160at 2957.209 kb on - strand, within OH686_14160at 2957.209 kb on - strand, within OH686_14160at 2957.209 kb on - strand, within OH686_14160at 2957.209 kb on - strand, within OH686_14160at 2957.307 kb on + strand, within OH686_14160at 2957.307 kb on + strand, within OH686_14160at 2957.307 kb on + strand, within OH686_14160at 2957.307 kb on + strand, within OH686_14160at 2957.308 kb on - strand, within OH686_14160at 2957.308 kb on - strand, within OH686_14160at 2957.308 kb on - strand, within OH686_14160at 2957.308 kb on - strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.517 kb on + strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.518 kb on - strand, within OH686_14160at 2957.565 kb on + strand, within OH686_14160at 2957.565 kb on + strand, within OH686_14160at 2957.565 kb on + strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.566 kb on - strand, within OH686_14160at 2957.586 kb on + strand, within OH686_14160at 2957.586 kb on + strand, within OH686_14160at 2957.586 kb on + strand, within OH686_14160at 2957.587 kb on - strand, within OH686_14160at 2957.587 kb on - strand, within OH686_14160at 2957.587 kb on - strand, within OH686_14160at 2957.587 kb on - strand, within OH686_14160at 2957.587 kb on - strand, within OH686_14160at 2957.733 kb on + strand, within OH686_14160at 2957.733 kb on + strand, within OH686_14160at 2957.733 kb on + strand, within OH686_14160at 2957.733 kb on + strand, within OH686_14160at 2957.733 kb on + strand, within OH686_14160at 2957.733 kb on + strand, within OH686_14160at 2957.733 kb on + strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160at 2957.734 kb on - strand, within OH686_14160

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (C)
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2,955,390 + +0.9
2,955,390 + -0.0
2,955,391 - +0.7
2,955,391 - -0.0
2,955,398 + -0.8
2,955,398 + -0.7
2,955,399 - +0.2
2,955,399 - -0.6
2,955,471 + -0.3
2,955,471 + +0.0
2,955,471 + +0.2
2,955,471 + -1.4
2,955,471 + +1.3
2,955,472 - OH686_14145 0.10 -0.5
2,955,472 - OH686_14145 0.10 -1.7
2,955,472 - OH686_14145 0.10 -2.5
2,956,343 - -0.2
2,956,460 - OH686_14155 0.21 +0.4
2,956,484 + OH686_14155 0.27 +0.7
2,956,484 + OH686_14155 0.27 -1.6
2,956,484 + OH686_14155 0.27 +0.1
2,956,484 + OH686_14155 0.27 -0.7
2,956,485 - OH686_14155 0.27 -0.3
2,956,485 - OH686_14155 0.27 -0.7
2,956,554 + OH686_14155 0.45 +1.0
2,956,554 + OH686_14155 0.45 +1.3
2,956,667 + OH686_14155 0.74 -0.6
2,956,667 + OH686_14155 0.74 -1.5
2,956,777 + -0.1
2,956,777 + +1.5
2,956,778 - +0.9
2,956,778 - -0.8
2,956,778 - -0.7
2,956,843 + +0.8
2,956,843 + +2.7
2,956,843 + -0.0
2,956,844 - -0.2
2,956,844 - -0.8
2,956,844 - -0.2
2,956,844 - -1.3
2,956,844 - -1.3
2,956,853 + +0.3
2,956,853 + +0.9
2,956,854 - -0.5
2,956,854 - +1.7
2,956,876 + -1.5
2,956,876 + -0.7
2,956,876 + -0.1
2,956,876 + +0.1
2,956,877 - -0.6
2,956,877 - -0.2
2,956,877 - -0.1
2,956,877 - -1.5
2,956,904 + +0.2
2,956,904 + +0.8
2,956,904 + +0.1
2,956,904 + -0.4
2,956,905 - -0.5
2,956,929 + -2.7
2,956,929 + -0.7
2,956,929 + +1.0
2,956,929 + -0.5
2,956,929 + -0.3
2,956,929 + +1.5
2,956,929 + -3.0
2,956,930 - +1.3
2,956,930 - -0.1
2,956,930 - +1.3
2,956,930 - +0.5
2,956,930 - +1.0
2,956,980 + -0.9
2,956,980 + -2.0
2,956,980 + -1.4
2,956,980 + -0.5
2,956,980 + -0.8
2,956,981 - -0.1
2,957,208 + OH686_14160 0.18 -0.6
2,957,208 + OH686_14160 0.18 -2.5
2,957,208 + OH686_14160 0.18 -2.8
2,957,208 + OH686_14160 0.18 -2.4
2,957,209 - OH686_14160 0.18 -0.8
2,957,209 - OH686_14160 0.18 -1.8
2,957,209 - OH686_14160 0.18 -0.5
2,957,209 - OH686_14160 0.18 -2.0
2,957,307 + OH686_14160 0.24 +0.1
2,957,307 + OH686_14160 0.24 -0.7
2,957,307 + OH686_14160 0.24 -1.4
2,957,307 + OH686_14160 0.24 +0.5
2,957,308 - OH686_14160 0.24 -0.6
2,957,308 - OH686_14160 0.24 -0.7
2,957,308 - OH686_14160 0.24 -1.4
2,957,308 - OH686_14160 0.24 -2.8
2,957,517 + OH686_14160 0.37 +0.2
2,957,517 + OH686_14160 0.37 -0.9
2,957,517 + OH686_14160 0.37 -2.2
2,957,517 + OH686_14160 0.37 -1.4
2,957,517 + OH686_14160 0.37 +1.0
2,957,517 + OH686_14160 0.37 +0.3
2,957,517 + OH686_14160 0.37 +0.1
2,957,517 + OH686_14160 0.37 -1.9
2,957,517 + OH686_14160 0.37 +0.5
2,957,517 + OH686_14160 0.37 +0.3
2,957,517 + OH686_14160 0.37 +2.3
2,957,518 - OH686_14160 0.37 +1.5
2,957,518 - OH686_14160 0.37 +1.0
2,957,518 - OH686_14160 0.37 -0.2
2,957,518 - OH686_14160 0.37 +0.5
2,957,518 - OH686_14160 0.37 +0.7
2,957,518 - OH686_14160 0.37 -0.2
2,957,518 - OH686_14160 0.37 -1.5
2,957,518 - OH686_14160 0.37 +1.2
2,957,518 - OH686_14160 0.37 -0.2
2,957,518 - OH686_14160 0.37 +0.2
2,957,565 + OH686_14160 0.40 -0.2
2,957,565 + OH686_14160 0.40 +0.5
2,957,565 + OH686_14160 0.40 -2.0
2,957,566 - OH686_14160 0.40 +0.7
2,957,566 - OH686_14160 0.40 -0.2
2,957,566 - OH686_14160 0.40 -0.5
2,957,566 - OH686_14160 0.40 -2.2
2,957,566 - OH686_14160 0.40 -0.8
2,957,566 - OH686_14160 0.40 -0.6
2,957,566 - OH686_14160 0.40 -1.2
2,957,566 - OH686_14160 0.40 -0.2
2,957,566 - OH686_14160 0.40 +0.5
2,957,586 + OH686_14160 0.41 -0.2
2,957,586 + OH686_14160 0.41 +0.6
2,957,586 + OH686_14160 0.41 +0.5
2,957,587 - OH686_14160 0.41 +0.7
2,957,587 - OH686_14160 0.41 -1.0
2,957,587 - OH686_14160 0.41 -0.8
2,957,587 - OH686_14160 0.41 -0.7
2,957,587 - OH686_14160 0.41 -0.2
2,957,733 + OH686_14160 0.51 +1.3
2,957,733 + OH686_14160 0.51 +0.8
2,957,733 + OH686_14160 0.51 +0.9
2,957,733 + OH686_14160 0.51 +0.6
2,957,733 + OH686_14160 0.51 +1.1
2,957,733 + OH686_14160 0.51 -0.2
2,957,733 + OH686_14160 0.51 -0.4
2,957,734 - OH686_14160 0.51 +0.0
2,957,734 - OH686_14160 0.51 -0.7
2,957,734 - OH686_14160 0.51 +0.8
2,957,734 - OH686_14160 0.51 -0.6
2,957,734 - OH686_14160 0.51 +0.4
2,957,734 - OH686_14160 0.51 -0.0
2,957,734 - OH686_14160 0.51 +0.2
2,957,734 - OH686_14160 0.51 +0.7

Or see this region's nucleotide sequence