Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07295 and CA264_07300 are separated by 343 nucleotides CA264_07300 and CA264_07305 are separated by 201 nucleotides
CA264_07295: CA264_07295 - helix-turn-helix transcriptional regulator, at 1,685,707 to 1,686,402
_07295
CA264_07300: CA264_07300 - TIGR00374 family protein, at 1,686,746 to 1,687,858
_07300
CA264_07305: CA264_07305 - hypothetical protein, at 1,688,060 to 1,689,325
_07305
Position (kb)
1686
1687
1688 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1685.861 kb on - strand, within CA264_07295 at 1685.959 kb on + strand, within CA264_07295 at 1686.104 kb on + strand, within CA264_07295 at 1686.105 kb on - strand, within CA264_07295 at 1686.184 kb on + strand, within CA264_07295 at 1686.184 kb on + strand, within CA264_07295 at 1686.185 kb on - strand, within CA264_07295 at 1686.277 kb on - strand, within CA264_07295 at 1686.277 kb on - strand, within CA264_07295 at 1686.358 kb on + strand at 1686.390 kb on + strand at 1686.391 kb on - strand at 1686.395 kb on + strand at 1686.396 kb on - strand at 1686.401 kb on - strand at 1686.474 kb on + strand at 1686.497 kb on - strand at 1686.500 kb on + strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.501 kb on - strand at 1686.508 kb on - strand at 1686.511 kb on + strand at 1686.511 kb on + strand at 1686.511 kb on + strand at 1686.512 kb on - strand at 1686.512 kb on - strand at 1686.512 kb on - strand at 1686.573 kb on - strand at 1686.590 kb on - strand at 1686.592 kb on + strand at 1686.593 kb on - strand at 1686.604 kb on + strand at 1686.655 kb on - strand at 1686.659 kb on + strand at 1686.725 kb on - strand at 1686.795 kb on + strand at 1686.825 kb on + strand at 1686.842 kb on + strand at 1686.851 kb on + strand at 1686.941 kb on + strand, within CA264_07300 at 1686.941 kb on + strand, within CA264_07300 at 1686.943 kb on + strand, within CA264_07300 at 1686.943 kb on + strand, within CA264_07300 at 1686.943 kb on + strand, within CA264_07300 at 1686.947 kb on + strand, within CA264_07300 at 1686.948 kb on - strand, within CA264_07300 at 1686.978 kb on + strand, within CA264_07300 at 1686.979 kb on - strand, within CA264_07300 at 1686.979 kb on - strand, within CA264_07300 at 1686.998 kb on - strand, within CA264_07300 at 1687.003 kb on + strand, within CA264_07300 at 1687.007 kb on - strand, within CA264_07300 at 1687.007 kb on - strand, within CA264_07300 at 1687.007 kb on - strand, within CA264_07300 at 1687.070 kb on + strand, within CA264_07300 at 1687.071 kb on - strand, within CA264_07300 at 1687.071 kb on - strand, within CA264_07300 at 1687.142 kb on - strand, within CA264_07300 at 1687.146 kb on + strand, within CA264_07300 at 1687.146 kb on + strand, within CA264_07300 at 1687.148 kb on + strand, within CA264_07300 at 1687.184 kb on - strand, within CA264_07300 at 1687.219 kb on + strand, within CA264_07300 at 1687.301 kb on + strand, within CA264_07300 at 1687.302 kb on - strand, within CA264_07300 at 1687.444 kb on + strand, within CA264_07300 at 1687.451 kb on + strand, within CA264_07300 at 1687.479 kb on + strand, within CA264_07300 at 1687.505 kb on - strand, within CA264_07300 at 1687.561 kb on - strand, within CA264_07300 at 1687.718 kb on + strand, within CA264_07300 at 1687.718 kb on + strand, within CA264_07300 at 1687.718 kb on + strand, within CA264_07300 at 1687.729 kb on - strand, within CA264_07300 at 1687.729 kb on - strand, within CA264_07300 at 1687.734 kb on + strand, within CA264_07300 at 1687.744 kb on + strand, within CA264_07300 at 1687.745 kb on - strand, within CA264_07300 at 1687.825 kb on + strand at 1687.834 kb on + strand at 1687.855 kb on - strand at 1687.857 kb on - strand at 1687.921 kb on - strand at 1687.934 kb on - strand at 1687.979 kb on - strand at 1687.996 kb on - strand at 1687.996 kb on - strand at 1687.999 kb on + strand at 1688.000 kb on - strand at 1688.000 kb on - strand at 1688.081 kb on + strand at 1688.082 kb on - strand at 1688.082 kb on - strand at 1688.082 kb on - strand at 1688.124 kb on + strand at 1688.124 kb on + strand at 1688.124 kb on + strand at 1688.124 kb on + strand at 1688.124 kb on + strand at 1688.125 kb on - strand at 1688.125 kb on - strand at 1688.126 kb on + strand at 1688.257 kb on - strand, within CA264_07305 at 1688.311 kb on - strand, within CA264_07305 at 1688.448 kb on + strand, within CA264_07305 at 1688.449 kb on - strand, within CA264_07305 at 1688.449 kb on - strand, within CA264_07305 at 1688.490 kb on + strand, within CA264_07305 at 1688.491 kb on - strand, within CA264_07305 at 1688.611 kb on + strand, within CA264_07305 at 1688.628 kb on - strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305 at 1688.694 kb on + strand, within CA264_07305
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,685,861 - CA264_07295 0.22 +0.2 1,685,959 + CA264_07295 0.36 -0.6 1,686,104 + CA264_07295 0.57 +0.4 1,686,105 - CA264_07295 0.57 -0.8 1,686,184 + CA264_07295 0.69 -0.5 1,686,184 + CA264_07295 0.69 -0.7 1,686,185 - CA264_07295 0.69 -0.3 1,686,277 - CA264_07295 0.82 -1.3 1,686,277 - CA264_07295 0.82 -1.8 1,686,358 + -1.4 1,686,390 + +1.6 1,686,391 - +0.3 1,686,395 + +0.1 1,686,396 - -0.4 1,686,401 - -0.3 1,686,474 + -0.0 1,686,497 - -0.8 1,686,500 + +0.1 1,686,501 - -0.9 1,686,501 - -0.4 1,686,501 - +0.3 1,686,501 - -0.1 1,686,501 - +0.0 1,686,508 - -0.2 1,686,511 + -0.6 1,686,511 + -0.5 1,686,511 + +0.1 1,686,512 - +0.8 1,686,512 - -0.4 1,686,512 - +0.3 1,686,573 - -0.3 1,686,590 - -0.2 1,686,592 + -0.3 1,686,593 - +0.2 1,686,604 + -0.2 1,686,655 - +0.6 1,686,659 + -1.5 1,686,725 - +0.1 1,686,795 + -0.2 1,686,825 + -1.4 1,686,842 + -0.3 1,686,851 + -0.4 1,686,941 + CA264_07300 0.18 -1.3 1,686,941 + CA264_07300 0.18 -0.2 1,686,943 + CA264_07300 0.18 -0.5 1,686,943 + CA264_07300 0.18 -0.1 1,686,943 + CA264_07300 0.18 -0.5 1,686,947 + CA264_07300 0.18 -0.3 1,686,948 - CA264_07300 0.18 -0.1 1,686,978 + CA264_07300 0.21 -0.1 1,686,979 - CA264_07300 0.21 -0.4 1,686,979 - CA264_07300 0.21 +0.3 1,686,998 - CA264_07300 0.23 -0.1 1,687,003 + CA264_07300 0.23 -0.6 1,687,007 - CA264_07300 0.23 +0.1 1,687,007 - CA264_07300 0.23 -0.5 1,687,007 - CA264_07300 0.23 -1.3 1,687,070 + CA264_07300 0.29 +0.8 1,687,071 - CA264_07300 0.29 -0.6 1,687,071 - CA264_07300 0.29 -0.2 1,687,142 - CA264_07300 0.36 +0.3 1,687,146 + CA264_07300 0.36 -0.8 1,687,146 + CA264_07300 0.36 -1.0 1,687,148 + CA264_07300 0.36 -1.0 1,687,184 - CA264_07300 0.39 +0.1 1,687,219 + CA264_07300 0.42 +0.1 1,687,301 + CA264_07300 0.50 +0.2 1,687,302 - CA264_07300 0.50 -0.9 1,687,444 + CA264_07300 0.63 +0.1 1,687,451 + CA264_07300 0.63 +0.1 1,687,479 + CA264_07300 0.66 -0.7 1,687,505 - CA264_07300 0.68 -0.2 1,687,561 - CA264_07300 0.73 -0.8 1,687,718 + CA264_07300 0.87 -0.7 1,687,718 + CA264_07300 0.87 -0.4 1,687,718 + CA264_07300 0.87 -0.8 1,687,729 - CA264_07300 0.88 -0.2 1,687,729 - CA264_07300 0.88 +0.1 1,687,734 + CA264_07300 0.89 +0.6 1,687,744 + CA264_07300 0.90 -0.6 1,687,745 - CA264_07300 0.90 +0.1 1,687,825 + +0.7 1,687,834 + -0.1 1,687,855 - +0.3 1,687,857 - -0.0 1,687,921 - -0.2 1,687,934 - -0.4 1,687,979 - +0.4 1,687,996 - -0.2 1,687,996 - -0.1 1,687,999 + +0.1 1,688,000 - +0.4 1,688,000 - +0.0 1,688,081 + -0.4 1,688,082 - -0.2 1,688,082 - -0.4 1,688,082 - -0.2 1,688,124 + +0.1 1,688,124 + +0.2 1,688,124 + +0.7 1,688,124 + -0.6 1,688,124 + -1.3 1,688,125 - +0.3 1,688,125 - -1.0 1,688,126 + +0.5 1,688,257 - CA264_07305 0.16 -0.6 1,688,311 - CA264_07305 0.20 -0.2 1,688,448 + CA264_07305 0.31 -0.3 1,688,449 - CA264_07305 0.31 -3.0 1,688,449 - CA264_07305 0.31 -0.7 1,688,490 + CA264_07305 0.34 -1.8 1,688,491 - CA264_07305 0.34 -0.2 1,688,611 + CA264_07305 0.44 -0.5 1,688,628 - CA264_07305 0.45 -0.8 1,688,694 + CA264_07305 0.50 -0.1 1,688,694 + CA264_07305 0.50 +0.2 1,688,694 + CA264_07305 0.50 -0.6
Or see this region's nucleotide sequence