Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15895 and CA264_15900 are separated by 105 nucleotides CA264_15900 and CA264_15905 are separated by 118 nucleotides CA264_15905 and CA264_15910 are separated by 21 nucleotides
CA264_15895: CA264_15895 - hypothetical protein, at 3,709,378 to 3,710,541
_15895
CA264_15900: CA264_15900 - SAM-dependent methyltransferase, at 3,710,647 to 3,711,330
_15900
CA264_15905: CA264_15905 - esterase, at 3,711,449 to 3,711,877
_15905
CA264_15910: CA264_15910 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 3,711,899 to 3,712,972
_15910
Position (kb)
3711
3712 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3710.449 kb on - strand at 3710.452 kb on + strand at 3710.453 kb on - strand at 3710.473 kb on - strand at 3710.586 kb on + strand at 3710.587 kb on - strand at 3710.589 kb on + strand at 3710.589 kb on + strand at 3710.589 kb on + strand at 3710.590 kb on - strand at 3710.590 kb on - strand at 3710.590 kb on - strand at 3710.590 kb on - strand at 3710.592 kb on - strand at 3710.592 kb on - strand at 3710.594 kb on - strand at 3710.594 kb on - strand at 3710.594 kb on - strand at 3710.602 kb on - strand at 3710.605 kb on + strand at 3710.605 kb on + strand at 3710.606 kb on - strand at 3710.606 kb on - strand at 3710.607 kb on + strand at 3710.608 kb on - strand at 3710.616 kb on - strand at 3710.616 kb on - strand at 3710.768 kb on + strand, within CA264_15900 at 3710.768 kb on + strand, within CA264_15900 at 3710.769 kb on - strand, within CA264_15900 at 3710.769 kb on - strand, within CA264_15900 at 3710.769 kb on - strand, within CA264_15900 at 3710.804 kb on + strand, within CA264_15900 at 3710.805 kb on - strand, within CA264_15900 at 3710.870 kb on + strand, within CA264_15900 at 3710.882 kb on + strand, within CA264_15900 at 3710.882 kb on + strand, within CA264_15900 at 3710.885 kb on + strand, within CA264_15900 at 3710.923 kb on + strand, within CA264_15900 at 3710.923 kb on + strand, within CA264_15900 at 3710.924 kb on - strand, within CA264_15900 at 3710.924 kb on - strand, within CA264_15900 at 3710.949 kb on + strand, within CA264_15900 at 3710.990 kb on + strand, within CA264_15900 at 3710.991 kb on - strand, within CA264_15900 at 3711.033 kb on - strand, within CA264_15900 at 3711.082 kb on - strand, within CA264_15900 at 3711.086 kb on + strand, within CA264_15900 at 3711.086 kb on + strand, within CA264_15900 at 3711.087 kb on - strand, within CA264_15900 at 3711.127 kb on - strand, within CA264_15900 at 3711.130 kb on + strand, within CA264_15900 at 3711.285 kb on - strand at 3711.285 kb on - strand at 3711.285 kb on - strand at 3711.317 kb on - strand at 3711.382 kb on + strand at 3711.382 kb on + strand at 3711.384 kb on + strand at 3711.384 kb on + strand at 3711.384 kb on + strand at 3711.386 kb on + strand at 3711.387 kb on - strand at 3711.387 kb on - strand at 3711.393 kb on + strand at 3711.393 kb on + strand at 3711.409 kb on - strand at 3711.460 kb on - strand at 3711.460 kb on - strand at 3711.460 kb on - strand at 3711.465 kb on + strand at 3711.662 kb on + strand, within CA264_15905 at 3711.680 kb on + strand, within CA264_15905 at 3711.681 kb on - strand, within CA264_15905 at 3711.721 kb on + strand, within CA264_15905 at 3711.721 kb on + strand, within CA264_15905 at 3711.728 kb on + strand, within CA264_15905 at 3711.746 kb on + strand, within CA264_15905 at 3711.808 kb on + strand, within CA264_15905 at 3711.829 kb on - strand, within CA264_15905 at 3711.918 kb on + strand at 3711.918 kb on + strand at 3711.923 kb on - strand at 3711.931 kb on + strand at 3712.054 kb on + strand, within CA264_15910 at 3712.112 kb on - strand, within CA264_15910 at 3712.274 kb on - strand, within CA264_15910 at 3712.293 kb on - strand, within CA264_15910 at 3712.329 kb on + strand, within CA264_15910 at 3712.332 kb on - strand, within CA264_15910 at 3712.400 kb on + strand, within CA264_15910 at 3712.401 kb on - strand, within CA264_15910 at 3712.534 kb on + strand, within CA264_15910 at 3712.534 kb on + strand, within CA264_15910 at 3712.671 kb on - strand, within CA264_15910 at 3712.696 kb on + strand, within CA264_15910 at 3712.701 kb on - strand, within CA264_15910 at 3712.701 kb on - strand, within CA264_15910 at 3712.706 kb on + strand, within CA264_15910 at 3712.706 kb on + strand, within CA264_15910 at 3712.706 kb on + strand, within CA264_15910 at 3712.707 kb on - strand, within CA264_15910 at 3712.720 kb on + strand, within CA264_15910 at 3712.804 kb on + strand, within CA264_15910 at 3712.804 kb on + strand, within CA264_15910 at 3712.861 kb on + strand, within CA264_15910 at 3712.865 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 3,710,449 - +2.0 3,710,452 + -0.3 3,710,453 - +1.9 3,710,473 - -0.3 3,710,586 + +0.0 3,710,587 - +0.2 3,710,589 + +0.1 3,710,589 + +1.1 3,710,589 + +1.3 3,710,590 - -1.5 3,710,590 - -0.2 3,710,590 - -0.5 3,710,590 - +0.5 3,710,592 - -0.3 3,710,592 - -0.3 3,710,594 - -0.3 3,710,594 - +1.4 3,710,594 - +1.7 3,710,602 - +0.0 3,710,605 + +0.7 3,710,605 + -1.3 3,710,606 - +0.8 3,710,606 - +0.4 3,710,607 + -0.2 3,710,608 - -0.2 3,710,616 - -0.9 3,710,616 - -0.4 3,710,768 + CA264_15900 0.18 -0.2 3,710,768 + CA264_15900 0.18 -1.0 3,710,769 - CA264_15900 0.18 +0.5 3,710,769 - CA264_15900 0.18 +0.4 3,710,769 - CA264_15900 0.18 +1.1 3,710,804 + CA264_15900 0.23 -0.9 3,710,805 - CA264_15900 0.23 -0.1 3,710,870 + CA264_15900 0.33 -0.6 3,710,882 + CA264_15900 0.34 -0.4 3,710,882 + CA264_15900 0.34 -0.7 3,710,885 + CA264_15900 0.35 -0.2 3,710,923 + CA264_15900 0.40 -0.3 3,710,923 + CA264_15900 0.40 +0.9 3,710,924 - CA264_15900 0.40 -0.4 3,710,924 - CA264_15900 0.40 -0.6 3,710,949 + CA264_15900 0.44 +0.5 3,710,990 + CA264_15900 0.50 -1.0 3,710,991 - CA264_15900 0.50 +0.7 3,711,033 - CA264_15900 0.56 -0.6 3,711,082 - CA264_15900 0.64 -0.7 3,711,086 + CA264_15900 0.64 -0.7 3,711,086 + CA264_15900 0.64 +0.1 3,711,087 - CA264_15900 0.64 +0.1 3,711,127 - CA264_15900 0.70 +0.9 3,711,130 + CA264_15900 0.71 +0.9 3,711,285 - +0.5 3,711,285 - -0.3 3,711,285 - +0.4 3,711,317 - -1.8 3,711,382 + +0.6 3,711,382 + -0.3 3,711,384 + +0.3 3,711,384 + -0.7 3,711,384 + +0.0 3,711,386 + -0.4 3,711,387 - -0.8 3,711,387 - -0.4 3,711,393 + -1.0 3,711,393 + -0.8 3,711,409 - -0.2 3,711,460 - -0.3 3,711,460 - -0.8 3,711,460 - -0.5 3,711,465 + +0.4 3,711,662 + CA264_15905 0.50 -0.1 3,711,680 + CA264_15905 0.54 -2.4 3,711,681 - CA264_15905 0.54 -2.2 3,711,721 + CA264_15905 0.63 -0.4 3,711,721 + CA264_15905 0.63 -0.3 3,711,728 + CA264_15905 0.65 -0.8 3,711,746 + CA264_15905 0.69 -0.8 3,711,808 + CA264_15905 0.84 -0.2 3,711,829 - CA264_15905 0.89 -0.7 3,711,918 + +0.1 3,711,918 + +1.5 3,711,923 - -1.1 3,711,931 + -0.4 3,712,054 + CA264_15910 0.14 -1.6 3,712,112 - CA264_15910 0.20 -0.5 3,712,274 - CA264_15910 0.35 -0.4 3,712,293 - CA264_15910 0.37 -1.1 3,712,329 + CA264_15910 0.40 -0.0 3,712,332 - CA264_15910 0.40 -2.9 3,712,400 + CA264_15910 0.47 -0.8 3,712,401 - CA264_15910 0.47 -1.6 3,712,534 + CA264_15910 0.59 -0.7 3,712,534 + CA264_15910 0.59 -0.2 3,712,671 - CA264_15910 0.72 -0.3 3,712,696 + CA264_15910 0.74 -0.4 3,712,701 - CA264_15910 0.75 -0.3 3,712,701 - CA264_15910 0.75 -0.6 3,712,706 + CA264_15910 0.75 +0.0 3,712,706 + CA264_15910 0.75 -0.7 3,712,706 + CA264_15910 0.75 +0.4 3,712,707 - CA264_15910 0.75 -0.8 3,712,720 + CA264_15910 0.76 -0.3 3,712,804 + CA264_15910 0.84 -0.7 3,712,804 + CA264_15910 0.84 +0.8 3,712,861 + CA264_15910 0.90 +0.0 3,712,865 + -0.4
Or see this region's nucleotide sequence