Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18245 and CA264_18250 are separated by 47 nucleotides CA264_18250 and CA264_18255 are separated by 56 nucleotides
CA264_18245: CA264_18245 - NADH-quinone oxidoreductase subunit A, at 4,243,005 to 4,243,514
_18245
CA264_18250: CA264_18250 - NADH-quinone oxidoreductase subunit B, at 4,243,562 to 4,244,104
_18250
CA264_18255: CA264_18255 - hypothetical protein, at 4,244,161 to 4,247,547
_18255
Position (kb)
4243
4244
4245 Strain fitness (log2 ratio)
-1
0
1 at 4242.579 kb on + strand at 4242.598 kb on + strand at 4242.598 kb on + strand at 4242.599 kb on - strand at 4242.658 kb on - strand at 4242.658 kb on - strand at 4242.672 kb on + strand at 4242.695 kb on - strand at 4242.751 kb on + strand at 4242.752 kb on - strand at 4242.754 kb on - strand at 4242.754 kb on - strand at 4242.863 kb on - strand at 4242.865 kb on + strand at 4242.907 kb on + strand at 4242.928 kb on + strand at 4242.962 kb on - strand at 4243.002 kb on - strand at 4243.037 kb on + strand at 4243.334 kb on + strand, within CA264_18245 at 4243.452 kb on + strand, within CA264_18245 at 4243.512 kb on + strand at 4243.591 kb on - strand at 4243.616 kb on - strand at 4243.672 kb on + strand, within CA264_18250 at 4244.115 kb on + strand at 4244.122 kb on + strand at 4244.225 kb on + strand at 4244.226 kb on - strand at 4244.227 kb on + strand at 4244.232 kb on + strand at 4244.309 kb on + strand at 4244.461 kb on - strand at 4244.540 kb on - strand, within CA264_18255 at 4244.544 kb on - strand, within CA264_18255 at 4244.550 kb on + strand, within CA264_18255 at 4244.551 kb on - strand, within CA264_18255 at 4244.551 kb on - strand, within CA264_18255 at 4244.597 kb on + strand, within CA264_18255 at 4244.599 kb on + strand, within CA264_18255 at 4244.599 kb on + strand, within CA264_18255 at 4244.600 kb on - strand, within CA264_18255 at 4244.600 kb on - strand, within CA264_18255 at 4244.623 kb on + strand, within CA264_18255 at 4244.624 kb on - strand, within CA264_18255 at 4244.649 kb on + strand, within CA264_18255 at 4244.649 kb on + strand, within CA264_18255 at 4244.833 kb on + strand, within CA264_18255 at 4244.833 kb on + strand, within CA264_18255 at 4244.923 kb on - strand, within CA264_18255 at 4245.007 kb on + strand, within CA264_18255 at 4245.008 kb on - strand, within CA264_18255 at 4245.008 kb on - strand, within CA264_18255 at 4245.093 kb on + strand, within CA264_18255
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 4,242,579 + -0.0 4,242,598 + -0.3 4,242,598 + +0.7 4,242,599 - +0.5 4,242,658 - -0.7 4,242,658 - -0.9 4,242,672 + -0.1 4,242,695 - +0.1 4,242,751 + -0.0 4,242,752 - +0.1 4,242,754 - -0.3 4,242,754 - +0.3 4,242,863 - -0.1 4,242,865 + +1.3 4,242,907 + +0.1 4,242,928 + +0.2 4,242,962 - +0.0 4,243,002 - +0.2 4,243,037 + +0.3 4,243,334 + CA264_18245 0.65 -0.4 4,243,452 + CA264_18245 0.88 -1.0 4,243,512 + -1.0 4,243,591 - -0.9 4,243,616 - +0.3 4,243,672 + CA264_18250 0.20 -0.8 4,244,115 + -0.1 4,244,122 + -1.4 4,244,225 + +0.1 4,244,226 - -0.4 4,244,227 + +0.0 4,244,232 + -0.4 4,244,309 + +0.4 4,244,461 - +0.1 4,244,540 - CA264_18255 0.11 -0.1 4,244,544 - CA264_18255 0.11 -0.4 4,244,550 + CA264_18255 0.11 +0.1 4,244,551 - CA264_18255 0.12 -1.0 4,244,551 - CA264_18255 0.12 +0.6 4,244,597 + CA264_18255 0.13 +0.4 4,244,599 + CA264_18255 0.13 -1.7 4,244,599 + CA264_18255 0.13 -1.2 4,244,600 - CA264_18255 0.13 -0.3 4,244,600 - CA264_18255 0.13 -0.4 4,244,623 + CA264_18255 0.14 -0.8 4,244,624 - CA264_18255 0.14 -0.0 4,244,649 + CA264_18255 0.14 +0.2 4,244,649 + CA264_18255 0.14 -1.1 4,244,833 + CA264_18255 0.20 +1.0 4,244,833 + CA264_18255 0.20 +0.1 4,244,923 - CA264_18255 0.22 +0.1 4,245,007 + CA264_18255 0.25 -0.4 4,245,008 - CA264_18255 0.25 +0.3 4,245,008 - CA264_18255 0.25 -0.2 4,245,093 + CA264_18255 0.28 -0.3
Or see this region's nucleotide sequence