Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11390 and CA264_11395 are separated by 449 nucleotides CA264_11395 and CA264_11400 are separated by 545 nucleotides
CA264_11390: CA264_11390 - hypothetical protein, at 2,638,830 to 2,639,228
_11390
CA264_11395: CA264_11395 - hypothetical protein, at 2,639,678 to 2,640,880
_11395
CA264_11400: CA264_11400 - alkaline phosphatase, at 2,641,426 to 2,643,105
_11400
Position (kb)
2639
2640
2641 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2638.678 kb on + strand at 2638.679 kb on - strand at 2638.700 kb on - strand at 2638.714 kb on - strand at 2638.723 kb on + strand at 2638.724 kb on - strand at 2638.758 kb on - strand at 2638.774 kb on - strand at 2638.777 kb on - strand at 2638.778 kb on + strand at 2638.778 kb on + strand at 2638.779 kb on - strand at 2638.781 kb on - strand at 2638.787 kb on + strand at 2638.787 kb on + strand at 2638.787 kb on + strand at 2638.788 kb on - strand at 2638.826 kb on + strand at 2638.826 kb on + strand at 2638.826 kb on + strand at 2638.826 kb on + strand at 2638.827 kb on - strand at 2638.827 kb on - strand at 2638.827 kb on - strand at 2638.829 kb on + strand at 2638.829 kb on + strand at 2638.830 kb on - strand at 2639.086 kb on - strand, within CA264_11390 at 2639.218 kb on + strand at 2639.219 kb on - strand at 2639.313 kb on + strand at 2639.313 kb on + strand at 2639.341 kb on + strand at 2639.342 kb on - strand at 2639.342 kb on - strand at 2639.342 kb on - strand at 2639.346 kb on - strand at 2639.372 kb on + strand at 2639.372 kb on + strand at 2639.382 kb on + strand at 2639.382 kb on + strand at 2639.383 kb on - strand at 2639.383 kb on - strand at 2639.391 kb on - strand at 2639.391 kb on - strand at 2639.391 kb on - strand at 2639.392 kb on + strand at 2639.393 kb on - strand at 2639.408 kb on + strand at 2639.417 kb on - strand at 2639.460 kb on + strand at 2639.461 kb on - strand at 2639.461 kb on - strand at 2639.466 kb on - strand at 2639.545 kb on + strand at 2639.546 kb on - strand at 2639.548 kb on + strand at 2639.548 kb on + strand at 2639.548 kb on + strand at 2639.549 kb on - strand at 2639.549 kb on - strand at 2639.606 kb on - strand at 2639.642 kb on - strand at 2639.647 kb on + strand at 2639.679 kb on + strand at 2639.680 kb on - strand at 2639.680 kb on - strand at 2639.680 kb on - strand at 2639.680 kb on - strand at 2639.726 kb on + strand at 2639.727 kb on - strand at 2639.730 kb on - strand at 2639.757 kb on + strand at 2639.761 kb on + strand at 2639.762 kb on - strand at 2639.764 kb on + strand at 2639.780 kb on + strand at 2639.781 kb on - strand at 2639.785 kb on + strand at 2639.827 kb on + strand, within CA264_11395 at 2639.829 kb on + strand, within CA264_11395 at 2639.830 kb on - strand, within CA264_11395 at 2639.890 kb on + strand, within CA264_11395 at 2639.891 kb on - strand, within CA264_11395 at 2639.985 kb on - strand, within CA264_11395 at 2640.026 kb on - strand, within CA264_11395 at 2640.093 kb on + strand, within CA264_11395 at 2640.188 kb on - strand, within CA264_11395 at 2640.188 kb on - strand, within CA264_11395 at 2640.220 kb on + strand, within CA264_11395 at 2640.222 kb on + strand, within CA264_11395 at 2640.222 kb on + strand, within CA264_11395 at 2640.245 kb on + strand, within CA264_11395 at 2640.245 kb on + strand, within CA264_11395 at 2640.245 kb on + strand, within CA264_11395 at 2640.246 kb on - strand, within CA264_11395 at 2640.246 kb on - strand, within CA264_11395 at 2640.255 kb on - strand, within CA264_11395 at 2640.276 kb on + strand, within CA264_11395 at 2640.296 kb on - strand, within CA264_11395 at 2640.327 kb on + strand, within CA264_11395 at 2640.327 kb on + strand, within CA264_11395 at 2640.340 kb on - strand, within CA264_11395 at 2640.340 kb on - strand, within CA264_11395 at 2640.343 kb on - strand, within CA264_11395 at 2640.346 kb on - strand, within CA264_11395 at 2640.352 kb on + strand, within CA264_11395 at 2640.352 kb on + strand, within CA264_11395 at 2640.353 kb on - strand, within CA264_11395 at 2640.413 kb on + strand, within CA264_11395 at 2640.444 kb on - strand, within CA264_11395 at 2640.475 kb on + strand, within CA264_11395 at 2640.478 kb on - strand, within CA264_11395 at 2640.492 kb on - strand, within CA264_11395 at 2640.492 kb on - strand, within CA264_11395 at 2640.492 kb on - strand, within CA264_11395 at 2640.512 kb on - strand, within CA264_11395 at 2640.512 kb on - strand, within CA264_11395 at 2640.537 kb on + strand, within CA264_11395 at 2640.662 kb on - strand, within CA264_11395 at 2640.713 kb on - strand, within CA264_11395 at 2640.714 kb on + strand, within CA264_11395 at 2640.788 kb on - strand at 2640.788 kb on - strand at 2640.788 kb on - strand at 2640.795 kb on - strand at 2640.812 kb on - strand at 2640.920 kb on - strand at 2640.923 kb on + strand at 2640.924 kb on - strand at 2640.938 kb on - strand at 2640.942 kb on + strand at 2640.956 kb on - strand at 2640.963 kb on + strand at 2640.963 kb on + strand at 2640.966 kb on + strand at 2640.966 kb on + strand at 2640.967 kb on - strand at 2640.985 kb on + strand at 2640.986 kb on - strand at 2640.996 kb on + strand at 2640.997 kb on - strand at 2640.997 kb on - strand at 2640.997 kb on - strand at 2640.997 kb on - strand at 2641.000 kb on + strand at 2641.001 kb on - strand at 2641.001 kb on - strand at 2641.001 kb on - strand at 2641.050 kb on - strand at 2641.071 kb on + strand at 2641.082 kb on + strand at 2641.083 kb on - strand at 2641.088 kb on - strand at 2641.088 kb on - strand at 2641.105 kb on + strand at 2641.106 kb on - strand at 2641.199 kb on - strand at 2641.202 kb on + strand at 2641.214 kb on + strand at 2641.222 kb on + strand at 2641.257 kb on + strand at 2641.257 kb on + strand at 2641.356 kb on + strand at 2641.374 kb on - strand at 2641.375 kb on + strand at 2641.375 kb on + strand at 2641.376 kb on - strand at 2641.422 kb on - strand at 2641.432 kb on + strand at 2641.433 kb on - strand at 2641.458 kb on + strand at 2641.476 kb on + strand at 2641.476 kb on + strand at 2641.476 kb on + strand at 2641.477 kb on - strand at 2641.480 kb on - strand at 2641.488 kb on + strand at 2641.489 kb on - strand at 2641.489 kb on - strand at 2641.549 kb on + strand at 2641.585 kb on - strand at 2641.589 kb on + strand at 2641.590 kb on - strand at 2641.590 kb on - strand at 2641.596 kb on - strand, within CA264_11400 at 2641.655 kb on - strand, within CA264_11400 at 2641.655 kb on - strand, within CA264_11400 at 2641.660 kb on + strand, within CA264_11400 at 2641.660 kb on + strand, within CA264_11400 at 2641.660 kb on + strand, within CA264_11400 at 2641.661 kb on - strand, within CA264_11400 at 2641.661 kb on - strand, within CA264_11400 at 2641.680 kb on - strand, within CA264_11400 at 2641.686 kb on - strand, within CA264_11400 at 2641.750 kb on - strand, within CA264_11400 at 2641.751 kb on + strand, within CA264_11400 at 2641.752 kb on - strand, within CA264_11400 at 2641.771 kb on + strand, within CA264_11400 at 2641.772 kb on - strand, within CA264_11400 at 2641.772 kb on - strand, within CA264_11400 at 2641.853 kb on + strand, within CA264_11400 at 2641.874 kb on + strand, within CA264_11400 at 2641.875 kb on - strand, within CA264_11400
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,638,678 + -0.6 2,638,679 - +0.8 2,638,700 - +0.1 2,638,714 - -0.6 2,638,723 + +0.3 2,638,724 - +0.3 2,638,758 - -0.3 2,638,774 - -0.3 2,638,777 - -0.2 2,638,778 + +0.3 2,638,778 + -0.2 2,638,779 - -1.3 2,638,781 - +0.5 2,638,787 + +0.2 2,638,787 + -0.6 2,638,787 + +0.7 2,638,788 - -0.2 2,638,826 + +0.6 2,638,826 + -0.5 2,638,826 + +0.3 2,638,826 + +0.5 2,638,827 - +0.7 2,638,827 - +0.4 2,638,827 - +0.1 2,638,829 + +0.7 2,638,829 + -0.4 2,638,830 - -0.5 2,639,086 - CA264_11390 0.64 -1.0 2,639,218 + +0.2 2,639,219 - +0.3 2,639,313 + -0.2 2,639,313 + -0.1 2,639,341 + -0.6 2,639,342 - -0.3 2,639,342 - -0.5 2,639,342 - +1.3 2,639,346 - +0.3 2,639,372 + +1.1 2,639,372 + +0.1 2,639,382 + +0.1 2,639,382 + +0.9 2,639,383 - -0.0 2,639,383 - -0.7 2,639,391 - -1.3 2,639,391 - -0.2 2,639,391 - -1.6 2,639,392 + -0.1 2,639,393 - +0.4 2,639,408 + -0.1 2,639,417 - -0.2 2,639,460 + +0.3 2,639,461 - -1.2 2,639,461 - +0.2 2,639,466 - -0.2 2,639,545 + +0.2 2,639,546 - +0.5 2,639,548 + +0.2 2,639,548 + -0.2 2,639,548 + -0.3 2,639,549 - +0.4 2,639,549 - -0.6 2,639,606 - +0.2 2,639,642 - +0.2 2,639,647 + +0.1 2,639,679 + -0.1 2,639,680 - -0.3 2,639,680 - +2.1 2,639,680 - -0.4 2,639,680 - +0.3 2,639,726 + -0.4 2,639,727 - +0.3 2,639,730 - -0.2 2,639,757 + -0.8 2,639,761 + -0.2 2,639,762 - -0.1 2,639,764 + -0.5 2,639,780 + -0.3 2,639,781 - -0.3 2,639,785 + -0.0 2,639,827 + CA264_11395 0.12 -0.3 2,639,829 + CA264_11395 0.13 +1.1 2,639,830 - CA264_11395 0.13 -0.9 2,639,890 + CA264_11395 0.18 +0.2 2,639,891 - CA264_11395 0.18 +0.0 2,639,985 - CA264_11395 0.26 -0.9 2,640,026 - CA264_11395 0.29 -0.2 2,640,093 + CA264_11395 0.34 -0.4 2,640,188 - CA264_11395 0.42 +0.2 2,640,188 - CA264_11395 0.42 +0.3 2,640,220 + CA264_11395 0.45 +0.2 2,640,222 + CA264_11395 0.45 -0.0 2,640,222 + CA264_11395 0.45 +1.5 2,640,245 + CA264_11395 0.47 +0.3 2,640,245 + CA264_11395 0.47 -1.3 2,640,245 + CA264_11395 0.47 +1.3 2,640,246 - CA264_11395 0.47 +0.6 2,640,246 - CA264_11395 0.47 +0.1 2,640,255 - CA264_11395 0.48 -0.5 2,640,276 + CA264_11395 0.50 -0.0 2,640,296 - CA264_11395 0.51 -0.2 2,640,327 + CA264_11395 0.54 -0.2 2,640,327 + CA264_11395 0.54 -0.3 2,640,340 - CA264_11395 0.55 -0.0 2,640,340 - CA264_11395 0.55 -0.5 2,640,343 - CA264_11395 0.55 +0.0 2,640,346 - CA264_11395 0.56 +0.0 2,640,352 + CA264_11395 0.56 +0.8 2,640,352 + CA264_11395 0.56 +1.2 2,640,353 - CA264_11395 0.56 +0.2 2,640,413 + CA264_11395 0.61 +0.3 2,640,444 - CA264_11395 0.64 +0.2 2,640,475 + CA264_11395 0.66 -0.7 2,640,478 - CA264_11395 0.67 -0.5 2,640,492 - CA264_11395 0.68 -0.4 2,640,492 - CA264_11395 0.68 -0.7 2,640,492 - CA264_11395 0.68 +0.1 2,640,512 - CA264_11395 0.69 +0.6 2,640,512 - CA264_11395 0.69 +0.4 2,640,537 + CA264_11395 0.71 +0.7 2,640,662 - CA264_11395 0.82 +0.2 2,640,713 - CA264_11395 0.86 +0.1 2,640,714 + CA264_11395 0.86 +0.1 2,640,788 - -0.2 2,640,788 - -2.2 2,640,788 - -2.4 2,640,795 - +0.5 2,640,812 - -0.0 2,640,920 - +0.7 2,640,923 + +0.5 2,640,924 - -0.3 2,640,938 - +0.6 2,640,942 + -0.4 2,640,956 - -0.2 2,640,963 + +0.2 2,640,963 + -0.0 2,640,966 + -0.2 2,640,966 + +0.9 2,640,967 - -0.7 2,640,985 + +1.7 2,640,986 - +1.5 2,640,996 + +0.2 2,640,997 - -1.6 2,640,997 - +0.2 2,640,997 - -1.6 2,640,997 - -0.6 2,641,000 + -1.2 2,641,001 - +0.2 2,641,001 - -0.7 2,641,001 - +1.2 2,641,050 - +0.8 2,641,071 + -0.5 2,641,082 + -0.1 2,641,083 - -2.6 2,641,088 - -0.3 2,641,088 - -0.0 2,641,105 + -0.3 2,641,106 - +0.4 2,641,199 - -0.1 2,641,202 + -0.2 2,641,214 + -0.3 2,641,222 + +0.1 2,641,257 + +1.1 2,641,257 + +0.0 2,641,356 + +0.3 2,641,374 - -0.2 2,641,375 + -0.4 2,641,375 + -0.2 2,641,376 - +1.0 2,641,422 - -0.9 2,641,432 + -0.8 2,641,433 - -0.2 2,641,458 + -0.3 2,641,476 + +1.1 2,641,476 + -0.3 2,641,476 + +1.0 2,641,477 - -0.3 2,641,480 - -0.5 2,641,488 + -0.2 2,641,489 - -0.5 2,641,489 - +0.4 2,641,549 + +0.1 2,641,585 - +0.6 2,641,589 + -1.5 2,641,590 - -1.0 2,641,590 - -0.2 2,641,596 - CA264_11400 0.10 +0.6 2,641,655 - CA264_11400 0.14 -1.2 2,641,655 - CA264_11400 0.14 -0.6 2,641,660 + CA264_11400 0.14 -0.2 2,641,660 + CA264_11400 0.14 +0.7 2,641,660 + CA264_11400 0.14 -0.2 2,641,661 - CA264_11400 0.14 -0.2 2,641,661 - CA264_11400 0.14 +0.8 2,641,680 - CA264_11400 0.15 -0.5 2,641,686 - CA264_11400 0.15 -0.2 2,641,750 - CA264_11400 0.19 -0.2 2,641,751 + CA264_11400 0.19 -0.0 2,641,752 - CA264_11400 0.19 -0.2 2,641,771 + CA264_11400 0.21 -0.1 2,641,772 - CA264_11400 0.21 -0.7 2,641,772 - CA264_11400 0.21 +0.6 2,641,853 + CA264_11400 0.25 -0.0 2,641,874 + CA264_11400 0.27 -0.5 2,641,875 - CA264_11400 0.27 -1.8
Or see this region's nucleotide sequence