Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10315 and CA264_10320 are separated by 97 nucleotides CA264_10320 and CA264_10325 are separated by 194 nucleotides CA264_10325 and CA264_10330 overlap by 13 nucleotides
CA264_10315: CA264_10315 - DNA-binding protein, at 2,398,025 to 2,398,633
_10315
CA264_10320: CA264_10320 - hypothetical protein, at 2,398,731 to 2,399,615
_10320
CA264_10325: CA264_10325 - plasmid mobilization relaxosome protein MobC, at 2,399,810 to 2,400,199
_10325
CA264_10330: CA264_10330 - hypothetical protein, at 2,400,187 to 2,401,440
_10330
Position (kb)
2398
2399
2400 Strain fitness (log2 ratio)
-2
-1
0
1 at 2397.886 kb on + strand at 2397.890 kb on + strand at 2397.891 kb on - strand at 2397.895 kb on + strand at 2397.895 kb on + strand at 2397.895 kb on + strand at 2397.895 kb on + strand at 2397.896 kb on - strand at 2397.898 kb on + strand at 2397.908 kb on + strand at 2397.910 kb on + strand at 2397.910 kb on + strand at 2397.963 kb on - strand at 2398.004 kb on + strand at 2398.004 kb on + strand at 2398.004 kb on + strand at 2398.005 kb on - strand at 2398.203 kb on - strand, within CA264_10315 at 2398.268 kb on - strand, within CA264_10315 at 2398.384 kb on + strand, within CA264_10315 at 2398.385 kb on - strand, within CA264_10315 at 2398.416 kb on - strand, within CA264_10315 at 2398.416 kb on - strand, within CA264_10315 at 2398.521 kb on - strand, within CA264_10315 at 2398.553 kb on - strand, within CA264_10315 at 2398.725 kb on + strand at 2398.731 kb on - strand at 2398.731 kb on - strand at 2398.849 kb on - strand, within CA264_10320 at 2398.862 kb on - strand, within CA264_10320 at 2398.914 kb on + strand, within CA264_10320 at 2398.915 kb on - strand, within CA264_10320 at 2399.060 kb on - strand, within CA264_10320 at 2399.139 kb on - strand, within CA264_10320 at 2399.171 kb on - strand, within CA264_10320 at 2399.181 kb on + strand, within CA264_10320 at 2399.238 kb on + strand, within CA264_10320 at 2399.239 kb on - strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.455 kb on + strand, within CA264_10320 at 2399.456 kb on - strand, within CA264_10320 at 2399.456 kb on - strand, within CA264_10320 at 2399.456 kb on - strand, within CA264_10320 at 2399.457 kb on + strand, within CA264_10320 at 2399.458 kb on - strand, within CA264_10320 at 2399.464 kb on - strand, within CA264_10320 at 2399.617 kb on + strand at 2399.617 kb on + strand at 2399.617 kb on + strand at 2399.646 kb on - strand at 2399.651 kb on + strand at 2399.659 kb on - strand at 2399.773 kb on - strand at 2399.796 kb on + strand at 2399.796 kb on + strand at 2399.797 kb on - strand at 2399.797 kb on - strand at 2399.800 kb on + strand at 2399.800 kb on + strand at 2399.801 kb on - strand at 2399.801 kb on - strand at 2399.801 kb on - strand at 2399.801 kb on - strand at 2399.803 kb on + strand at 2399.804 kb on - strand at 2399.804 kb on - strand at 2399.825 kb on - strand at 2400.105 kb on + strand, within CA264_10325 at 2400.201 kb on + strand at 2400.232 kb on + strand at 2400.236 kb on - strand at 2400.289 kb on + strand at 2400.455 kb on - strand, within CA264_10330 at 2400.488 kb on - strand, within CA264_10330 at 2400.579 kb on + strand, within CA264_10330 at 2400.580 kb on - strand, within CA264_10330
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,397,886 + -0.6 2,397,890 + -0.3 2,397,891 - +0.7 2,397,895 + -2.6 2,397,895 + +0.0 2,397,895 + -0.8 2,397,895 + -0.4 2,397,896 - -0.1 2,397,898 + -1.6 2,397,908 + -0.3 2,397,910 + -0.8 2,397,910 + -0.2 2,397,963 - +0.2 2,398,004 + -0.9 2,398,004 + -0.3 2,398,004 + +0.3 2,398,005 - -0.2 2,398,203 - CA264_10315 0.29 +1.2 2,398,268 - CA264_10315 0.40 +0.2 2,398,384 + CA264_10315 0.59 +1.3 2,398,385 - CA264_10315 0.59 +0.1 2,398,416 - CA264_10315 0.64 +0.0 2,398,416 - CA264_10315 0.64 -0.4 2,398,521 - CA264_10315 0.81 -1.5 2,398,553 - CA264_10315 0.87 +0.0 2,398,725 + +0.0 2,398,731 - -0.0 2,398,731 - -0.5 2,398,849 - CA264_10320 0.13 -0.1 2,398,862 - CA264_10320 0.15 -0.2 2,398,914 + CA264_10320 0.21 +0.2 2,398,915 - CA264_10320 0.21 +0.2 2,399,060 - CA264_10320 0.37 -1.0 2,399,139 - CA264_10320 0.46 +0.4 2,399,171 - CA264_10320 0.50 -0.7 2,399,181 + CA264_10320 0.51 -1.8 2,399,238 + CA264_10320 0.57 +0.4 2,399,239 - CA264_10320 0.57 -0.6 2,399,455 + CA264_10320 0.82 -0.4 2,399,455 + CA264_10320 0.82 -0.7 2,399,455 + CA264_10320 0.82 -0.7 2,399,455 + CA264_10320 0.82 -0.7 2,399,455 + CA264_10320 0.82 +0.1 2,399,456 - CA264_10320 0.82 +0.1 2,399,456 - CA264_10320 0.82 -0.7 2,399,456 - CA264_10320 0.82 +0.1 2,399,457 + CA264_10320 0.82 +0.8 2,399,458 - CA264_10320 0.82 -0.6 2,399,464 - CA264_10320 0.83 -1.0 2,399,617 + -0.2 2,399,617 + +0.3 2,399,617 + -0.0 2,399,646 - -0.3 2,399,651 + +0.3 2,399,659 - -0.1 2,399,773 - -1.0 2,399,796 + -0.3 2,399,796 + +0.7 2,399,797 - -0.6 2,399,797 - -0.2 2,399,800 + -0.4 2,399,800 + +0.0 2,399,801 - +0.0 2,399,801 - +0.1 2,399,801 - -0.1 2,399,801 - -0.6 2,399,803 + +1.2 2,399,804 - -0.3 2,399,804 - -0.4 2,399,825 - -0.5 2,400,105 + CA264_10325 0.76 +0.4 2,400,201 + +0.2 2,400,232 + +0.2 2,400,236 - +1.1 2,400,289 + +0.0 2,400,455 - CA264_10330 0.21 -0.9 2,400,488 - CA264_10330 0.24 +0.0 2,400,579 + CA264_10330 0.31 -1.0 2,400,580 - CA264_10330 0.31 +0.7
Or see this region's nucleotide sequence