Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12165 and CA264_12170 are separated by 97 nucleotides CA264_12170 and CA264_12175 overlap by 361 nucleotides CA264_12175 and CA264_12180 are separated by 123 nucleotides CA264_12180 and CA264_12185 are separated by 78 nucleotides
CA264_12165: CA264_12165 - hypothetical protein, at 2,836,423 to 2,837,733
_12165
CA264_12170: CA264_12170 - hypothetical protein, at 2,837,831 to 2,838,925
_12170
CA264_12175: CA264_12175 - hypothetical protein, at 2,838,565 to 2,839,107
_12175
CA264_12180: CA264_12180 - hypothetical protein, at 2,839,231 to 2,839,929
_12180
CA264_12185: CA264_12185 - 5'/3'-nucleotidase SurE, at 2,840,008 to 2,840,784
_12185
Position (kb)
2838
2839
2840 Strain fitness (log2 ratio)
-1
0
1
2 at 2837.614 kb on - strand at 2837.616 kb on - strand at 2837.628 kb on + strand at 2837.701 kb on + strand at 2837.732 kb on - strand at 2837.734 kb on + strand at 2837.783 kb on + strand at 2837.794 kb on + strand at 2837.794 kb on + strand at 2837.936 kb on + strand at 2837.936 kb on + strand at 2837.942 kb on + strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2837.943 kb on - strand, within CA264_12170 at 2838.414 kb on + strand, within CA264_12170 at 2838.414 kb on + strand, within CA264_12170 at 2838.436 kb on - strand, within CA264_12170 at 2838.471 kb on - strand, within CA264_12170 at 2838.472 kb on + strand, within CA264_12170 at 2838.473 kb on - strand, within CA264_12170 at 2838.954 kb on - strand, within CA264_12175 at 2839.030 kb on - strand, within CA264_12175 at 2839.032 kb on - strand, within CA264_12175 at 2839.062 kb on + strand at 2839.194 kb on + strand at 2839.196 kb on + strand at 2839.197 kb on - strand at 2839.216 kb on + strand at 2839.275 kb on - strand at 2839.330 kb on + strand, within CA264_12180 at 2839.390 kb on - strand, within CA264_12180 at 2839.454 kb on + strand, within CA264_12180 at 2839.472 kb on + strand, within CA264_12180 at 2839.473 kb on - strand, within CA264_12180 at 2839.473 kb on - strand, within CA264_12180 at 2839.527 kb on - strand, within CA264_12180 at 2839.535 kb on + strand, within CA264_12180 at 2839.536 kb on - strand, within CA264_12180 at 2839.715 kb on - strand, within CA264_12180 at 2839.736 kb on - strand, within CA264_12180 at 2839.933 kb on + strand at 2839.933 kb on + strand at 2839.934 kb on - strand at 2839.934 kb on - strand at 2839.935 kb on + strand at 2839.936 kb on - strand at 2840.010 kb on - strand at 2840.085 kb on + strand at 2840.085 kb on + strand at 2840.085 kb on + strand at 2840.088 kb on - strand, within CA264_12185
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,837,614 - +0.1 2,837,616 - -0.2 2,837,628 + -0.9 2,837,701 + +0.4 2,837,732 - -0.8 2,837,734 + +0.2 2,837,783 + -0.3 2,837,794 + +2.7 2,837,794 + -0.0 2,837,936 + -0.5 2,837,936 + +0.4 2,837,942 + CA264_12170 0.10 -1.0 2,837,943 - CA264_12170 0.10 +0.0 2,837,943 - CA264_12170 0.10 -0.8 2,837,943 - CA264_12170 0.10 +0.3 2,837,943 - CA264_12170 0.10 +0.1 2,838,414 + CA264_12170 0.53 +0.5 2,838,414 + CA264_12170 0.53 -0.9 2,838,436 - CA264_12170 0.55 -0.8 2,838,471 - CA264_12170 0.58 -0.2 2,838,472 + CA264_12170 0.59 -0.5 2,838,473 - CA264_12170 0.59 +0.2 2,838,954 - CA264_12175 0.72 -1.3 2,839,030 - CA264_12175 0.86 +0.9 2,839,032 - CA264_12175 0.86 -0.7 2,839,062 + +0.8 2,839,194 + +0.3 2,839,196 + -1.7 2,839,197 - -1.4 2,839,216 + +0.5 2,839,275 - -0.4 2,839,330 + CA264_12180 0.14 -0.0 2,839,390 - CA264_12180 0.23 +1.0 2,839,454 + CA264_12180 0.32 -0.6 2,839,472 + CA264_12180 0.34 -0.2 2,839,473 - CA264_12180 0.35 -0.1 2,839,473 - CA264_12180 0.35 -0.6 2,839,527 - CA264_12180 0.42 -1.3 2,839,535 + CA264_12180 0.43 +0.0 2,839,536 - CA264_12180 0.44 -0.1 2,839,715 - CA264_12180 0.69 +0.3 2,839,736 - CA264_12180 0.72 -0.0 2,839,933 + -0.0 2,839,933 + +0.2 2,839,934 - +0.2 2,839,934 - -0.3 2,839,935 + -0.0 2,839,936 - +0.4 2,840,010 - -0.4 2,840,085 + -0.7 2,840,085 + +0.9 2,840,085 + -1.2 2,840,088 - CA264_12185 0.10 -0.6
Or see this region's nucleotide sequence