Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11360 and CA264_11365 are separated by 58 nucleotides CA264_11365 and CA264_11370 are separated by 277 nucleotides CA264_11370 and CA264_11375 are separated by 114 nucleotides
CA264_11360: CA264_11360 - hypothetical protein, at 2,633,191 to 2,633,424
_11360
CA264_11365: CA264_11365 - hypothetical protein, at 2,633,483 to 2,633,989
_11365
CA264_11370: CA264_11370 - hypothetical protein, at 2,634,267 to 2,635,025
_11370
CA264_11375: CA264_11375 - hypothetical protein, at 2,635,140 to 2,635,472
_11375
Position (kb)
2634
2635
2636 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2633.294 kb on - strand, within CA264_11360 at 2633.366 kb on + strand, within CA264_11360 at 2633.386 kb on - strand, within CA264_11360 at 2633.410 kb on + strand at 2633.418 kb on + strand at 2633.423 kb on - strand at 2633.423 kb on - strand at 2633.442 kb on - strand at 2633.461 kb on + strand at 2633.462 kb on - strand at 2633.463 kb on + strand at 2633.464 kb on - strand at 2633.493 kb on + strand at 2633.523 kb on - strand at 2633.553 kb on + strand, within CA264_11365 at 2633.579 kb on - strand, within CA264_11365 at 2633.584 kb on + strand, within CA264_11365 at 2633.584 kb on + strand, within CA264_11365 at 2633.585 kb on - strand, within CA264_11365 at 2633.585 kb on - strand, within CA264_11365 at 2633.592 kb on - strand, within CA264_11365 at 2633.613 kb on - strand, within CA264_11365 at 2633.668 kb on - strand, within CA264_11365 at 2633.676 kb on + strand, within CA264_11365 at 2633.682 kb on - strand, within CA264_11365 at 2633.682 kb on - strand, within CA264_11365 at 2633.682 kb on - strand, within CA264_11365 at 2633.682 kb on - strand, within CA264_11365 at 2633.682 kb on - strand, within CA264_11365 at 2633.682 kb on - strand, within CA264_11365 at 2633.711 kb on - strand, within CA264_11365 at 2633.711 kb on - strand, within CA264_11365 at 2633.711 kb on - strand, within CA264_11365 at 2633.720 kb on - strand, within CA264_11365 at 2633.727 kb on - strand, within CA264_11365 at 2633.745 kb on - strand, within CA264_11365 at 2633.758 kb on + strand, within CA264_11365 at 2633.893 kb on + strand, within CA264_11365 at 2633.894 kb on - strand, within CA264_11365 at 2633.898 kb on - strand, within CA264_11365 at 2633.900 kb on + strand, within CA264_11365 at 2633.901 kb on - strand, within CA264_11365 at 2633.901 kb on - strand, within CA264_11365 at 2633.902 kb on + strand, within CA264_11365 at 2633.902 kb on + strand, within CA264_11365 at 2633.902 kb on + strand, within CA264_11365 at 2633.902 kb on + strand, within CA264_11365 at 2633.902 kb on + strand, within CA264_11365 at 2633.902 kb on + strand, within CA264_11365 at 2633.902 kb on + strand, within CA264_11365 at 2633.903 kb on - strand, within CA264_11365 at 2633.903 kb on - strand, within CA264_11365 at 2633.903 kb on - strand, within CA264_11365 at 2633.916 kb on + strand, within CA264_11365 at 2633.932 kb on + strand, within CA264_11365 at 2633.937 kb on - strand, within CA264_11365 at 2633.957 kb on + strand at 2633.993 kb on - strand at 2634.070 kb on - strand at 2634.072 kb on - strand at 2634.092 kb on - strand at 2634.107 kb on + strand at 2634.132 kb on + strand at 2634.234 kb on + strand at 2634.234 kb on + strand at 2634.248 kb on - strand at 2634.248 kb on - strand at 2634.353 kb on - strand, within CA264_11370 at 2634.388 kb on + strand, within CA264_11370 at 2634.388 kb on + strand, within CA264_11370 at 2634.393 kb on - strand, within CA264_11370 at 2634.393 kb on - strand, within CA264_11370 at 2634.394 kb on + strand, within CA264_11370 at 2634.394 kb on + strand, within CA264_11370 at 2634.395 kb on - strand, within CA264_11370 at 2634.400 kb on + strand, within CA264_11370 at 2634.488 kb on - strand, within CA264_11370 at 2634.516 kb on - strand, within CA264_11370 at 2634.533 kb on + strand, within CA264_11370 at 2634.539 kb on + strand, within CA264_11370 at 2634.539 kb on + strand, within CA264_11370 at 2634.540 kb on - strand, within CA264_11370 at 2634.540 kb on - strand, within CA264_11370 at 2634.540 kb on - strand, within CA264_11370 at 2634.637 kb on + strand, within CA264_11370 at 2634.638 kb on - strand, within CA264_11370 at 2634.638 kb on - strand, within CA264_11370 at 2634.664 kb on - strand, within CA264_11370 at 2634.715 kb on + strand, within CA264_11370 at 2634.716 kb on - strand, within CA264_11370 at 2634.718 kb on + strand, within CA264_11370 at 2634.728 kb on + strand, within CA264_11370 at 2634.751 kb on + strand, within CA264_11370 at 2634.757 kb on + strand, within CA264_11370 at 2634.757 kb on + strand, within CA264_11370 at 2634.758 kb on - strand, within CA264_11370 at 2634.758 kb on - strand, within CA264_11370 at 2634.776 kb on + strand, within CA264_11370 at 2634.790 kb on - strand, within CA264_11370 at 2634.816 kb on + strand, within CA264_11370 at 2634.817 kb on - strand, within CA264_11370 at 2634.830 kb on + strand, within CA264_11370 at 2634.914 kb on + strand, within CA264_11370 at 2634.919 kb on + strand, within CA264_11370 at 2634.920 kb on - strand, within CA264_11370 at 2634.920 kb on - strand, within CA264_11370 at 2634.961 kb on + strand at 2634.961 kb on + strand at 2634.962 kb on - strand at 2634.972 kb on - strand at 2635.091 kb on + strand at 2635.119 kb on - strand at 2635.130 kb on + strand at 2635.141 kb on + strand at 2635.181 kb on + strand, within CA264_11375 at 2635.182 kb on - strand, within CA264_11375 at 2635.182 kb on - strand, within CA264_11375 at 2635.196 kb on + strand, within CA264_11375 at 2635.197 kb on - strand, within CA264_11375 at 2635.197 kb on - strand, within CA264_11375 at 2635.230 kb on + strand, within CA264_11375 at 2635.263 kb on + strand, within CA264_11375 at 2635.264 kb on - strand, within CA264_11375 at 2635.264 kb on - strand, within CA264_11375 at 2635.266 kb on - strand, within CA264_11375 at 2635.266 kb on - strand, within CA264_11375 at 2635.286 kb on + strand, within CA264_11375 at 2635.287 kb on - strand, within CA264_11375 at 2635.302 kb on - strand, within CA264_11375 at 2635.306 kb on - strand, within CA264_11375 at 2635.340 kb on + strand, within CA264_11375 at 2635.341 kb on - strand, within CA264_11375 at 2635.342 kb on + strand, within CA264_11375 at 2635.355 kb on + strand, within CA264_11375 at 2635.401 kb on - strand, within CA264_11375 at 2635.403 kb on + strand, within CA264_11375 at 2635.403 kb on + strand, within CA264_11375 at 2635.403 kb on + strand, within CA264_11375 at 2635.404 kb on - strand, within CA264_11375 at 2635.465 kb on - strand at 2635.465 kb on - strand at 2635.466 kb on + strand at 2635.466 kb on + strand at 2635.467 kb on - strand at 2635.467 kb on - strand at 2635.467 kb on - strand at 2635.467 kb on - strand at 2635.468 kb on + strand at 2635.468 kb on + strand at 2635.468 kb on + strand at 2635.468 kb on + strand at 2635.468 kb on + strand at 2635.469 kb on - strand at 2635.469 kb on - strand at 2635.469 kb on - strand at 2635.472 kb on + strand at 2635.472 kb on + strand at 2635.473 kb on - strand at 2635.473 kb on - strand at 2635.509 kb on - strand at 2635.521 kb on + strand at 2635.521 kb on + strand at 2635.522 kb on - strand at 2635.524 kb on + strand at 2635.533 kb on + strand at 2635.564 kb on + strand at 2635.564 kb on + strand at 2635.565 kb on - strand at 2635.622 kb on + strand at 2635.623 kb on - strand at 2635.623 kb on - strand at 2635.628 kb on - strand at 2635.632 kb on - strand at 2635.637 kb on - strand at 2635.637 kb on - strand at 2635.639 kb on - strand at 2635.639 kb on - strand at 2635.646 kb on - strand at 2635.650 kb on - strand at 2635.650 kb on - strand at 2635.650 kb on - strand at 2635.710 kb on - strand at 2635.763 kb on + strand at 2635.764 kb on - strand at 2635.797 kb on + strand at 2635.798 kb on - strand at 2635.848 kb on + strand at 2635.849 kb on - strand at 2635.849 kb on - strand at 2635.852 kb on + strand at 2635.852 kb on + strand at 2635.853 kb on - strand at 2635.856 kb on + strand at 2635.857 kb on - strand at 2635.857 kb on - strand at 2635.857 kb on - strand at 2635.904 kb on - strand at 2635.920 kb on - strand at 2635.938 kb on - strand at 2635.981 kb on + strand at 2635.982 kb on - strand at 2635.982 kb on - strand at 2635.989 kb on + strand at 2635.990 kb on - strand at 2635.990 kb on - strand at 2635.990 kb on - strand at 2635.993 kb on + strand at 2635.993 kb on + strand at 2635.996 kb on - strand at 2636.023 kb on + strand at 2636.024 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,633,294 - CA264_11360 0.44 +0.0 2,633,366 + CA264_11360 0.75 +0.1 2,633,386 - CA264_11360 0.83 -0.1 2,633,410 + -0.7 2,633,418 + +0.4 2,633,423 - -0.1 2,633,423 - -0.1 2,633,442 - +0.2 2,633,461 + +0.6 2,633,462 - +0.6 2,633,463 + +0.4 2,633,464 - +0.6 2,633,493 + -0.1 2,633,523 - +0.1 2,633,553 + CA264_11365 0.14 -0.7 2,633,579 - CA264_11365 0.19 -1.1 2,633,584 + CA264_11365 0.20 +0.1 2,633,584 + CA264_11365 0.20 +0.2 2,633,585 - CA264_11365 0.20 -0.7 2,633,585 - CA264_11365 0.20 +1.7 2,633,592 - CA264_11365 0.21 -1.4 2,633,613 - CA264_11365 0.26 -0.0 2,633,668 - CA264_11365 0.36 -0.6 2,633,676 + CA264_11365 0.38 +0.2 2,633,682 - CA264_11365 0.39 +0.6 2,633,682 - CA264_11365 0.39 +0.7 2,633,682 - CA264_11365 0.39 -0.1 2,633,682 - CA264_11365 0.39 -0.1 2,633,682 - CA264_11365 0.39 -0.0 2,633,682 - CA264_11365 0.39 -0.1 2,633,711 - CA264_11365 0.45 -0.2 2,633,711 - CA264_11365 0.45 -0.0 2,633,711 - CA264_11365 0.45 -1.3 2,633,720 - CA264_11365 0.47 +0.9 2,633,727 - CA264_11365 0.48 +0.7 2,633,745 - CA264_11365 0.52 +0.4 2,633,758 + CA264_11365 0.54 +0.1 2,633,893 + CA264_11365 0.81 -0.0 2,633,894 - CA264_11365 0.81 -0.1 2,633,898 - CA264_11365 0.82 +0.9 2,633,900 + CA264_11365 0.82 +0.2 2,633,901 - CA264_11365 0.82 +0.2 2,633,901 - CA264_11365 0.82 +0.4 2,633,902 + CA264_11365 0.83 -0.1 2,633,902 + CA264_11365 0.83 -0.0 2,633,902 + CA264_11365 0.83 +0.2 2,633,902 + CA264_11365 0.83 -1.7 2,633,902 + CA264_11365 0.83 +0.0 2,633,902 + CA264_11365 0.83 +0.1 2,633,902 + CA264_11365 0.83 -0.1 2,633,903 - CA264_11365 0.83 -1.1 2,633,903 - CA264_11365 0.83 -0.0 2,633,903 - CA264_11365 0.83 +0.4 2,633,916 + CA264_11365 0.85 +0.4 2,633,932 + CA264_11365 0.89 +0.2 2,633,937 - CA264_11365 0.90 -0.3 2,633,957 + -0.6 2,633,993 - +0.1 2,634,070 - +1.0 2,634,072 - +0.3 2,634,092 - -0.0 2,634,107 + -0.4 2,634,132 + +0.3 2,634,234 + -0.3 2,634,234 + +0.2 2,634,248 - -0.3 2,634,248 - -0.2 2,634,353 - CA264_11370 0.11 +0.5 2,634,388 + CA264_11370 0.16 +0.4 2,634,388 + CA264_11370 0.16 +0.7 2,634,393 - CA264_11370 0.17 -1.0 2,634,393 - CA264_11370 0.17 +0.5 2,634,394 + CA264_11370 0.17 -0.5 2,634,394 + CA264_11370 0.17 +0.4 2,634,395 - CA264_11370 0.17 -1.2 2,634,400 + CA264_11370 0.18 -0.2 2,634,488 - CA264_11370 0.29 -0.0 2,634,516 - CA264_11370 0.33 -1.3 2,634,533 + CA264_11370 0.35 +0.5 2,634,539 + CA264_11370 0.36 -0.6 2,634,539 + CA264_11370 0.36 -0.3 2,634,540 - CA264_11370 0.36 +1.2 2,634,540 - CA264_11370 0.36 -0.3 2,634,540 - CA264_11370 0.36 +0.4 2,634,637 + CA264_11370 0.49 -0.4 2,634,638 - CA264_11370 0.49 -0.2 2,634,638 - CA264_11370 0.49 +0.0 2,634,664 - CA264_11370 0.52 -0.9 2,634,715 + CA264_11370 0.59 +0.8 2,634,716 - CA264_11370 0.59 +0.1 2,634,718 + CA264_11370 0.59 -0.0 2,634,728 + CA264_11370 0.61 -0.3 2,634,751 + CA264_11370 0.64 -0.6 2,634,757 + CA264_11370 0.65 +0.6 2,634,757 + CA264_11370 0.65 -0.3 2,634,758 - CA264_11370 0.65 +0.1 2,634,758 - CA264_11370 0.65 +0.4 2,634,776 + CA264_11370 0.67 -2.3 2,634,790 - CA264_11370 0.69 -0.5 2,634,816 + CA264_11370 0.72 -0.7 2,634,817 - CA264_11370 0.72 -0.7 2,634,830 + CA264_11370 0.74 -0.1 2,634,914 + CA264_11370 0.85 -0.5 2,634,919 + CA264_11370 0.86 -2.4 2,634,920 - CA264_11370 0.86 +0.9 2,634,920 - CA264_11370 0.86 -0.4 2,634,961 + +0.3 2,634,961 + -0.1 2,634,962 - -0.4 2,634,972 - +0.9 2,635,091 + -0.9 2,635,119 - -1.8 2,635,130 + +0.7 2,635,141 + -0.5 2,635,181 + CA264_11375 0.12 -0.9 2,635,182 - CA264_11375 0.13 +0.7 2,635,182 - CA264_11375 0.13 -0.1 2,635,196 + CA264_11375 0.17 +0.3 2,635,197 - CA264_11375 0.17 -0.0 2,635,197 - CA264_11375 0.17 -0.3 2,635,230 + CA264_11375 0.27 +1.6 2,635,263 + CA264_11375 0.37 +0.6 2,635,264 - CA264_11375 0.37 -1.2 2,635,264 - CA264_11375 0.37 -0.5 2,635,266 - CA264_11375 0.38 +0.2 2,635,266 - CA264_11375 0.38 +0.3 2,635,286 + CA264_11375 0.44 +0.6 2,635,287 - CA264_11375 0.44 -0.0 2,635,302 - CA264_11375 0.49 -0.0 2,635,306 - CA264_11375 0.50 -0.4 2,635,340 + CA264_11375 0.60 -0.8 2,635,341 - CA264_11375 0.60 -0.5 2,635,342 + CA264_11375 0.61 +0.4 2,635,355 + CA264_11375 0.65 -0.1 2,635,401 - CA264_11375 0.78 -0.0 2,635,403 + CA264_11375 0.79 -0.9 2,635,403 + CA264_11375 0.79 -0.3 2,635,403 + CA264_11375 0.79 -0.1 2,635,404 - CA264_11375 0.79 +0.5 2,635,465 - -0.4 2,635,465 - +0.3 2,635,466 + -0.2 2,635,466 + -0.4 2,635,467 - -0.5 2,635,467 - +0.7 2,635,467 - +0.8 2,635,467 - -0.4 2,635,468 + -0.2 2,635,468 + -0.3 2,635,468 + -0.7 2,635,468 + -1.0 2,635,468 + +0.3 2,635,469 - +1.1 2,635,469 - -0.2 2,635,469 - +1.3 2,635,472 + -0.3 2,635,472 + +0.4 2,635,473 - -0.8 2,635,473 - -0.5 2,635,509 - -0.2 2,635,521 + +0.4 2,635,521 + +0.3 2,635,522 - +0.3 2,635,524 + +0.7 2,635,533 + +0.2 2,635,564 + +1.0 2,635,564 + +0.1 2,635,565 - -1.3 2,635,622 + +0.2 2,635,623 - +0.9 2,635,623 - +0.5 2,635,628 - +0.5 2,635,632 - -0.3 2,635,637 - +0.4 2,635,637 - +1.1 2,635,639 - -0.3 2,635,639 - +0.0 2,635,646 - -0.4 2,635,650 - +0.4 2,635,650 - -0.0 2,635,650 - -0.7 2,635,710 - +0.7 2,635,763 + +1.3 2,635,764 - +0.5 2,635,797 + +0.3 2,635,798 - +1.9 2,635,848 + +0.6 2,635,849 - -0.2 2,635,849 - +0.6 2,635,852 + -0.3 2,635,852 + -1.0 2,635,853 - -1.7 2,635,856 + +0.3 2,635,857 - -0.2 2,635,857 - -0.2 2,635,857 - -0.1 2,635,904 - -0.1 2,635,920 - +1.3 2,635,938 - +0.4 2,635,981 + +0.1 2,635,982 - -0.4 2,635,982 - +0.1 2,635,989 + +0.3 2,635,990 - +0.6 2,635,990 - -0.2 2,635,990 - +0.3 2,635,993 + +0.2 2,635,993 + -0.3 2,635,996 - +0.1 2,636,023 + +0.1 2,636,024 - -0.4
Or see this region's nucleotide sequence