Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04935 and CA264_04940 are separated by 33 nucleotides CA264_04940 and CA264_04945 are separated by 4 nucleotides
CA264_04935: CA264_04935 - hypothetical protein, at 1,145,234 to 1,148,374
_04935
CA264_04940: CA264_04940 - hypothetical protein, at 1,148,408 to 1,150,102
_04940
CA264_04945: CA264_04945 - sporulation protein, at 1,150,107 to 1,151,270
_04945
Position (kb)
1148
1149
1150
1151 Strain fitness (log2 ratio)
-2
-1
0
1 at 1147.692 kb on - strand, within CA264_04935 at 1147.710 kb on - strand, within CA264_04935 at 1147.712 kb on + strand, within CA264_04935 at 1147.712 kb on + strand, within CA264_04935 at 1147.712 kb on + strand, within CA264_04935 at 1148.024 kb on + strand, within CA264_04935 at 1148.026 kb on + strand, within CA264_04935 at 1148.161 kb on + strand at 1148.172 kb on + strand at 1148.301 kb on + strand at 1148.373 kb on - strand at 1148.404 kb on + strand at 1148.417 kb on - strand at 1148.671 kb on - strand, within CA264_04940 at 1148.814 kb on - strand, within CA264_04940 at 1148.860 kb on + strand, within CA264_04940 at 1149.440 kb on - strand, within CA264_04940 at 1149.876 kb on - strand, within CA264_04940 at 1150.103 kb on + strand at 1150.127 kb on + strand at 1150.127 kb on + strand at 1150.128 kb on - strand at 1150.143 kb on + strand at 1150.226 kb on + strand, within CA264_04945 at 1150.227 kb on - strand, within CA264_04945 at 1150.299 kb on - strand, within CA264_04945 at 1150.429 kb on - strand, within CA264_04945 at 1150.429 kb on - strand, within CA264_04945 at 1150.458 kb on + strand, within CA264_04945 at 1150.472 kb on + strand, within CA264_04945 at 1150.472 kb on + strand, within CA264_04945 at 1150.475 kb on + strand, within CA264_04945 at 1150.476 kb on - strand, within CA264_04945 at 1150.476 kb on - strand, within CA264_04945 at 1150.522 kb on + strand, within CA264_04945 at 1150.522 kb on + strand, within CA264_04945 at 1150.528 kb on + strand, within CA264_04945 at 1150.623 kb on + strand, within CA264_04945 at 1150.623 kb on + strand, within CA264_04945 at 1150.624 kb on - strand, within CA264_04945 at 1150.699 kb on - strand, within CA264_04945 at 1150.789 kb on - strand, within CA264_04945 at 1150.824 kb on + strand, within CA264_04945 at 1150.824 kb on + strand, within CA264_04945 at 1150.825 kb on - strand, within CA264_04945 at 1150.893 kb on + strand, within CA264_04945 at 1150.970 kb on + strand, within CA264_04945 at 1151.003 kb on - strand, within CA264_04945 at 1151.052 kb on + strand, within CA264_04945 at 1151.061 kb on - strand, within CA264_04945
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,147,692 - CA264_04935 0.78 -0.8 1,147,710 - CA264_04935 0.79 -0.8 1,147,712 + CA264_04935 0.79 -0.8 1,147,712 + CA264_04935 0.79 +0.0 1,147,712 + CA264_04935 0.79 -0.1 1,148,024 + CA264_04935 0.89 +0.0 1,148,026 + CA264_04935 0.89 +1.2 1,148,161 + -1.3 1,148,172 + +1.6 1,148,301 + -0.7 1,148,373 - -0.3 1,148,404 + -0.2 1,148,417 - -0.6 1,148,671 - CA264_04940 0.16 -1.8 1,148,814 - CA264_04940 0.24 -1.2 1,148,860 + CA264_04940 0.27 -0.2 1,149,440 - CA264_04940 0.61 -1.2 1,149,876 - CA264_04940 0.87 +0.0 1,150,103 + -1.4 1,150,127 + -0.3 1,150,127 + -1.2 1,150,128 - -0.3 1,150,143 + -0.1 1,150,226 + CA264_04945 0.10 -0.5 1,150,227 - CA264_04945 0.10 +1.0 1,150,299 - CA264_04945 0.16 -0.2 1,150,429 - CA264_04945 0.28 +0.1 1,150,429 - CA264_04945 0.28 -0.8 1,150,458 + CA264_04945 0.30 -0.7 1,150,472 + CA264_04945 0.31 +0.2 1,150,472 + CA264_04945 0.31 -0.4 1,150,475 + CA264_04945 0.32 +0.6 1,150,476 - CA264_04945 0.32 -1.9 1,150,476 - CA264_04945 0.32 +0.3 1,150,522 + CA264_04945 0.36 -0.4 1,150,522 + CA264_04945 0.36 -0.5 1,150,528 + CA264_04945 0.36 +0.4 1,150,623 + CA264_04945 0.44 -1.4 1,150,623 + CA264_04945 0.44 +0.9 1,150,624 - CA264_04945 0.44 -0.6 1,150,699 - CA264_04945 0.51 +0.3 1,150,789 - CA264_04945 0.59 -0.4 1,150,824 + CA264_04945 0.62 -2.6 1,150,824 + CA264_04945 0.62 -0.6 1,150,825 - CA264_04945 0.62 -0.4 1,150,893 + CA264_04945 0.68 +0.5 1,150,970 + CA264_04945 0.74 -0.3 1,151,003 - CA264_04945 0.77 +0.1 1,151,052 + CA264_04945 0.81 -0.0 1,151,061 - CA264_04945 0.82 -0.4
Or see this region's nucleotide sequence