Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15655 and CA264_15660 are separated by 134 nucleotides CA264_15660 and CA264_15665 are separated by 320 nucleotides CA264_15665 and CA264_15670 are separated by 2 nucleotides CA264_15670 and CA264_15675 are separated by 114 nucleotides
CA264_15655: CA264_15655 - hypothetical protein, at 3,658,301 to 3,658,504
_15655
CA264_15660: CA264_15660 - 50S ribosomal protein L28, at 3,658,639 to 3,658,878
_15660
CA264_15665: CA264_15665 - 50S ribosomal protein L33, at 3,659,199 to 3,659,387
_15665
CA264_15670: CA264_15670 - DUF4295 domain-containing protein, at 3,659,390 to 3,659,542
_15670
CA264_15675: CA264_15675 - signal recognition particle-docking protein FtsY, at 3,659,657 to 3,660,616
_15675
Position (kb)
3659
3660 Strain fitness (log2 ratio)
-1
0
1 at 3658.853 kb on + strand, within CA264_15660 at 3658.864 kb on + strand at 3658.864 kb on + strand at 3658.864 kb on + strand at 3658.876 kb on + strand at 3658.877 kb on - strand at 3658.966 kb on + strand at 3658.998 kb on + strand at 3659.088 kb on + strand at 3659.092 kb on + strand at 3659.119 kb on - strand at 3659.119 kb on - strand at 3659.520 kb on + strand, within CA264_15670 at 3659.520 kb on + strand, within CA264_15670 at 3659.533 kb on + strand at 3659.533 kb on + strand at 3659.543 kb on + strand at 3659.573 kb on + strand at 3659.573 kb on + strand at 3659.641 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 3,658,853 + CA264_15660 0.89 +0.1 3,658,864 + -1.1 3,658,864 + -0.1 3,658,864 + +0.7 3,658,876 + -0.9 3,658,877 - +1.2 3,658,966 + -0.6 3,658,998 + +0.9 3,659,088 + +0.1 3,659,092 + -0.1 3,659,119 - -0.8 3,659,119 - -0.3 3,659,520 + CA264_15670 0.85 -0.6 3,659,520 + CA264_15670 0.85 -1.1 3,659,533 + +0.6 3,659,533 + -0.1 3,659,543 + +0.1 3,659,573 + +0.0 3,659,573 + -0.3 3,659,641 + -0.1
Or see this region's nucleotide sequence