Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05770 and CA264_05775 overlap by 4 nucleotides CA264_05775 and CA264_05780 are separated by 105 nucleotides
CA264_05770: CA264_05770 - cytochrome c class i, at 1,343,141 to 1,344,343
_05770
CA264_05775: CA264_05775 - hypothetical protein, at 1,344,340 to 1,344,534
_05775
CA264_05780: CA264_05780 - cytochrome C oxidase Cbb3, at 1,344,640 to 1,346,832
_05780
Position (kb)
1344
1345 Strain fitness (log2 ratio)
-2
-1
0
1 at 1343.351 kb on + strand, within CA264_05770 at 1343.521 kb on - strand, within CA264_05770 at 1343.569 kb on + strand, within CA264_05770 at 1343.570 kb on - strand, within CA264_05770 at 1343.571 kb on + strand, within CA264_05770 at 1343.571 kb on + strand, within CA264_05770 at 1343.571 kb on + strand, within CA264_05770 at 1343.571 kb on + strand, within CA264_05770 at 1343.572 kb on - strand, within CA264_05770 at 1343.585 kb on + strand, within CA264_05770 at 1343.599 kb on - strand, within CA264_05770 at 1343.696 kb on + strand, within CA264_05770 at 1343.792 kb on - strand, within CA264_05770 at 1343.992 kb on - strand, within CA264_05770 at 1344.000 kb on - strand, within CA264_05770 at 1344.000 kb on - strand, within CA264_05770 at 1344.009 kb on - strand, within CA264_05770 at 1344.060 kb on + strand, within CA264_05770 at 1344.060 kb on + strand, within CA264_05770 at 1344.245 kb on + strand at 1344.349 kb on + strand at 1344.364 kb on - strand, within CA264_05775 at 1344.434 kb on - strand, within CA264_05775 at 1344.434 kb on - strand, within CA264_05775 at 1344.437 kb on + strand, within CA264_05775 at 1344.438 kb on - strand, within CA264_05775 at 1344.492 kb on - strand, within CA264_05775 at 1344.494 kb on - strand, within CA264_05775 at 1344.508 kb on + strand, within CA264_05775 at 1344.508 kb on + strand, within CA264_05775 at 1344.509 kb on - strand, within CA264_05775 at 1344.509 kb on - strand, within CA264_05775 at 1344.528 kb on + strand at 1344.529 kb on - strand at 1344.531 kb on - strand at 1344.541 kb on + strand at 1344.541 kb on + strand at 1344.542 kb on - strand at 1344.559 kb on - strand at 1344.587 kb on + strand at 1344.588 kb on - strand at 1344.647 kb on - strand at 1344.806 kb on + strand at 1344.806 kb on + strand at 1344.953 kb on + strand, within CA264_05780 at 1345.061 kb on + strand at 1345.062 kb on - strand, within CA264_05780 at 1345.120 kb on - strand, within CA264_05780 at 1345.140 kb on - strand, within CA264_05780 at 1345.170 kb on + strand, within CA264_05780 at 1345.227 kb on + strand, within CA264_05780 at 1345.343 kb on - strand, within CA264_05780 at 1345.410 kb on - strand, within CA264_05780 at 1345.463 kb on + strand, within CA264_05780 at 1345.463 kb on + strand, within CA264_05780 at 1345.463 kb on + strand, within CA264_05780 at 1345.464 kb on - strand, within CA264_05780 at 1345.464 kb on - strand, within CA264_05780 at 1345.466 kb on + strand, within CA264_05780 at 1345.503 kb on + strand, within CA264_05780
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,343,351 + CA264_05770 0.17 +0.9 1,343,521 - CA264_05770 0.32 -0.5 1,343,569 + CA264_05770 0.36 -1.2 1,343,570 - CA264_05770 0.36 -1.5 1,343,571 + CA264_05770 0.36 -1.3 1,343,571 + CA264_05770 0.36 -1.8 1,343,571 + CA264_05770 0.36 -0.3 1,343,571 + CA264_05770 0.36 -0.5 1,343,572 - CA264_05770 0.36 -0.2 1,343,585 + CA264_05770 0.37 -1.5 1,343,599 - CA264_05770 0.38 -0.7 1,343,696 + CA264_05770 0.46 +0.0 1,343,792 - CA264_05770 0.54 -0.3 1,343,992 - CA264_05770 0.71 -1.1 1,344,000 - CA264_05770 0.71 -1.7 1,344,000 - CA264_05770 0.71 -0.2 1,344,009 - CA264_05770 0.72 +1.5 1,344,060 + CA264_05770 0.76 -0.9 1,344,060 + CA264_05770 0.76 -0.9 1,344,245 + -0.2 1,344,349 + -0.5 1,344,364 - CA264_05775 0.12 -0.3 1,344,434 - CA264_05775 0.48 -1.1 1,344,434 - CA264_05775 0.48 -0.2 1,344,437 + CA264_05775 0.50 -1.4 1,344,438 - CA264_05775 0.50 -0.8 1,344,492 - CA264_05775 0.78 -0.8 1,344,494 - CA264_05775 0.79 -0.2 1,344,508 + CA264_05775 0.86 -1.7 1,344,508 + CA264_05775 0.86 -1.5 1,344,509 - CA264_05775 0.87 -0.4 1,344,509 - CA264_05775 0.87 -1.1 1,344,528 + -2.5 1,344,529 - -1.7 1,344,531 - -0.7 1,344,541 + -1.8 1,344,541 + +0.1 1,344,542 - +0.0 1,344,559 - +0.3 1,344,587 + -0.3 1,344,588 - -0.1 1,344,647 - -0.1 1,344,806 + -1.0 1,344,806 + -0.9 1,344,953 + CA264_05780 0.14 +0.1 1,345,061 + +0.3 1,345,062 - CA264_05780 0.19 -0.4 1,345,120 - CA264_05780 0.22 -1.5 1,345,140 - CA264_05780 0.23 -0.8 1,345,170 + CA264_05780 0.24 -0.3 1,345,227 + CA264_05780 0.27 -0.0 1,345,343 - CA264_05780 0.32 +1.5 1,345,410 - CA264_05780 0.35 -1.5 1,345,463 + CA264_05780 0.38 +0.1 1,345,463 + CA264_05780 0.38 -1.5 1,345,463 + CA264_05780 0.38 +0.5 1,345,464 - CA264_05780 0.38 -0.4 1,345,464 - CA264_05780 0.38 +0.6 1,345,466 + CA264_05780 0.38 +0.0 1,345,503 + CA264_05780 0.39 -0.8
Or see this region's nucleotide sequence