Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08970 and CA264_08975 are separated by 137 nucleotides CA264_08975 and CA264_08980 are separated by 120 nucleotides CA264_08980 and CA264_08985 are separated by 3 nucleotides
CA264_08970: CA264_08970 - glycoside hydrolase family 15, at 2,094,520 to 2,096,244
_08970
CA264_08975: CA264_08975 - hypothetical protein, at 2,096,382 to 2,097,305
_08975
CA264_08980: CA264_08980 - hypothetical protein, at 2,097,426 to 2,097,794
_08980
CA264_08985: CA264_08985 - glycosyl transferase family 2, at 2,097,798 to 2,099,267
_08985
Position (kb)
2096
2097
2098 Strain fitness (log2 ratio)
-2
-1
0
1 at 2095.502 kb on + strand, within CA264_08970 at 2095.502 kb on + strand, within CA264_08970 at 2095.554 kb on + strand, within CA264_08970 at 2095.634 kb on + strand, within CA264_08970 at 2095.710 kb on + strand, within CA264_08970 at 2095.828 kb on + strand, within CA264_08970 at 2095.829 kb on - strand, within CA264_08970 at 2095.834 kb on + strand, within CA264_08970 at 2095.898 kb on - strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2096.151 kb on - strand at 2096.158 kb on + strand at 2096.178 kb on + strand at 2096.178 kb on + strand at 2096.181 kb on - strand at 2096.181 kb on - strand at 2096.250 kb on - strand at 2096.285 kb on - strand at 2096.287 kb on - strand at 2096.287 kb on - strand at 2096.325 kb on + strand at 2096.374 kb on + strand at 2096.383 kb on + strand at 2096.384 kb on - strand at 2096.394 kb on + strand at 2096.509 kb on - strand, within CA264_08975 at 2096.583 kb on - strand, within CA264_08975 at 2096.584 kb on + strand, within CA264_08975 at 2096.850 kb on - strand, within CA264_08975 at 2096.852 kb on - strand, within CA264_08975 at 2096.937 kb on - strand, within CA264_08975 at 2096.941 kb on + strand, within CA264_08975 at 2096.941 kb on + strand, within CA264_08975 at 2096.941 kb on + strand, within CA264_08975 at 2096.951 kb on + strand, within CA264_08975 at 2096.974 kb on + strand, within CA264_08975 at 2096.974 kb on + strand, within CA264_08975 at 2096.981 kb on - strand, within CA264_08975 at 2097.096 kb on + strand, within CA264_08975 at 2097.158 kb on - strand, within CA264_08975 at 2097.158 kb on - strand, within CA264_08975 at 2097.184 kb on + strand, within CA264_08975 at 2097.191 kb on - strand, within CA264_08975 at 2097.214 kb on - strand at 2097.364 kb on + strand at 2097.430 kb on - strand at 2097.489 kb on + strand, within CA264_08980 at 2097.525 kb on + strand, within CA264_08980 at 2097.526 kb on - strand, within CA264_08980 at 2097.526 kb on - strand, within CA264_08980 at 2097.637 kb on + strand, within CA264_08980 at 2097.638 kb on - strand, within CA264_08980 at 2097.673 kb on + strand, within CA264_08980 at 2097.674 kb on - strand, within CA264_08980 at 2097.700 kb on + strand, within CA264_08980 at 2097.700 kb on + strand, within CA264_08980 at 2097.781 kb on - strand at 2097.801 kb on + strand at 2097.801 kb on + strand at 2097.801 kb on - strand at 2097.820 kb on + strand at 2097.959 kb on - strand, within CA264_08985 at 2098.192 kb on + strand, within CA264_08985
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 2,095,502 + CA264_08970 0.57 +0.7 2,095,502 + CA264_08970 0.57 +0.3 2,095,554 + CA264_08970 0.60 +1.5 2,095,634 + CA264_08970 0.65 -0.6 2,095,710 + CA264_08970 0.69 -1.2 2,095,828 + CA264_08970 0.76 -0.2 2,095,829 - CA264_08970 0.76 -0.4 2,095,834 + CA264_08970 0.76 -0.1 2,095,898 - CA264_08970 0.80 +0.7 2,095,970 + CA264_08970 0.84 -0.0 2,095,970 + CA264_08970 0.84 -0.9 2,095,970 + CA264_08970 0.84 -0.2 2,095,970 + CA264_08970 0.84 +0.3 2,095,970 + CA264_08970 0.84 -0.1 2,096,151 - -0.2 2,096,158 + +0.2 2,096,178 + +0.8 2,096,178 + +0.3 2,096,181 - +0.3 2,096,181 - -1.2 2,096,250 - -0.3 2,096,285 - +0.4 2,096,287 - -0.0 2,096,287 - -0.4 2,096,325 + +0.1 2,096,374 + +0.0 2,096,383 + +0.0 2,096,384 - +0.7 2,096,394 + -0.7 2,096,509 - CA264_08975 0.14 -0.1 2,096,583 - CA264_08975 0.22 -0.8 2,096,584 + CA264_08975 0.22 +0.3 2,096,850 - CA264_08975 0.51 -0.5 2,096,852 - CA264_08975 0.51 -0.1 2,096,937 - CA264_08975 0.60 -0.3 2,096,941 + CA264_08975 0.60 +0.6 2,096,941 + CA264_08975 0.60 -0.9 2,096,941 + CA264_08975 0.60 -2.6 2,096,951 + CA264_08975 0.62 -0.3 2,096,974 + CA264_08975 0.64 +0.6 2,096,974 + CA264_08975 0.64 -0.1 2,096,981 - CA264_08975 0.65 -0.1 2,097,096 + CA264_08975 0.77 -0.2 2,097,158 - CA264_08975 0.84 -0.8 2,097,158 - CA264_08975 0.84 +0.1 2,097,184 + CA264_08975 0.87 -0.0 2,097,191 - CA264_08975 0.88 -0.1 2,097,214 - +0.3 2,097,364 + +0.1 2,097,430 - -0.1 2,097,489 + CA264_08980 0.17 -0.1 2,097,525 + CA264_08980 0.27 -0.3 2,097,526 - CA264_08980 0.27 -0.6 2,097,526 - CA264_08980 0.27 -0.5 2,097,637 + CA264_08980 0.57 +0.8 2,097,638 - CA264_08980 0.57 +0.6 2,097,673 + CA264_08980 0.67 +1.4 2,097,674 - CA264_08980 0.67 -1.2 2,097,700 + CA264_08980 0.74 +0.0 2,097,700 + CA264_08980 0.74 -0.9 2,097,781 - -1.2 2,097,801 + -0.2 2,097,801 + -1.2 2,097,801 - +0.1 2,097,820 + -0.3 2,097,959 - CA264_08985 0.11 +0.1 2,098,192 + CA264_08985 0.27 -0.2
Or see this region's nucleotide sequence