Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05180 and CA264_05185 are separated by 133 nucleotides CA264_05185 and CA264_05190 are separated by 180 nucleotides
CA264_05180: CA264_05180 - hypothetical protein, at 1,202,246 to 1,203,079
_05180
CA264_05185: CA264_05185 - hypothetical protein, at 1,203,213 to 1,203,992
_05185
CA264_05190: CA264_05190 - hypothetical protein, at 1,204,173 to 1,206,377
_05190
Position (kb)
1203
1204 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1202.227 kb on - strand at 1202.245 kb on + strand at 1202.245 kb on + strand at 1202.246 kb on - strand at 1202.246 kb on - strand at 1202.262 kb on - strand at 1202.293 kb on - strand at 1202.372 kb on + strand, within CA264_05180 at 1202.372 kb on + strand, within CA264_05180 at 1202.373 kb on - strand, within CA264_05180 at 1202.444 kb on + strand, within CA264_05180 at 1202.470 kb on + strand, within CA264_05180 at 1202.470 kb on + strand, within CA264_05180 at 1202.478 kb on - strand, within CA264_05180 at 1202.498 kb on + strand, within CA264_05180 at 1202.498 kb on + strand, within CA264_05180 at 1202.499 kb on - strand, within CA264_05180 at 1202.499 kb on - strand, within CA264_05180 at 1202.499 kb on - strand, within CA264_05180 at 1202.518 kb on + strand, within CA264_05180 at 1202.518 kb on + strand, within CA264_05180 at 1202.519 kb on - strand, within CA264_05180 at 1202.519 kb on - strand, within CA264_05180 at 1202.519 kb on - strand, within CA264_05180 at 1202.519 kb on - strand, within CA264_05180 at 1202.519 kb on - strand, within CA264_05180 at 1202.522 kb on + strand, within CA264_05180 at 1202.522 kb on + strand, within CA264_05180 at 1202.523 kb on - strand, within CA264_05180 at 1202.532 kb on + strand, within CA264_05180 at 1202.580 kb on - strand, within CA264_05180 at 1202.625 kb on - strand, within CA264_05180 at 1202.735 kb on + strand, within CA264_05180 at 1202.865 kb on + strand, within CA264_05180 at 1202.883 kb on + strand, within CA264_05180 at 1202.883 kb on + strand, within CA264_05180 at 1202.883 kb on + strand, within CA264_05180 at 1202.883 kb on + strand, within CA264_05180 at 1202.884 kb on - strand, within CA264_05180 at 1202.884 kb on - strand, within CA264_05180 at 1202.884 kb on - strand, within CA264_05180 at 1202.884 kb on - strand, within CA264_05180 at 1202.885 kb on + strand, within CA264_05180 at 1202.886 kb on - strand, within CA264_05180 at 1202.886 kb on - strand, within CA264_05180 at 1202.913 kb on + strand, within CA264_05180 at 1202.913 kb on + strand, within CA264_05180 at 1202.914 kb on - strand, within CA264_05180 at 1202.914 kb on - strand, within CA264_05180 at 1202.914 kb on - strand, within CA264_05180 at 1202.914 kb on - strand, within CA264_05180 at 1202.914 kb on - strand, within CA264_05180 at 1202.914 kb on - strand, within CA264_05180 at 1202.995 kb on + strand, within CA264_05180 at 1203.006 kb on - strand at 1203.053 kb on - strand at 1203.094 kb on + strand at 1203.095 kb on - strand at 1203.116 kb on - strand at 1203.117 kb on + strand at 1203.117 kb on + strand at 1203.118 kb on - strand at 1203.118 kb on - strand at 1203.197 kb on + strand at 1203.242 kb on - strand at 1203.292 kb on + strand, within CA264_05185 at 1203.292 kb on + strand, within CA264_05185 at 1203.344 kb on - strand, within CA264_05185 at 1203.375 kb on + strand, within CA264_05185 at 1203.436 kb on - strand, within CA264_05185 at 1203.487 kb on + strand, within CA264_05185 at 1203.497 kb on + strand, within CA264_05185 at 1203.498 kb on - strand at 1203.503 kb on - strand, within CA264_05185 at 1203.559 kb on + strand, within CA264_05185 at 1203.582 kb on - strand, within CA264_05185 at 1203.781 kb on + strand, within CA264_05185 at 1203.782 kb on - strand, within CA264_05185 at 1203.968 kb on - strand at 1203.973 kb on + strand at 1203.985 kb on + strand at 1203.991 kb on - strand at 1203.991 kb on - strand at 1203.995 kb on + strand at 1203.996 kb on - strand at 1204.017 kb on - strand at 1204.139 kb on + strand at 1204.140 kb on - strand at 1204.236 kb on + strand at 1204.333 kb on - strand at 1204.464 kb on - strand, within CA264_05190 at 1204.469 kb on + strand, within CA264_05190 at 1204.539 kb on + strand, within CA264_05190 at 1204.823 kb on - strand, within CA264_05190
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,202,227 - -0.6 1,202,245 + +0.9 1,202,245 + -0.1 1,202,246 - +0.7 1,202,246 - +0.3 1,202,262 - -1.0 1,202,293 - -0.2 1,202,372 + CA264_05180 0.15 -0.5 1,202,372 + CA264_05180 0.15 +0.3 1,202,373 - CA264_05180 0.15 -0.0 1,202,444 + CA264_05180 0.24 -0.1 1,202,470 + CA264_05180 0.27 -1.0 1,202,470 + CA264_05180 0.27 -0.2 1,202,478 - CA264_05180 0.28 -0.2 1,202,498 + CA264_05180 0.30 -0.1 1,202,498 + CA264_05180 0.30 +0.2 1,202,499 - CA264_05180 0.30 +0.6 1,202,499 - CA264_05180 0.30 +0.0 1,202,499 - CA264_05180 0.30 -0.5 1,202,518 + CA264_05180 0.33 +0.2 1,202,518 + CA264_05180 0.33 -0.5 1,202,519 - CA264_05180 0.33 +0.8 1,202,519 - CA264_05180 0.33 -0.2 1,202,519 - CA264_05180 0.33 -0.5 1,202,519 - CA264_05180 0.33 +0.2 1,202,519 - CA264_05180 0.33 -0.5 1,202,522 + CA264_05180 0.33 -1.2 1,202,522 + CA264_05180 0.33 -0.2 1,202,523 - CA264_05180 0.33 -0.6 1,202,532 + CA264_05180 0.34 -0.1 1,202,580 - CA264_05180 0.40 -0.1 1,202,625 - CA264_05180 0.45 -0.6 1,202,735 + CA264_05180 0.59 -0.3 1,202,865 + CA264_05180 0.74 -0.5 1,202,883 + CA264_05180 0.76 -0.6 1,202,883 + CA264_05180 0.76 -0.3 1,202,883 + CA264_05180 0.76 +0.2 1,202,883 + CA264_05180 0.76 -0.2 1,202,884 - CA264_05180 0.76 +2.8 1,202,884 - CA264_05180 0.76 +0.3 1,202,884 - CA264_05180 0.76 +0.4 1,202,884 - CA264_05180 0.76 -0.3 1,202,885 + CA264_05180 0.77 -1.0 1,202,886 - CA264_05180 0.77 -0.4 1,202,886 - CA264_05180 0.77 -0.5 1,202,913 + CA264_05180 0.80 +0.4 1,202,913 + CA264_05180 0.80 +0.2 1,202,914 - CA264_05180 0.80 +1.0 1,202,914 - CA264_05180 0.80 -0.4 1,202,914 - CA264_05180 0.80 -0.3 1,202,914 - CA264_05180 0.80 -0.3 1,202,914 - CA264_05180 0.80 +0.3 1,202,914 - CA264_05180 0.80 +0.5 1,202,995 + CA264_05180 0.90 -0.9 1,203,006 - +0.2 1,203,053 - +0.4 1,203,094 + +0.4 1,203,095 - +0.7 1,203,116 - +0.1 1,203,117 + +0.1 1,203,117 + -0.4 1,203,118 - +1.6 1,203,118 - +0.3 1,203,197 + -0.4 1,203,242 - -3.0 1,203,292 + CA264_05185 0.10 -0.2 1,203,292 + CA264_05185 0.10 +0.6 1,203,344 - CA264_05185 0.17 -1.3 1,203,375 + CA264_05185 0.21 -2.0 1,203,436 - CA264_05185 0.29 -1.1 1,203,487 + CA264_05185 0.35 -1.4 1,203,497 + CA264_05185 0.36 -0.5 1,203,498 - +0.6 1,203,503 - CA264_05185 0.37 +0.0 1,203,559 + CA264_05185 0.44 -1.3 1,203,582 - CA264_05185 0.47 -1.2 1,203,781 + CA264_05185 0.73 -0.3 1,203,782 - CA264_05185 0.73 -0.5 1,203,968 - +0.2 1,203,973 + -1.2 1,203,985 + -0.4 1,203,991 - +0.5 1,203,991 - +0.3 1,203,995 + -0.4 1,203,996 - +0.0 1,204,017 - -2.1 1,204,139 + -1.0 1,204,140 - +1.5 1,204,236 + +0.0 1,204,333 - -0.8 1,204,464 - CA264_05190 0.13 +0.4 1,204,469 + CA264_05190 0.13 +0.2 1,204,539 + CA264_05190 0.17 -0.6 1,204,823 - CA264_05190 0.29 -1.9
Or see this region's nucleotide sequence