Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17500 and CA264_17505 are separated by 12 nucleotides CA264_17505 and CA264_17510 are separated by 99 nucleotides CA264_17510 and CA264_17515 are separated by 4 nucleotides CA264_17515 and CA264_17520 overlap by 8 nucleotides
CA264_17500: CA264_17500 - molecular chaperone DnaK, at 4,077,216 to 4,077,605
_17500
CA264_17505: CA264_17505 - SMC-Scp complex subunit ScpB, at 4,077,618 to 4,078,181
_17505
CA264_17510: CA264_17510 - pseudouridylate synthase, at 4,078,281 to 4,079,909
_17510
CA264_17515: CA264_17515 - type III pantothenate kinase, at 4,079,914 to 4,080,633
_17515
CA264_17520: CA264_17520 - hypothetical protein, at 4,080,626 to 4,081,921
_17520
Position (kb)
4078
4079
4080 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4077.314 kb on - strand, within CA264_17500 at 4077.502 kb on - strand, within CA264_17500 at 4077.517 kb on + strand, within CA264_17500 at 4077.596 kb on + strand at 4077.860 kb on - strand, within CA264_17505 at 4077.860 kb on - strand, within CA264_17505 at 4077.926 kb on + strand, within CA264_17505 at 4078.031 kb on - strand, within CA264_17505 at 4078.208 kb on - strand at 4078.209 kb on + strand at 4078.210 kb on - strand at 4078.230 kb on + strand at 4078.231 kb on - strand at 4078.272 kb on + strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.273 kb on - strand at 4078.276 kb on + strand at 4078.276 kb on + strand at 4078.277 kb on - strand at 4078.277 kb on - strand at 4078.277 kb on - strand at 4078.472 kb on + strand, within CA264_17510 at 4078.473 kb on - strand, within CA264_17510 at 4078.482 kb on - strand, within CA264_17510 at 4078.942 kb on - strand, within CA264_17510 at 4079.349 kb on + strand, within CA264_17510 at 4079.350 kb on - strand, within CA264_17510 at 4079.350 kb on - strand, within CA264_17510 at 4079.480 kb on + strand, within CA264_17510 at 4079.588 kb on + strand, within CA264_17510 at 4079.589 kb on - strand, within CA264_17510 at 4079.609 kb on - strand, within CA264_17510 at 4079.641 kb on - strand, within CA264_17510 at 4079.645 kb on + strand, within CA264_17510 at 4079.899 kb on - strand at 4079.899 kb on - strand at 4080.624 kb on + strand at 4080.624 kb on + strand at 4080.624 kb on + strand at 4080.624 kb on + strand at 4080.624 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 4,077,314 - CA264_17500 0.25 -1.4 4,077,502 - CA264_17500 0.73 -0.1 4,077,517 + CA264_17500 0.77 +0.3 4,077,596 + +0.5 4,077,860 - CA264_17505 0.43 -1.2 4,077,860 - CA264_17505 0.43 -2.0 4,077,926 + CA264_17505 0.55 -0.9 4,078,031 - CA264_17505 0.73 +1.2 4,078,208 - +0.6 4,078,209 + -2.3 4,078,210 - -0.0 4,078,230 + -0.7 4,078,231 - -0.4 4,078,272 + -1.9 4,078,273 - +0.1 4,078,273 - +0.2 4,078,273 - +0.0 4,078,273 - +0.4 4,078,273 - -0.0 4,078,276 + +0.0 4,078,276 + +0.4 4,078,277 - +0.2 4,078,277 - +0.5 4,078,277 - -0.0 4,078,472 + CA264_17510 0.12 -0.7 4,078,473 - CA264_17510 0.12 -1.1 4,078,482 - CA264_17510 0.12 -1.1 4,078,942 - CA264_17510 0.41 -0.8 4,079,349 + CA264_17510 0.66 -0.6 4,079,350 - CA264_17510 0.66 -1.0 4,079,350 - CA264_17510 0.66 +1.8 4,079,480 + CA264_17510 0.74 -0.3 4,079,588 + CA264_17510 0.80 -0.7 4,079,589 - CA264_17510 0.80 -0.8 4,079,609 - CA264_17510 0.82 -1.1 4,079,641 - CA264_17510 0.83 +0.6 4,079,645 + CA264_17510 0.84 -0.7 4,079,899 - -0.4 4,079,899 - -0.4 4,080,624 + -2.4 4,080,624 + -1.8 4,080,624 + -2.0 4,080,624 + -2.1 4,080,624 + -1.7
Or see this region's nucleotide sequence