Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08105 and CA264_08110 are separated by 114 nucleotides CA264_08110 and CA264_08115 are separated by 18 nucleotides CA264_08115 and CA264_08120 are separated by 3 nucleotides CA264_08120 and CA264_08125 are separated by 67 nucleotides
CA264_08105: CA264_08105 - NupC/NupG family nucleoside CNT transporter, at 1,870,580 to 1,871,881
_08105
CA264_08110: CA264_08110 - hypothetical protein, at 1,871,996 to 1,872,601
_08110
CA264_08115: CA264_08115 - electron transfer flavoprotein subunit alpha, at 1,872,620 to 1,873,597
_08115
CA264_08120: CA264_08120 - electron transfer flavoprotein subunit alpha, at 1,873,601 to 1,874,341
_08120
CA264_08125: CA264_08125 - tetratricopeptide repeat protein, at 1,874,409 to 1,874,741
_08125
Position (kb)
1872
1873
1874 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1871.878 kb on - strand at 1871.884 kb on + strand at 1871.884 kb on + strand at 1871.884 kb on + strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.885 kb on - strand at 1871.982 kb on + strand at 1871.983 kb on - strand at 1872.042 kb on + strand at 1872.131 kb on - strand, within CA264_08110 at 1872.196 kb on + strand, within CA264_08110 at 1872.196 kb on + strand, within CA264_08110 at 1872.201 kb on - strand, within CA264_08110 at 1872.203 kb on - strand, within CA264_08110 at 1872.230 kb on + strand, within CA264_08110 at 1872.237 kb on + strand, within CA264_08110 at 1872.237 kb on + strand, within CA264_08110 at 1872.237 kb on + strand, within CA264_08110 at 1872.238 kb on - strand, within CA264_08110 at 1872.241 kb on + strand, within CA264_08110 at 1872.336 kb on + strand, within CA264_08110 at 1872.383 kb on + strand, within CA264_08110 at 1872.384 kb on - strand, within CA264_08110 at 1872.410 kb on - strand, within CA264_08110 at 1872.443 kb on + strand, within CA264_08110 at 1872.614 kb on + strand at 1872.621 kb on + strand at 1872.629 kb on + strand at 1872.730 kb on + strand, within CA264_08115 at 1872.790 kb on + strand, within CA264_08115 at 1872.791 kb on - strand, within CA264_08115 at 1872.794 kb on + strand, within CA264_08115 at 1872.804 kb on + strand, within CA264_08115 at 1872.805 kb on - strand, within CA264_08115 at 1872.805 kb on - strand, within CA264_08115 at 1872.805 kb on - strand, within CA264_08115 at 1872.824 kb on - strand, within CA264_08115 at 1872.827 kb on - strand, within CA264_08115 at 1873.246 kb on + strand, within CA264_08115 at 1873.246 kb on + strand, within CA264_08115 at 1873.247 kb on - strand, within CA264_08115 at 1873.282 kb on + strand, within CA264_08115 at 1873.347 kb on - strand, within CA264_08115 at 1873.583 kb on + strand at 1873.586 kb on + strand at 1873.589 kb on + strand at 1873.598 kb on - strand at 1873.598 kb on - strand at 1873.598 kb on - strand at 1873.598 kb on - strand at 1873.602 kb on + strand at 1873.602 kb on + strand at 1873.612 kb on + strand at 1873.612 kb on + strand at 1873.628 kb on + strand at 1873.633 kb on + strand at 1873.634 kb on - strand at 1873.699 kb on - strand, within CA264_08120 at 1873.703 kb on + strand, within CA264_08120 at 1873.704 kb on - strand, within CA264_08120 at 1873.708 kb on - strand, within CA264_08120 at 1873.894 kb on + strand, within CA264_08120 at 1873.964 kb on - strand, within CA264_08120 at 1874.015 kb on - strand, within CA264_08120 at 1874.019 kb on + strand, within CA264_08120 at 1874.019 kb on + strand, within CA264_08120 at 1874.020 kb on - strand, within CA264_08120 at 1874.044 kb on + strand, within CA264_08120 at 1874.162 kb on + strand, within CA264_08120 at 1874.166 kb on - strand, within CA264_08120 at 1874.240 kb on + strand, within CA264_08120 at 1874.241 kb on - strand, within CA264_08120 at 1874.285 kb on - strand at 1874.346 kb on - strand at 1874.368 kb on + strand at 1874.390 kb on - strand at 1874.426 kb on - strand at 1874.476 kb on + strand, within CA264_08125 at 1874.477 kb on - strand, within CA264_08125 at 1874.479 kb on - strand, within CA264_08125 at 1874.496 kb on + strand, within CA264_08125 at 1874.563 kb on - strand, within CA264_08125 at 1874.566 kb on + strand, within CA264_08125 at 1874.575 kb on - strand, within CA264_08125 at 1874.577 kb on + strand, within CA264_08125 at 1874.577 kb on + strand, within CA264_08125 at 1874.577 kb on + strand, within CA264_08125 at 1874.593 kb on + strand, within CA264_08125 at 1874.594 kb on - strand, within CA264_08125
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,871,878 - +2.1 1,871,884 + +0.1 1,871,884 + -0.2 1,871,884 + -0.3 1,871,885 - -0.1 1,871,885 - -1.4 1,871,885 - -0.5 1,871,885 - -0.6 1,871,885 - -0.7 1,871,982 + -1.3 1,871,983 - -0.6 1,872,042 + +0.4 1,872,131 - CA264_08110 0.22 +0.9 1,872,196 + CA264_08110 0.33 +0.1 1,872,196 + CA264_08110 0.33 +0.5 1,872,201 - CA264_08110 0.34 -0.5 1,872,203 - CA264_08110 0.34 +1.1 1,872,230 + CA264_08110 0.39 -1.2 1,872,237 + CA264_08110 0.40 -0.2 1,872,237 + CA264_08110 0.40 -0.3 1,872,237 + CA264_08110 0.40 +0.3 1,872,238 - CA264_08110 0.40 +0.4 1,872,241 + CA264_08110 0.40 -0.5 1,872,336 + CA264_08110 0.56 -0.7 1,872,383 + CA264_08110 0.64 -1.3 1,872,384 - CA264_08110 0.64 +0.3 1,872,410 - CA264_08110 0.68 -0.5 1,872,443 + CA264_08110 0.74 -0.8 1,872,614 + -0.4 1,872,621 + -0.7 1,872,629 + -3.9 1,872,730 + CA264_08115 0.11 -1.4 1,872,790 + CA264_08115 0.17 -0.9 1,872,791 - CA264_08115 0.17 +0.1 1,872,794 + CA264_08115 0.18 -1.4 1,872,804 + CA264_08115 0.19 -0.1 1,872,805 - CA264_08115 0.19 -0.6 1,872,805 - CA264_08115 0.19 -0.5 1,872,805 - CA264_08115 0.19 -0.7 1,872,824 - CA264_08115 0.21 -0.2 1,872,827 - CA264_08115 0.21 -1.1 1,873,246 + CA264_08115 0.64 +0.8 1,873,246 + CA264_08115 0.64 +1.8 1,873,247 - CA264_08115 0.64 -1.1 1,873,282 + CA264_08115 0.68 -0.5 1,873,347 - CA264_08115 0.74 +0.1 1,873,583 + -0.1 1,873,586 + -0.1 1,873,589 + -0.8 1,873,598 - +1.4 1,873,598 - -0.7 1,873,598 - -0.1 1,873,598 - -0.5 1,873,602 + -1.6 1,873,602 + -0.4 1,873,612 + -0.7 1,873,612 + -0.1 1,873,628 + +0.0 1,873,633 + -0.3 1,873,634 - -0.0 1,873,699 - CA264_08120 0.13 -0.8 1,873,703 + CA264_08120 0.14 -2.3 1,873,704 - CA264_08120 0.14 -1.8 1,873,708 - CA264_08120 0.14 -0.8 1,873,894 + CA264_08120 0.40 -1.7 1,873,964 - CA264_08120 0.49 -0.3 1,874,015 - CA264_08120 0.56 -0.6 1,874,019 + CA264_08120 0.56 -0.4 1,874,019 + CA264_08120 0.56 -0.7 1,874,020 - CA264_08120 0.57 -1.6 1,874,044 + CA264_08120 0.60 -0.9 1,874,162 + CA264_08120 0.76 -0.8 1,874,166 - CA264_08120 0.76 -0.1 1,874,240 + CA264_08120 0.86 -0.7 1,874,241 - CA264_08120 0.86 -0.7 1,874,285 - -1.0 1,874,346 - -0.3 1,874,368 + -0.3 1,874,390 - -1.3 1,874,426 - +0.1 1,874,476 + CA264_08125 0.20 -0.5 1,874,477 - CA264_08125 0.20 +0.4 1,874,479 - CA264_08125 0.21 -0.6 1,874,496 + CA264_08125 0.26 +0.8 1,874,563 - CA264_08125 0.46 -2.0 1,874,566 + CA264_08125 0.47 -0.2 1,874,575 - CA264_08125 0.50 -0.3 1,874,577 + CA264_08125 0.50 -0.4 1,874,577 + CA264_08125 0.50 -1.1 1,874,577 + CA264_08125 0.50 -0.4 1,874,593 + CA264_08125 0.55 -0.2 1,874,594 - CA264_08125 0.56 -0.3
Or see this region's nucleotide sequence