Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07145 and CA264_07150 are separated by 167 nucleotides CA264_07150 and CA264_07155 are separated by 711 nucleotides
CA264_07145: CA264_07145 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase, at 1,647,243 to 1,648,124
_07145
CA264_07150: CA264_07150 - elongation factor 4, at 1,648,292 to 1,650,076
_07150
CA264_07155: CA264_07155 - methylmalonyl-CoA mutase, at 1,650,788 to 1,654,174
_07155
Position (kb)
1648
1649
1650
1651 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1648.130 kb on + strand at 1648.131 kb on - strand at 1648.156 kb on - strand at 1648.156 kb on - strand at 1648.196 kb on + strand at 1648.205 kb on + strand at 1648.210 kb on + strand at 1648.210 kb on + strand at 1648.211 kb on - strand at 1648.211 kb on - strand at 1648.212 kb on + strand at 1648.212 kb on + strand at 1648.214 kb on + strand at 1648.226 kb on + strand at 1648.227 kb on - strand at 1648.227 kb on - strand at 1648.232 kb on + strand at 1648.233 kb on - strand at 1648.303 kb on + strand at 1648.347 kb on - strand at 1648.816 kb on + strand, within CA264_07150 at 1648.853 kb on - strand, within CA264_07150 at 1648.957 kb on + strand, within CA264_07150 at 1648.959 kb on + strand, within CA264_07150 at 1648.959 kb on + strand, within CA264_07150 at 1648.974 kb on - strand, within CA264_07150 at 1649.264 kb on - strand, within CA264_07150 at 1649.306 kb on - strand, within CA264_07150 at 1649.310 kb on + strand, within CA264_07150 at 1649.807 kb on - strand, within CA264_07150 at 1649.915 kb on - strand at 1650.029 kb on - strand at 1650.076 kb on + strand at 1650.080 kb on + strand at 1650.080 kb on + strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.171 kb on + strand at 1650.171 kb on + strand at 1650.171 kb on + strand at 1650.171 kb on + strand at 1650.172 kb on - strand at 1650.174 kb on - strand at 1650.249 kb on + strand at 1650.249 kb on + strand at 1650.250 kb on - strand at 1650.253 kb on + strand at 1650.275 kb on + strand at 1650.275 kb on + strand at 1650.364 kb on - strand at 1650.381 kb on - strand at 1650.458 kb on + strand at 1650.459 kb on - strand at 1650.467 kb on - strand at 1650.551 kb on + strand at 1650.642 kb on - strand at 1650.649 kb on - strand at 1650.649 kb on - strand at 1650.658 kb on - strand at 1650.682 kb on + strand at 1650.688 kb on + strand at 1650.688 kb on + strand at 1650.728 kb on + strand at 1650.729 kb on - strand at 1650.729 kb on - strand at 1650.729 kb on - strand at 1650.750 kb on + strand at 1650.751 kb on - strand at 1650.751 kb on - strand at 1650.751 kb on - strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.784 kb on - strand at 1650.785 kb on + strand at 1650.785 kb on + strand at 1650.785 kb on + strand at 1650.786 kb on - strand at 1650.800 kb on - strand at 1650.805 kb on - strand at 1650.805 kb on - strand at 1650.805 kb on - strand at 1650.812 kb on + strand at 1650.812 kb on + strand at 1650.812 kb on + strand at 1650.813 kb on - strand at 1650.823 kb on - strand at 1650.829 kb on + strand at 1650.829 kb on + strand at 1650.835 kb on + strand at 1650.841 kb on + strand at 1650.895 kb on + strand at 1650.900 kb on + strand at 1650.921 kb on + strand at 1650.922 kb on - strand at 1651.037 kb on + strand at 1651.038 kb on - strand at 1651.043 kb on + strand at 1651.044 kb on - strand at 1651.044 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,648,130 + -0.7 1,648,131 - -0.3 1,648,156 - -0.7 1,648,156 - +0.4 1,648,196 + -1.3 1,648,205 + -0.7 1,648,210 + -0.8 1,648,210 + -1.3 1,648,211 - -0.4 1,648,211 - -1.0 1,648,212 + -0.2 1,648,212 + -0.9 1,648,214 + -1.5 1,648,226 + -0.6 1,648,227 - +0.1 1,648,227 - -0.2 1,648,232 + +0.7 1,648,233 - +1.6 1,648,303 + +0.6 1,648,347 - -0.6 1,648,816 + CA264_07150 0.29 -1.4 1,648,853 - CA264_07150 0.31 -0.4 1,648,957 + CA264_07150 0.37 -0.4 1,648,959 + CA264_07150 0.37 -1.6 1,648,959 + CA264_07150 0.37 -0.5 1,648,974 - CA264_07150 0.38 +0.1 1,649,264 - CA264_07150 0.54 -1.1 1,649,306 - CA264_07150 0.57 +0.5 1,649,310 + CA264_07150 0.57 -0.7 1,649,807 - CA264_07150 0.85 -0.5 1,649,915 - -1.6 1,650,029 - -0.8 1,650,076 + +1.1 1,650,080 + -0.2 1,650,080 + +0.4 1,650,081 - +0.1 1,650,081 - -0.0 1,650,081 - -1.0 1,650,081 - +0.3 1,650,081 - +0.6 1,650,081 - +0.6 1,650,081 - -1.3 1,650,171 + -1.6 1,650,171 + +1.3 1,650,171 + +0.1 1,650,171 + -0.3 1,650,172 - +0.1 1,650,174 - -0.0 1,650,249 + -0.6 1,650,249 + -0.4 1,650,250 - -0.8 1,650,253 + +1.6 1,650,275 + +1.0 1,650,275 + +0.5 1,650,364 - +0.1 1,650,381 - +0.5 1,650,458 + -0.4 1,650,459 - +0.4 1,650,467 - +0.3 1,650,551 + +1.2 1,650,642 - +1.1 1,650,649 - -1.6 1,650,649 - +0.1 1,650,658 - +0.4 1,650,682 + +0.7 1,650,688 + -0.4 1,650,688 + +0.9 1,650,728 + -0.3 1,650,729 - +0.2 1,650,729 - -0.3 1,650,729 - -0.1 1,650,750 + +2.1 1,650,751 - -0.5 1,650,751 - -0.1 1,650,751 - +0.4 1,650,783 + -0.2 1,650,783 + -0.5 1,650,783 + -1.5 1,650,783 + -0.5 1,650,783 + -0.0 1,650,784 - -0.4 1,650,785 + -0.6 1,650,785 + -0.6 1,650,785 + +0.0 1,650,786 - -0.2 1,650,800 - -1.8 1,650,805 - +0.1 1,650,805 - +0.1 1,650,805 - -0.2 1,650,812 + -1.2 1,650,812 + +0.3 1,650,812 + -0.4 1,650,813 - -0.2 1,650,823 - -0.4 1,650,829 + -0.5 1,650,829 + +1.4 1,650,835 + +0.9 1,650,841 + +0.1 1,650,895 + +0.6 1,650,900 + +0.8 1,650,921 + +0.7 1,650,922 - -0.3 1,651,037 + -0.1 1,651,038 - -0.4 1,651,043 + +0.5 1,651,044 - -1.0 1,651,044 - -0.3
Or see this region's nucleotide sequence