Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15065 and CA264_15070 are separated by 107 nucleotides CA264_15070 and CA264_15075 are separated by 72 nucleotides
CA264_15065: CA264_15065 - formiminoglutamase, at 3,538,033 to 3,539,199
_15065
CA264_15070: CA264_15070 - cytochrome b5, at 3,539,307 to 3,539,567
_15070
CA264_15075: CA264_15075 - hypothetical protein, at 3,539,640 to 3,540,506
_15075
Position (kb)
3539
3540 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3538.342 kb on + strand, within CA264_15065 at 3538.427 kb on - strand, within CA264_15065 at 3538.724 kb on + strand, within CA264_15065 at 3538.865 kb on - strand, within CA264_15065 at 3538.871 kb on - strand, within CA264_15065 at 3539.284 kb on + strand at 3539.285 kb on - strand at 3539.302 kb on - strand at 3539.302 kb on - strand at 3539.382 kb on + strand, within CA264_15070 at 3539.397 kb on + strand, within CA264_15070 at 3539.398 kb on - strand, within CA264_15070 at 3539.398 kb on - strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.477 kb on - strand, within CA264_15070 at 3539.565 kb on + strand at 3539.566 kb on - strand at 3539.589 kb on + strand at 3539.590 kb on - strand at 3539.590 kb on - strand at 3539.601 kb on - strand at 3539.618 kb on + strand at 3539.628 kb on + strand at 3539.628 kb on + strand at 3539.632 kb on + strand at 3539.632 kb on + strand at 3539.632 kb on + strand at 3539.633 kb on - strand at 3539.634 kb on + strand at 3539.634 kb on + strand at 3539.635 kb on - strand at 3539.635 kb on - strand at 3539.648 kb on - strand at 3540.481 kb on + strand at 3540.500 kb on + strand at 3540.500 kb on + strand at 3540.501 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 3,538,342 + CA264_15065 0.26 -1.1 3,538,427 - CA264_15065 0.34 -1.2 3,538,724 + CA264_15065 0.59 -1.1 3,538,865 - CA264_15065 0.71 -0.2 3,538,871 - CA264_15065 0.72 -1.9 3,539,284 + +2.1 3,539,285 - -0.6 3,539,302 - -0.5 3,539,302 - +0.5 3,539,382 + CA264_15070 0.29 -0.2 3,539,397 + CA264_15070 0.34 -1.3 3,539,398 - CA264_15070 0.35 -1.3 3,539,398 - CA264_15070 0.35 +1.0 3,539,404 + CA264_15070 0.37 -0.9 3,539,404 + CA264_15070 0.37 -0.6 3,539,404 + CA264_15070 0.37 +0.5 3,539,404 + CA264_15070 0.37 -1.0 3,539,405 - CA264_15070 0.38 -0.2 3,539,405 - CA264_15070 0.38 +0.3 3,539,405 - CA264_15070 0.38 -0.3 3,539,477 - CA264_15070 0.65 -1.1 3,539,565 + -0.1 3,539,566 - -1.2 3,539,589 + -0.3 3,539,590 - -0.4 3,539,590 - -1.0 3,539,601 - -0.8 3,539,618 + -0.5 3,539,628 + -0.2 3,539,628 + -0.6 3,539,632 + -0.6 3,539,632 + +0.0 3,539,632 + -0.1 3,539,633 - -0.3 3,539,634 + -0.7 3,539,634 + -1.9 3,539,635 - +0.9 3,539,635 - +0.6 3,539,648 - +0.3 3,540,481 + +0.4 3,540,500 + +0.9 3,540,500 + -1.0 3,540,501 - -0.4
Or see this region's nucleotide sequence