Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20755 and CA264_20760 are separated by 240 nucleotides CA264_20760 and CA264_20765 overlap by 13 nucleotides CA264_20765 and CA264_20770 are separated by 3 nucleotides
CA264_20755: CA264_20755 - hypothetical protein, at 11,268 to 12,029
_20755
CA264_20760: CA264_20760 - hypothetical protein, at 12,270 to 13,040
_20760
CA264_20765: CA264_20765 - hypothetical protein, at 13,028 to 13,789
_20765
CA264_20770: CA264_20770 - oxidoreductase, at 13,793 to 15,757
_20770
Position (kb)
13
14 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 12.115 kb on + strand at 12.120 kb on - strand at 12.120 kb on - strand at 12.146 kb on - strand at 12.181 kb on + strand at 12.184 kb on - strand at 12.186 kb on + strand at 12.187 kb on - strand at 12.255 kb on + strand at 12.256 kb on - strand at 12.317 kb on + strand at 12.318 kb on - strand at 12.334 kb on + strand at 12.334 kb on + strand at 12.348 kb on + strand, within CA264_20760 at 12.348 kb on + strand, within CA264_20760 at 12.606 kb on - strand, within CA264_20760 at 12.612 kb on + strand, within CA264_20760 at 12.634 kb on - strand, within CA264_20760 at 12.729 kb on + strand, within CA264_20760 at 12.729 kb on + strand, within CA264_20760 at 12.729 kb on + strand, within CA264_20760 at 12.730 kb on - strand, within CA264_20760 at 12.749 kb on + strand, within CA264_20760 at 12.876 kb on - strand, within CA264_20760 at 12.931 kb on - strand, within CA264_20760 at 12.931 kb on - strand, within CA264_20760 at 12.953 kb on + strand, within CA264_20760 at 12.954 kb on - strand, within CA264_20760 at 12.954 kb on - strand, within CA264_20760 at 12.956 kb on + strand, within CA264_20760 at 12.957 kb on - strand, within CA264_20760 at 12.957 kb on - strand, within CA264_20760 at 12.972 kb on - strand at 12.972 kb on - strand at 12.975 kb on - strand at 12.978 kb on + strand at 13.012 kb on - strand at 13.012 kb on - strand at 13.012 kb on - strand at 13.012 kb on - strand at 13.016 kb on + strand at 13.111 kb on + strand, within CA264_20765 at 13.119 kb on + strand, within CA264_20765 at 13.170 kb on + strand, within CA264_20765 at 13.202 kb on + strand, within CA264_20765 at 13.203 kb on - strand, within CA264_20765 at 13.264 kb on + strand, within CA264_20765 at 13.267 kb on + strand, within CA264_20765 at 13.267 kb on + strand, within CA264_20765 at 13.267 kb on + strand, within CA264_20765 at 13.268 kb on - strand, within CA264_20765 at 13.302 kb on + strand, within CA264_20765 at 13.302 kb on + strand, within CA264_20765 at 13.303 kb on - strand, within CA264_20765 at 13.354 kb on - strand, within CA264_20765 at 13.354 kb on - strand, within CA264_20765 at 13.354 kb on - strand, within CA264_20765 at 13.411 kb on - strand, within CA264_20765 at 13.422 kb on + strand, within CA264_20765 at 13.423 kb on - strand, within CA264_20765 at 13.446 kb on - strand, within CA264_20765 at 13.450 kb on + strand, within CA264_20765 at 13.523 kb on + strand, within CA264_20765 at 13.523 kb on + strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.524 kb on - strand, within CA264_20765 at 13.525 kb on + strand, within CA264_20765 at 13.526 kb on - strand, within CA264_20765 at 13.543 kb on + strand, within CA264_20765 at 13.545 kb on + strand, within CA264_20765 at 13.545 kb on + strand, within CA264_20765 at 13.546 kb on - strand, within CA264_20765 at 13.546 kb on - strand, within CA264_20765 at 13.546 kb on - strand, within CA264_20765 at 13.560 kb on - strand, within CA264_20765 at 13.742 kb on - strand at 13.768 kb on + strand at 13.790 kb on - strand at 13.790 kb on - strand at 13.883 kb on + strand at 13.884 kb on - strand at 13.884 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.928 kb on - strand at 13.953 kb on + strand at 13.954 kb on - strand at 13.960 kb on + strand at 13.961 kb on - strand at 13.964 kb on + strand at 13.964 kb on + strand at 13.965 kb on - strand at 14.010 kb on - strand, within CA264_20770 at 14.041 kb on + strand, within CA264_20770 at 14.271 kb on - strand, within CA264_20770 at 14.273 kb on + strand, within CA264_20770 at 14.274 kb on - strand, within CA264_20770 at 14.274 kb on - strand, within CA264_20770 at 14.400 kb on + strand, within CA264_20770 at 14.401 kb on - strand, within CA264_20770 at 14.401 kb on - strand, within CA264_20770 at 14.405 kb on + strand, within CA264_20770 at 14.405 kb on + strand, within CA264_20770 at 14.425 kb on + strand, within CA264_20770 at 14.441 kb on - strand, within CA264_20770 at 14.447 kb on - strand, within CA264_20770 at 14.447 kb on - strand, within CA264_20770 at 14.612 kb on + strand, within CA264_20770 at 14.614 kb on + strand, within CA264_20770 at 14.615 kb on - strand, within CA264_20770 at 14.634 kb on + strand, within CA264_20770 at 14.683 kb on - strand, within CA264_20770 at 14.713 kb on + strand, within CA264_20770 at 14.714 kb on - strand, within CA264_20770 at 14.715 kb on + strand, within CA264_20770 at 14.716 kb on - strand, within CA264_20770 at 14.725 kb on + strand, within CA264_20770 at 14.759 kb on - strand, within CA264_20770
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 12,115 + +0.5 12,120 - -0.9 12,120 - -1.1 12,146 - -0.9 12,181 + +0.4 12,184 - +0.3 12,186 + -0.4 12,187 - +0.1 12,255 + -0.6 12,256 - -0.2 12,317 + -0.3 12,318 - -0.5 12,334 + +1.2 12,334 + -0.8 12,348 + CA264_20760 0.10 -0.8 12,348 + CA264_20760 0.10 -0.4 12,606 - CA264_20760 0.44 +0.7 12,612 + CA264_20760 0.44 +0.4 12,634 - CA264_20760 0.47 +0.4 12,729 + CA264_20760 0.60 -1.0 12,729 + CA264_20760 0.60 +0.6 12,729 + CA264_20760 0.60 -0.5 12,730 - CA264_20760 0.60 +0.6 12,749 + CA264_20760 0.62 +0.2 12,876 - CA264_20760 0.79 -0.5 12,931 - CA264_20760 0.86 -0.2 12,931 - CA264_20760 0.86 +0.5 12,953 + CA264_20760 0.89 -0.4 12,954 - CA264_20760 0.89 +0.0 12,954 - CA264_20760 0.89 -1.0 12,956 + CA264_20760 0.89 +0.8 12,957 - CA264_20760 0.89 +1.0 12,957 - CA264_20760 0.89 +0.2 12,972 - -0.8 12,972 - -0.2 12,975 - -0.1 12,978 + -1.1 13,012 - -0.2 13,012 - -0.3 13,012 - -0.4 13,012 - -0.4 13,016 + +0.9 13,111 + CA264_20765 0.11 +0.4 13,119 + CA264_20765 0.12 -0.1 13,170 + CA264_20765 0.19 -0.3 13,202 + CA264_20765 0.23 -1.1 13,203 - CA264_20765 0.23 -0.8 13,264 + CA264_20765 0.31 +0.7 13,267 + CA264_20765 0.31 -0.0 13,267 + CA264_20765 0.31 -0.3 13,267 + CA264_20765 0.31 -1.1 13,268 - CA264_20765 0.31 +0.8 13,302 + CA264_20765 0.36 -0.0 13,302 + CA264_20765 0.36 -0.1 13,303 - CA264_20765 0.36 -0.4 13,354 - CA264_20765 0.43 -0.4 13,354 - CA264_20765 0.43 -0.1 13,354 - CA264_20765 0.43 -0.2 13,411 - CA264_20765 0.50 -1.6 13,422 + CA264_20765 0.52 -0.1 13,423 - CA264_20765 0.52 +1.1 13,446 - CA264_20765 0.55 -0.3 13,450 + CA264_20765 0.55 -0.4 13,523 + CA264_20765 0.65 +0.7 13,523 + CA264_20765 0.65 -1.2 13,524 - CA264_20765 0.65 -0.7 13,524 - CA264_20765 0.65 +0.5 13,524 - CA264_20765 0.65 -1.7 13,524 - CA264_20765 0.65 +0.8 13,524 - CA264_20765 0.65 +0.2 13,524 - CA264_20765 0.65 -0.2 13,525 + CA264_20765 0.65 -0.1 13,526 - CA264_20765 0.65 +0.8 13,543 + CA264_20765 0.68 -2.7 13,545 + CA264_20765 0.68 -0.5 13,545 + CA264_20765 0.68 -0.3 13,546 - CA264_20765 0.68 +0.4 13,546 - CA264_20765 0.68 +1.8 13,546 - CA264_20765 0.68 -0.6 13,560 - CA264_20765 0.70 -0.8 13,742 - -0.1 13,768 + -0.1 13,790 - +0.6 13,790 - +0.2 13,883 + -0.2 13,884 - +0.6 13,884 - -1.1 13,896 - -0.7 13,896 - +1.2 13,896 - -0.6 13,928 - +0.0 13,953 + -0.5 13,954 - -1.3 13,960 + -0.2 13,961 - -0.9 13,964 + +0.1 13,964 + -0.5 13,965 - +0.5 14,010 - CA264_20770 0.11 -0.0 14,041 + CA264_20770 0.13 -0.2 14,271 - CA264_20770 0.24 -0.4 14,273 + CA264_20770 0.24 -0.1 14,274 - CA264_20770 0.24 -0.3 14,274 - CA264_20770 0.24 +0.1 14,400 + CA264_20770 0.31 -0.1 14,401 - CA264_20770 0.31 +0.8 14,401 - CA264_20770 0.31 +0.2 14,405 + CA264_20770 0.31 +0.4 14,405 + CA264_20770 0.31 -1.0 14,425 + CA264_20770 0.32 -0.4 14,441 - CA264_20770 0.33 -0.0 14,447 - CA264_20770 0.33 -0.8 14,447 - CA264_20770 0.33 +0.5 14,612 + CA264_20770 0.42 +0.5 14,614 + CA264_20770 0.42 -0.5 14,615 - CA264_20770 0.42 +0.9 14,634 + CA264_20770 0.43 -0.1 14,683 - CA264_20770 0.45 -0.0 14,713 + CA264_20770 0.47 +0.2 14,714 - CA264_20770 0.47 -0.4 14,715 + CA264_20770 0.47 +0.2 14,716 - CA264_20770 0.47 +0.8 14,725 + CA264_20770 0.47 +0.0 14,759 - CA264_20770 0.49 -0.9
Or see this region's nucleotide sequence