Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07120 and CA264_07125 are separated by 152 nucleotides CA264_07125 and CA264_07130 are separated by 237 nucleotides CA264_07130 and CA264_07135 are separated by 9 nucleotides CA264_07135 and CA264_07140 are separated by 242 nucleotides
CA264_07120: CA264_07120 - citrate (Si)-synthase, at 1,641,138 to 1,642,424
_07120
CA264_07125: CA264_07125 - 6-carboxytetrahydropterin synthase QueD, at 1,642,577 to 1,643,026
_07125
CA264_07130: CA264_07130 - hypothetical protein, at 1,643,264 to 1,645,189
_07130
CA264_07135: CA264_07135 - 7-carboxy-7-deazaguanine synthase QueE, at 1,645,199 to 1,645,852
_07135
CA264_07140: CA264_07140 - hydroxyacid dehydrogenase, at 1,646,095 to 1,647,138
_07140
Position (kb)
1643
1644
1645
1646 Strain fitness (log2 ratio)
-2
-1
0
1 at 1642.402 kb on - strand at 1642.402 kb on - strand at 1642.409 kb on + strand at 1642.410 kb on - strand at 1642.435 kb on + strand at 1642.436 kb on - strand at 1642.438 kb on - strand at 1642.563 kb on + strand at 1642.564 kb on - strand at 1642.564 kb on - strand at 1642.570 kb on - strand at 1642.606 kb on + strand at 1642.637 kb on + strand, within CA264_07125 at 1642.638 kb on - strand, within CA264_07125 at 1642.638 kb on - strand, within CA264_07125 at 1642.673 kb on + strand, within CA264_07125 at 1642.673 kb on + strand, within CA264_07125 at 1642.673 kb on + strand, within CA264_07125 at 1642.687 kb on - strand, within CA264_07125 at 1642.758 kb on + strand, within CA264_07125 at 1642.785 kb on + strand, within CA264_07125 at 1642.785 kb on + strand, within CA264_07125 at 1642.883 kb on + strand, within CA264_07125 at 1642.953 kb on + strand, within CA264_07125 at 1642.954 kb on - strand, within CA264_07125 at 1642.954 kb on - strand, within CA264_07125 at 1642.968 kb on + strand, within CA264_07125 at 1643.007 kb on - strand at 1643.069 kb on + strand at 1643.085 kb on + strand at 1643.086 kb on - strand at 1643.092 kb on - strand at 1643.152 kb on - strand at 1643.156 kb on + strand at 1643.157 kb on - strand at 1643.188 kb on + strand at 1643.188 kb on + strand at 1643.188 kb on + strand at 1643.189 kb on - strand at 1643.189 kb on - strand at 1643.189 kb on - strand at 1643.197 kb on + strand at 1643.221 kb on - strand at 1643.231 kb on - strand at 1643.236 kb on + strand at 1643.265 kb on + strand at 1643.266 kb on - strand at 1643.266 kb on - strand at 1643.346 kb on + strand at 1643.347 kb on - strand at 1643.380 kb on + strand at 1643.381 kb on - strand at 1643.394 kb on + strand at 1643.506 kb on + strand, within CA264_07130 at 1643.506 kb on + strand, within CA264_07130 at 1643.554 kb on + strand, within CA264_07130 at 1643.555 kb on - strand, within CA264_07130 at 1643.556 kb on + strand, within CA264_07130 at 1643.622 kb on + strand, within CA264_07130 at 1643.623 kb on - strand, within CA264_07130 at 1643.663 kb on - strand, within CA264_07130 at 1643.710 kb on - strand, within CA264_07130 at 1643.719 kb on - strand, within CA264_07130 at 1643.749 kb on - strand, within CA264_07130 at 1643.749 kb on - strand, within CA264_07130 at 1643.808 kb on + strand, within CA264_07130 at 1643.808 kb on + strand, within CA264_07130 at 1643.871 kb on + strand, within CA264_07130 at 1643.872 kb on - strand, within CA264_07130 at 1643.875 kb on + strand, within CA264_07130 at 1643.875 kb on + strand, within CA264_07130 at 1643.876 kb on - strand, within CA264_07130 at 1643.919 kb on + strand, within CA264_07130 at 1643.919 kb on + strand, within CA264_07130 at 1643.920 kb on - strand, within CA264_07130 at 1643.927 kb on + strand, within CA264_07130 at 1643.928 kb on - strand, within CA264_07130 at 1643.928 kb on - strand, within CA264_07130 at 1643.928 kb on - strand, within CA264_07130 at 1643.929 kb on + strand, within CA264_07130 at 1643.929 kb on + strand, within CA264_07130 at 1643.929 kb on + strand, within CA264_07130 at 1643.929 kb on + strand, within CA264_07130 at 1643.930 kb on - strand, within CA264_07130 at 1643.930 kb on - strand, within CA264_07130 at 1643.930 kb on - strand, within CA264_07130 at 1643.967 kb on + strand, within CA264_07130 at 1644.091 kb on + strand, within CA264_07130 at 1644.132 kb on + strand, within CA264_07130 at 1644.133 kb on - strand, within CA264_07130 at 1644.135 kb on - strand, within CA264_07130 at 1644.240 kb on + strand, within CA264_07130 at 1644.240 kb on + strand, within CA264_07130 at 1644.262 kb on + strand, within CA264_07130 at 1644.262 kb on + strand, within CA264_07130 at 1644.284 kb on - strand, within CA264_07130 at 1644.284 kb on - strand, within CA264_07130 at 1644.289 kb on + strand, within CA264_07130 at 1644.289 kb on + strand, within CA264_07130 at 1644.294 kb on + strand, within CA264_07130 at 1644.295 kb on - strand, within CA264_07130 at 1644.358 kb on + strand, within CA264_07130 at 1644.359 kb on - strand, within CA264_07130 at 1644.408 kb on + strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.409 kb on - strand, within CA264_07130 at 1644.515 kb on - strand, within CA264_07130 at 1644.570 kb on + strand, within CA264_07130 at 1644.616 kb on - strand, within CA264_07130 at 1644.616 kb on - strand, within CA264_07130 at 1644.619 kb on + strand, within CA264_07130 at 1644.619 kb on + strand, within CA264_07130 at 1644.620 kb on - strand, within CA264_07130 at 1644.643 kb on + strand, within CA264_07130 at 1644.643 kb on + strand, within CA264_07130 at 1644.644 kb on - strand, within CA264_07130 at 1644.749 kb on - strand, within CA264_07130 at 1644.813 kb on + strand, within CA264_07130 at 1644.834 kb on + strand, within CA264_07130 at 1644.946 kb on + strand, within CA264_07130 at 1644.947 kb on - strand, within CA264_07130 at 1644.985 kb on - strand, within CA264_07130 at 1645.066 kb on - strand at 1645.066 kb on - strand at 1645.109 kb on - strand at 1645.136 kb on - strand at 1645.147 kb on + strand at 1645.172 kb on - strand at 1645.183 kb on + strand at 1645.184 kb on - strand at 1645.184 kb on - strand at 1645.185 kb on + strand at 1645.185 kb on + strand at 1645.185 kb on + strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.186 kb on - strand at 1645.215 kb on + strand at 1645.215 kb on + strand at 1645.216 kb on - strand at 1645.253 kb on - strand at 1645.264 kb on - strand at 1645.318 kb on - strand, within CA264_07135 at 1645.397 kb on + strand, within CA264_07135 at 1645.397 kb on + strand, within CA264_07135 at 1645.398 kb on - strand, within CA264_07135 at 1645.419 kb on - strand, within CA264_07135 at 1645.419 kb on - strand, within CA264_07135 at 1645.489 kb on - strand, within CA264_07135 at 1645.560 kb on + strand, within CA264_07135 at 1645.889 kb on + strand at 1645.904 kb on - strand at 1645.904 kb on - strand at 1645.904 kb on - strand at 1645.958 kb on + strand at 1646.022 kb on + strand at 1646.040 kb on - strand at 1646.056 kb on - strand at 1646.096 kb on + strand at 1646.096 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,642,402 - +0.9 1,642,402 - -0.4 1,642,409 + -0.4 1,642,410 - -0.5 1,642,435 + -0.6 1,642,436 - +0.0 1,642,438 - -0.6 1,642,563 + -0.8 1,642,564 - +0.1 1,642,564 - +0.1 1,642,570 - +0.3 1,642,606 + -0.0 1,642,637 + CA264_07125 0.13 -0.5 1,642,638 - CA264_07125 0.14 -0.4 1,642,638 - CA264_07125 0.14 -0.9 1,642,673 + CA264_07125 0.21 +0.6 1,642,673 + CA264_07125 0.21 +0.7 1,642,673 + CA264_07125 0.21 -0.7 1,642,687 - CA264_07125 0.24 -0.6 1,642,758 + CA264_07125 0.40 -0.4 1,642,785 + CA264_07125 0.46 -0.3 1,642,785 + CA264_07125 0.46 -0.4 1,642,883 + CA264_07125 0.68 -0.1 1,642,953 + CA264_07125 0.84 +0.6 1,642,954 - CA264_07125 0.84 -0.4 1,642,954 - CA264_07125 0.84 -0.4 1,642,968 + CA264_07125 0.87 -1.4 1,643,007 - -0.4 1,643,069 + -0.3 1,643,085 + +1.1 1,643,086 - +0.3 1,643,092 - +0.2 1,643,152 - -2.1 1,643,156 + +0.5 1,643,157 - -0.1 1,643,188 + +0.2 1,643,188 + -0.8 1,643,188 + +0.2 1,643,189 - -0.5 1,643,189 - -0.9 1,643,189 - -0.1 1,643,197 + -0.2 1,643,221 - +1.2 1,643,231 - +0.3 1,643,236 + -0.4 1,643,265 + -0.7 1,643,266 - +0.1 1,643,266 - -0.8 1,643,346 + -2.1 1,643,347 - -0.7 1,643,380 + -1.3 1,643,381 - -0.3 1,643,394 + -1.9 1,643,506 + CA264_07130 0.13 -0.2 1,643,506 + CA264_07130 0.13 -0.3 1,643,554 + CA264_07130 0.15 +0.8 1,643,555 - CA264_07130 0.15 -0.3 1,643,556 + CA264_07130 0.15 -0.6 1,643,622 + CA264_07130 0.19 -0.4 1,643,623 - CA264_07130 0.19 -0.0 1,643,663 - CA264_07130 0.21 -1.1 1,643,710 - CA264_07130 0.23 -0.1 1,643,719 - CA264_07130 0.24 +0.1 1,643,749 - CA264_07130 0.25 +0.1 1,643,749 - CA264_07130 0.25 -0.1 1,643,808 + CA264_07130 0.28 +0.2 1,643,808 + CA264_07130 0.28 -1.2 1,643,871 + CA264_07130 0.32 +0.8 1,643,872 - CA264_07130 0.32 +0.1 1,643,875 + CA264_07130 0.32 -0.7 1,643,875 + CA264_07130 0.32 +0.8 1,643,876 - CA264_07130 0.32 -1.1 1,643,919 + CA264_07130 0.34 -0.2 1,643,919 + CA264_07130 0.34 -2.1 1,643,920 - CA264_07130 0.34 -0.1 1,643,927 + CA264_07130 0.34 +0.6 1,643,928 - CA264_07130 0.34 +0.5 1,643,928 - CA264_07130 0.34 -0.1 1,643,928 - CA264_07130 0.34 -0.6 1,643,929 + CA264_07130 0.35 +0.4 1,643,929 + CA264_07130 0.35 +0.3 1,643,929 + CA264_07130 0.35 +0.0 1,643,929 + CA264_07130 0.35 -0.8 1,643,930 - CA264_07130 0.35 -1.2 1,643,930 - CA264_07130 0.35 -0.8 1,643,930 - CA264_07130 0.35 +0.2 1,643,967 + CA264_07130 0.37 -0.8 1,644,091 + CA264_07130 0.43 -0.0 1,644,132 + CA264_07130 0.45 -0.7 1,644,133 - CA264_07130 0.45 -0.2 1,644,135 - CA264_07130 0.45 +0.2 1,644,240 + CA264_07130 0.51 -0.1 1,644,240 + CA264_07130 0.51 -0.3 1,644,262 + CA264_07130 0.52 -0.6 1,644,262 + CA264_07130 0.52 -1.0 1,644,284 - CA264_07130 0.53 -0.4 1,644,284 - CA264_07130 0.53 -0.5 1,644,289 + CA264_07130 0.53 -0.8 1,644,289 + CA264_07130 0.53 -0.1 1,644,294 + CA264_07130 0.53 +0.7 1,644,295 - CA264_07130 0.54 -0.7 1,644,358 + CA264_07130 0.57 -1.1 1,644,359 - CA264_07130 0.57 -1.7 1,644,408 + CA264_07130 0.59 -0.4 1,644,409 - CA264_07130 0.59 -0.8 1,644,409 - CA264_07130 0.59 +0.2 1,644,409 - CA264_07130 0.59 -1.5 1,644,515 - CA264_07130 0.65 -0.8 1,644,570 + CA264_07130 0.68 -0.6 1,644,616 - CA264_07130 0.70 +0.4 1,644,616 - CA264_07130 0.70 +0.8 1,644,619 + CA264_07130 0.70 -0.4 1,644,619 + CA264_07130 0.70 -1.1 1,644,620 - CA264_07130 0.70 -0.7 1,644,643 + CA264_07130 0.72 +0.1 1,644,643 + CA264_07130 0.72 -0.2 1,644,644 - CA264_07130 0.72 -0.8 1,644,749 - CA264_07130 0.77 -0.1 1,644,813 + CA264_07130 0.80 -0.6 1,644,834 + CA264_07130 0.82 -0.2 1,644,946 + CA264_07130 0.87 +0.2 1,644,947 - CA264_07130 0.87 -0.1 1,644,985 - CA264_07130 0.89 -0.1 1,645,066 - -0.4 1,645,066 - +0.6 1,645,109 - -0.8 1,645,136 - +0.1 1,645,147 + -0.1 1,645,172 - -0.4 1,645,183 + +1.1 1,645,184 - -0.3 1,645,184 - +0.6 1,645,185 + -0.4 1,645,185 + -0.5 1,645,185 + -0.4 1,645,186 - -0.7 1,645,186 - -1.0 1,645,186 - -0.3 1,645,186 - +1.1 1,645,186 - +0.2 1,645,186 - -1.3 1,645,215 + +0.1 1,645,215 + -2.1 1,645,216 - -0.3 1,645,253 - -0.3 1,645,264 - -0.5 1,645,318 - CA264_07135 0.18 -0.4 1,645,397 + CA264_07135 0.30 -0.5 1,645,397 + CA264_07135 0.30 -0.8 1,645,398 - CA264_07135 0.30 +0.1 1,645,419 - CA264_07135 0.34 -0.2 1,645,419 - CA264_07135 0.34 -1.9 1,645,489 - CA264_07135 0.44 -0.3 1,645,560 + CA264_07135 0.55 -0.4 1,645,889 + -0.9 1,645,904 - +0.5 1,645,904 - -0.4 1,645,904 - +0.5 1,645,958 + +0.6 1,646,022 + +0.1 1,646,040 - -0.1 1,646,056 - +0.9 1,646,096 + +0.4 1,646,096 + +1.1
Or see this region's nucleotide sequence