Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17790 and CA264_17795 overlap by 1 nucleotides CA264_17795 and CA264_17800 are separated by 185 nucleotides CA264_17800 and CA264_17805 are separated by 137 nucleotides CA264_17805 and CA264_17810 are separated by 210 nucleotides
CA264_17790: CA264_17790 - hypothetical protein, at 4,137,128 to 4,138,066
_17790
CA264_17795: CA264_17795 - dephospho-CoA kinase, at 4,138,066 to 4,138,662
_17795
CA264_17800: CA264_17800 - tRNA-Val, at 4,138,848 to 4,138,922
_17800
CA264_17805: CA264_17805 - tRNA-Val, at 4,139,060 to 4,139,137
_17805
CA264_17810: CA264_17810 - hypothetical protein, at 4,139,348 to 4,141,834
_17810
Position (kb)
4138
4139 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4137.935 kb on - strand, within CA264_17790 at 4137.960 kb on - strand, within CA264_17790 at 4137.960 kb on - strand, within CA264_17790 at 4138.023 kb on + strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.066 kb on - strand at 4138.077 kb on - strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.741 kb on - strand at 4138.760 kb on + strand at 4138.760 kb on + strand at 4138.762 kb on + strand at 4138.762 kb on + strand at 4138.763 kb on - strand at 4138.763 kb on - strand at 4138.886 kb on + strand, within CA264_17800 at 4138.887 kb on - strand, within CA264_17800 at 4138.915 kb on - strand at 4138.915 kb on - strand at 4139.025 kb on - strand at 4139.254 kb on + strand at 4139.268 kb on + strand at 4139.268 kb on + strand at 4139.279 kb on + strand at 4139.294 kb on + strand at 4139.304 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.409 kb on - strand at 4139.427 kb on + strand at 4139.509 kb on + strand at 4139.510 kb on - strand at 4139.608 kb on + strand, within CA264_17810 at 4139.609 kb on - strand, within CA264_17810 at 4139.649 kb on + strand, within CA264_17810 at 4139.650 kb on - strand, within CA264_17810 at 4139.650 kb on - strand, within CA264_17810 at 4139.660 kb on + strand, within CA264_17810 at 4139.682 kb on - strand, within CA264_17810
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 4,137,935 - CA264_17790 0.86 -0.1 4,137,960 - CA264_17790 0.89 -0.5 4,137,960 - CA264_17790 0.89 +0.7 4,138,023 + +0.8 4,138,024 - -0.6 4,138,024 - -0.4 4,138,024 - +0.3 4,138,024 - -0.4 4,138,066 - -1.2 4,138,077 - -0.8 4,138,732 + -0.1 4,138,732 + +0.6 4,138,732 + -0.2 4,138,732 + -0.2 4,138,741 - -0.3 4,138,760 + -0.6 4,138,760 + +0.9 4,138,762 + +0.4 4,138,762 + -0.3 4,138,763 - +1.2 4,138,763 - +1.3 4,138,886 + CA264_17800 0.51 -0.0 4,138,887 - CA264_17800 0.52 -0.2 4,138,915 - +2.8 4,138,915 - -0.3 4,139,025 - +0.4 4,139,254 + +1.3 4,139,268 + +0.9 4,139,268 + -0.3 4,139,279 + -0.2 4,139,294 + -2.4 4,139,304 + +0.1 4,139,408 + +0.1 4,139,408 + +0.6 4,139,408 + -0.6 4,139,408 + +1.5 4,139,408 + -0.9 4,139,408 + -1.1 4,139,408 + -0.7 4,139,408 + -0.7 4,139,409 - -1.3 4,139,427 + +0.0 4,139,509 + -0.4 4,139,510 - -0.2 4,139,608 + CA264_17810 0.10 +1.6 4,139,609 - CA264_17810 0.10 +0.3 4,139,649 + CA264_17810 0.12 +0.2 4,139,650 - CA264_17810 0.12 -0.3 4,139,650 - CA264_17810 0.12 +0.5 4,139,660 + CA264_17810 0.13 +0.8 4,139,682 - CA264_17810 0.13 +0.1
Or see this region's nucleotide sequence