Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18500 and CA264_18505 are separated by 238 nucleotides CA264_18505 and CA264_18510 are separated by 196 nucleotides CA264_18510 and CA264_18515 are separated by 1 nucleotides
CA264_18500: CA264_18500 - dihydrolipoyl dehydrogenase, at 4,303,756 to 4,305,159
_18500
CA264_18505: CA264_18505 - ABC transporter ATP-binding protein, at 4,305,398 to 4,306,249
_18505
CA264_18510: CA264_18510 - hypothetical protein, at 4,306,446 to 4,307,192
_18510
CA264_18515: CA264_18515 - GntR family transcriptional regulator, at 4,307,194 to 4,307,565
_18515
Position (kb)
4305
4306
4307 Strain fitness (log2 ratio)
-2
-1
0
1 at 4305.157 kb on + strand at 4305.157 kb on + strand at 4305.174 kb on - strand at 4305.177 kb on + strand at 4305.178 kb on - strand at 4305.222 kb on + strand at 4305.278 kb on + strand at 4305.278 kb on + strand at 4305.419 kb on - strand at 4305.419 kb on - strand at 4305.429 kb on - strand at 4305.485 kb on - strand, within CA264_18505 at 4305.485 kb on - strand, within CA264_18505 at 4305.543 kb on + strand, within CA264_18505 at 4305.575 kb on - strand, within CA264_18505 at 4305.575 kb on - strand, within CA264_18505 at 4305.629 kb on + strand, within CA264_18505 at 4305.629 kb on + strand, within CA264_18505 at 4305.713 kb on - strand, within CA264_18505 at 4305.718 kb on + strand, within CA264_18505 at 4305.829 kb on + strand, within CA264_18505 at 4305.904 kb on + strand, within CA264_18505 at 4306.027 kb on + strand, within CA264_18505 at 4306.027 kb on + strand, within CA264_18505 at 4306.028 kb on - strand, within CA264_18505 at 4306.028 kb on - strand, within CA264_18505 at 4306.063 kb on + strand, within CA264_18505 at 4306.064 kb on - strand, within CA264_18505 at 4306.064 kb on - strand, within CA264_18505 at 4306.064 kb on - strand, within CA264_18505 at 4306.238 kb on + strand at 4306.239 kb on - strand at 4306.244 kb on + strand at 4306.248 kb on - strand at 4306.364 kb on + strand at 4306.365 kb on - strand at 4306.365 kb on - strand at 4306.370 kb on + strand at 4306.371 kb on - strand at 4306.432 kb on + strand at 4306.439 kb on + strand at 4306.445 kb on + strand at 4306.445 kb on + strand at 4306.451 kb on + strand at 4306.484 kb on + strand at 4306.501 kb on - strand at 4306.666 kb on + strand, within CA264_18510 at 4306.666 kb on + strand, within CA264_18510 at 4306.667 kb on - strand, within CA264_18510 at 4306.667 kb on - strand, within CA264_18510 at 4306.667 kb on - strand, within CA264_18510 at 4306.667 kb on - strand, within CA264_18510 at 4306.669 kb on - strand, within CA264_18510 at 4306.699 kb on - strand, within CA264_18510 at 4306.699 kb on - strand, within CA264_18510 at 4306.699 kb on - strand, within CA264_18510 at 4306.741 kb on + strand, within CA264_18510 at 4306.754 kb on - strand, within CA264_18510 at 4306.859 kb on + strand, within CA264_18510 at 4306.860 kb on - strand, within CA264_18510 at 4306.860 kb on - strand, within CA264_18510 at 4306.860 kb on - strand, within CA264_18510 at 4306.863 kb on + strand, within CA264_18510 at 4306.864 kb on - strand, within CA264_18510 at 4306.864 kb on - strand, within CA264_18510 at 4306.880 kb on + strand, within CA264_18510 at 4306.881 kb on - strand, within CA264_18510 at 4306.896 kb on + strand, within CA264_18510 at 4306.896 kb on + strand, within CA264_18510 at 4306.897 kb on - strand, within CA264_18510 at 4306.897 kb on - strand, within CA264_18510 at 4306.982 kb on - strand, within CA264_18510 at 4307.006 kb on + strand, within CA264_18510 at 4307.054 kb on + strand, within CA264_18510 at 4307.174 kb on + strand at 4307.190 kb on + strand at 4307.191 kb on - strand at 4307.219 kb on + strand at 4307.220 kb on - strand at 4307.220 kb on - strand at 4307.221 kb on + strand at 4307.222 kb on - strand at 4307.222 kb on - strand at 4307.222 kb on - strand at 4307.226 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 4,305,157 + +0.9 4,305,157 + -0.4 4,305,174 - -0.6 4,305,177 + -0.1 4,305,178 - -0.5 4,305,222 + -1.2 4,305,278 + -2.0 4,305,278 + -1.4 4,305,419 - -0.4 4,305,419 - -0.2 4,305,429 - -1.1 4,305,485 - CA264_18505 0.10 -0.3 4,305,485 - CA264_18505 0.10 +0.1 4,305,543 + CA264_18505 0.17 -1.0 4,305,575 - CA264_18505 0.21 -0.0 4,305,575 - CA264_18505 0.21 +0.1 4,305,629 + CA264_18505 0.27 -0.4 4,305,629 + CA264_18505 0.27 +0.2 4,305,713 - CA264_18505 0.37 -1.0 4,305,718 + CA264_18505 0.38 -0.7 4,305,829 + CA264_18505 0.51 -1.1 4,305,904 + CA264_18505 0.59 -1.5 4,306,027 + CA264_18505 0.74 -0.7 4,306,027 + CA264_18505 0.74 -1.5 4,306,028 - CA264_18505 0.74 -2.3 4,306,028 - CA264_18505 0.74 -1.5 4,306,063 + CA264_18505 0.78 -1.7 4,306,064 - CA264_18505 0.78 -0.9 4,306,064 - CA264_18505 0.78 -0.0 4,306,064 - CA264_18505 0.78 -0.3 4,306,238 + -0.3 4,306,239 - -1.0 4,306,244 + -1.4 4,306,248 - +0.2 4,306,364 + -0.5 4,306,365 - -1.2 4,306,365 - -0.5 4,306,370 + -0.0 4,306,371 - -0.5 4,306,432 + -0.9 4,306,439 + -1.0 4,306,445 + -1.9 4,306,445 + -0.5 4,306,451 + +0.1 4,306,484 + -1.6 4,306,501 - +0.0 4,306,666 + CA264_18510 0.29 +0.6 4,306,666 + CA264_18510 0.29 -0.7 4,306,667 - CA264_18510 0.30 -0.2 4,306,667 - CA264_18510 0.30 -0.4 4,306,667 - CA264_18510 0.30 -0.5 4,306,667 - CA264_18510 0.30 -0.4 4,306,669 - CA264_18510 0.30 -0.4 4,306,699 - CA264_18510 0.34 +0.4 4,306,699 - CA264_18510 0.34 -0.7 4,306,699 - CA264_18510 0.34 -0.7 4,306,741 + CA264_18510 0.39 -0.3 4,306,754 - CA264_18510 0.41 -0.2 4,306,859 + CA264_18510 0.55 -0.3 4,306,860 - CA264_18510 0.55 +0.6 4,306,860 - CA264_18510 0.55 +0.4 4,306,860 - CA264_18510 0.55 -0.4 4,306,863 + CA264_18510 0.56 -1.3 4,306,864 - CA264_18510 0.56 -2.5 4,306,864 - CA264_18510 0.56 -0.3 4,306,880 + CA264_18510 0.58 -0.8 4,306,881 - CA264_18510 0.58 +0.9 4,306,896 + CA264_18510 0.60 -0.8 4,306,896 + CA264_18510 0.60 +0.0 4,306,897 - CA264_18510 0.60 +0.8 4,306,897 - CA264_18510 0.60 +0.2 4,306,982 - CA264_18510 0.72 -0.3 4,307,006 + CA264_18510 0.75 -1.0 4,307,054 + CA264_18510 0.81 -0.7 4,307,174 + -0.7 4,307,190 + +1.1 4,307,191 - +1.1 4,307,219 + +0.7 4,307,220 - -0.0 4,307,220 - +1.1 4,307,221 + +0.6 4,307,222 - -0.1 4,307,222 - +0.7 4,307,222 - -0.7 4,307,226 - +0.7
Or see this region's nucleotide sequence