Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14445 and CA264_14450 are separated by 106 nucleotides CA264_14450 and CA264_14455 are separated by 372 nucleotides CA264_14455 and CA264_14460 are separated by 7 nucleotides
CA264_14445: CA264_14445 - cysteine--tRNA ligase, at 3,388,566 to 3,390,062
_14445
CA264_14450: CA264_14450 - endonuclease/exonuclease/phosphatase, at 3,390,169 to 3,391,302
_14450
CA264_14455: CA264_14455 - ribosome maturation factor, at 3,391,675 to 3,392,121
_14455
CA264_14460: CA264_14460 - transcription termination/antitermination protein NusA, at 3,392,129 to 3,393,382
_14460
Position (kb)
3390
3391
3392 Strain fitness (log2 ratio)
-2
-1
0
1 at 3390.067 kb on + strand at 3390.067 kb on + strand at 3390.067 kb on + strand at 3390.074 kb on + strand at 3390.075 kb on - strand at 3390.075 kb on - strand at 3390.103 kb on + strand at 3390.239 kb on + strand at 3390.320 kb on + strand, within CA264_14450 at 3390.390 kb on + strand, within CA264_14450 at 3390.391 kb on - strand, within CA264_14450 at 3390.391 kb on - strand, within CA264_14450 at 3390.537 kb on + strand, within CA264_14450 at 3390.593 kb on - strand, within CA264_14450 at 3390.621 kb on - strand, within CA264_14450 at 3390.728 kb on + strand, within CA264_14450 at 3390.836 kb on + strand, within CA264_14450 at 3391.056 kb on - strand, within CA264_14450 at 3391.294 kb on - strand at 3391.321 kb on + strand at 3391.400 kb on + strand at 3391.400 kb on + strand at 3391.401 kb on - strand at 3391.401 kb on - strand at 3391.402 kb on + strand at 3391.403 kb on - strand at 3391.423 kb on + strand at 3391.423 kb on + strand at 3391.425 kb on + strand at 3391.429 kb on - strand at 3391.504 kb on + strand at 3391.505 kb on - strand at 3391.559 kb on + strand at 3391.627 kb on - strand at 3391.627 kb on - strand at 3391.633 kb on + strand at 3391.644 kb on + strand at 3391.710 kb on + strand at 3391.711 kb on - strand at 3391.711 kb on - strand at 3391.712 kb on + strand at 3391.712 kb on + strand at 3391.862 kb on - strand, within CA264_14455 at 3391.862 kb on - strand, within CA264_14455 at 3391.920 kb on + strand, within CA264_14455 at 3392.056 kb on + strand, within CA264_14455 at 3392.056 kb on + strand, within CA264_14455 at 3392.056 kb on + strand, within CA264_14455 at 3392.057 kb on - strand, within CA264_14455
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 3,390,067 + -0.2 3,390,067 + -1.5 3,390,067 + -0.8 3,390,074 + -1.2 3,390,075 - -0.9 3,390,075 - -1.4 3,390,103 + +1.0 3,390,239 + -1.8 3,390,320 + CA264_14450 0.13 +0.5 3,390,390 + CA264_14450 0.19 -1.2 3,390,391 - CA264_14450 0.20 -0.2 3,390,391 - CA264_14450 0.20 -1.0 3,390,537 + CA264_14450 0.32 -2.1 3,390,593 - CA264_14450 0.37 -1.8 3,390,621 - CA264_14450 0.40 +0.0 3,390,728 + CA264_14450 0.49 -0.1 3,390,836 + CA264_14450 0.59 -0.9 3,391,056 - CA264_14450 0.78 -0.5 3,391,294 - -2.3 3,391,321 + -0.9 3,391,400 + -1.1 3,391,400 + -0.4 3,391,401 - -0.5 3,391,401 - -1.5 3,391,402 + -0.6 3,391,403 - -0.9 3,391,423 + +0.7 3,391,423 + -0.6 3,391,425 + -1.3 3,391,429 - -0.8 3,391,504 + -0.9 3,391,505 - -1.1 3,391,559 + -0.5 3,391,627 - -0.9 3,391,627 - -0.6 3,391,633 + -0.9 3,391,644 + -1.3 3,391,710 + -0.3 3,391,711 - -1.6 3,391,711 - -0.0 3,391,712 + -0.7 3,391,712 + -0.4 3,391,862 - CA264_14455 0.42 -0.4 3,391,862 - CA264_14455 0.42 -0.6 3,391,920 + CA264_14455 0.55 -0.3 3,392,056 + CA264_14455 0.85 -0.8 3,392,056 + CA264_14455 0.85 -1.0 3,392,056 + CA264_14455 0.85 -0.9 3,392,057 - CA264_14455 0.85 -1.7
Or see this region's nucleotide sequence