Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19965 and CA264_19970 are separated by 203 nucleotides CA264_19970 and CA264_19975 are separated by 14 nucleotides
CA264_19965: CA264_19965 - dipeptidyl aminopeptidase, at 4,601,686 to 4,602,768
_19965
CA264_19970: CA264_19970 - hypothetical protein, at 4,602,972 to 4,603,226
_19970
CA264_19975: CA264_19975 - hypothetical protein, at 4,603,241 to 4,607,191
_19975
Position (kb)
4602
4603
4604 Strain fitness (log2 ratio)
-1
0
1
2 at 4601.996 kb on - strand, within CA264_19965 at 4601.997 kb on + strand, within CA264_19965 at 4602.042 kb on - strand, within CA264_19965 at 4602.119 kb on - strand, within CA264_19965 at 4602.119 kb on - strand, within CA264_19965 at 4602.129 kb on + strand, within CA264_19965 at 4602.130 kb on - strand, within CA264_19965 at 4602.130 kb on - strand, within CA264_19965 at 4602.132 kb on - strand, within CA264_19965 at 4602.150 kb on - strand, within CA264_19965 at 4602.279 kb on - strand, within CA264_19965 at 4602.322 kb on + strand, within CA264_19965 at 4602.419 kb on + strand, within CA264_19965 at 4602.419 kb on + strand, within CA264_19965 at 4602.545 kb on - strand, within CA264_19965 at 4602.545 kb on - strand, within CA264_19965 at 4602.568 kb on - strand, within CA264_19965 at 4602.568 kb on - strand, within CA264_19965 at 4602.574 kb on + strand, within CA264_19965 at 4602.574 kb on + strand, within CA264_19965 at 4602.584 kb on - strand, within CA264_19965 at 4602.744 kb on + strand at 4602.771 kb on - strand at 4602.771 kb on - strand at 4602.772 kb on + strand at 4602.815 kb on + strand at 4602.830 kb on - strand at 4603.012 kb on + strand, within CA264_19970 at 4603.063 kb on - strand, within CA264_19970 at 4603.235 kb on + strand at 4603.249 kb on + strand at 4603.262 kb on + strand at 4603.279 kb on + strand at 4603.280 kb on - strand at 4603.345 kb on - strand at 4603.382 kb on - strand at 4603.433 kb on + strand at 4603.433 kb on + strand at 4603.486 kb on + strand at 4603.489 kb on - strand at 4603.528 kb on + strand at 4603.538 kb on + strand at 4603.539 kb on - strand at 4603.712 kb on + strand, within CA264_19975 at 4603.713 kb on - strand, within CA264_19975 at 4603.713 kb on - strand, within CA264_19975 at 4603.824 kb on + strand, within CA264_19975 at 4603.824 kb on + strand, within CA264_19975 at 4603.829 kb on - strand, within CA264_19975 at 4603.831 kb on - strand, within CA264_19975 at 4603.863 kb on + strand, within CA264_19975 at 4603.895 kb on + strand, within CA264_19975 at 4603.895 kb on + strand, within CA264_19975 at 4603.953 kb on + strand, within CA264_19975 at 4603.977 kb on + strand, within CA264_19975 at 4604.056 kb on + strand, within CA264_19975 at 4604.056 kb on + strand, within CA264_19975
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 4,601,996 - CA264_19965 0.29 -0.6 4,601,997 + CA264_19965 0.29 -0.2 4,602,042 - CA264_19965 0.33 -0.1 4,602,119 - CA264_19965 0.40 -0.7 4,602,119 - CA264_19965 0.40 -0.7 4,602,129 + CA264_19965 0.41 -1.4 4,602,130 - CA264_19965 0.41 +1.0 4,602,130 - CA264_19965 0.41 -1.7 4,602,132 - CA264_19965 0.41 -0.2 4,602,150 - CA264_19965 0.43 -0.0 4,602,279 - CA264_19965 0.55 -0.3 4,602,322 + CA264_19965 0.59 -0.0 4,602,419 + CA264_19965 0.68 +1.3 4,602,419 + CA264_19965 0.68 -0.8 4,602,545 - CA264_19965 0.79 -0.2 4,602,545 - CA264_19965 0.79 +0.1 4,602,568 - CA264_19965 0.81 -0.2 4,602,568 - CA264_19965 0.81 +0.3 4,602,574 + CA264_19965 0.82 +1.4 4,602,574 + CA264_19965 0.82 +0.5 4,602,584 - CA264_19965 0.83 -0.1 4,602,744 + +0.3 4,602,771 - -1.1 4,602,771 - +1.7 4,602,772 + +0.2 4,602,815 + -0.4 4,602,830 - +0.6 4,603,012 + CA264_19970 0.16 -0.7 4,603,063 - CA264_19970 0.36 +0.6 4,603,235 + -0.6 4,603,249 + +1.0 4,603,262 + -0.3 4,603,279 + -0.6 4,603,280 - -0.1 4,603,345 - +0.8 4,603,382 - -0.2 4,603,433 + +0.1 4,603,433 + +0.3 4,603,486 + -1.5 4,603,489 - -1.5 4,603,528 + -1.0 4,603,538 + -0.3 4,603,539 - +0.6 4,603,712 + CA264_19975 0.12 +1.9 4,603,713 - CA264_19975 0.12 -0.4 4,603,713 - CA264_19975 0.12 +0.4 4,603,824 + CA264_19975 0.15 +0.4 4,603,824 + CA264_19975 0.15 +0.1 4,603,829 - CA264_19975 0.15 -1.3 4,603,831 - CA264_19975 0.15 +1.8 4,603,863 + CA264_19975 0.16 -0.5 4,603,895 + CA264_19975 0.17 +0.6 4,603,895 + CA264_19975 0.17 -0.2 4,603,953 + CA264_19975 0.18 -0.4 4,603,977 + CA264_19975 0.19 +0.4 4,604,056 + CA264_19975 0.21 -0.3 4,604,056 + CA264_19975 0.21 -1.4
Or see this region's nucleotide sequence