Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04930 and CA264_04935 are separated by 232 nucleotides CA264_04935 and CA264_04940 are separated by 33 nucleotides
CA264_04930: CA264_04930 - DNA polymerase III subunit delta, at 1,143,955 to 1,145,001
_04930
CA264_04935: CA264_04935 - hypothetical protein, at 1,145,234 to 1,148,374
_04935
CA264_04940: CA264_04940 - hypothetical protein, at 1,148,408 to 1,150,102
_04940
Position (kb)
1145
1146
1147
1148
1149 Strain fitness (log2 ratio)
-2
-1
0
1 at 1145.011 kb on + strand at 1145.015 kb on + strand at 1145.015 kb on + strand at 1145.016 kb on - strand at 1145.053 kb on + strand at 1145.054 kb on - strand at 1145.054 kb on - strand at 1145.054 kb on - strand at 1145.054 kb on - strand at 1145.055 kb on + strand at 1145.069 kb on + strand at 1145.069 kb on + strand at 1145.089 kb on - strand at 1145.129 kb on + strand at 1145.130 kb on - strand at 1145.178 kb on + strand at 1145.178 kb on + strand at 1145.179 kb on - strand at 1145.191 kb on - strand at 1145.229 kb on + strand at 1145.230 kb on - strand at 1145.234 kb on - strand at 1145.241 kb on + strand at 1145.923 kb on + strand, within CA264_04935 at 1146.065 kb on + strand, within CA264_04935 at 1147.692 kb on - strand, within CA264_04935 at 1147.710 kb on - strand, within CA264_04935 at 1147.712 kb on + strand, within CA264_04935 at 1147.712 kb on + strand, within CA264_04935 at 1147.712 kb on + strand, within CA264_04935 at 1148.024 kb on + strand, within CA264_04935 at 1148.026 kb on + strand, within CA264_04935 at 1148.161 kb on + strand at 1148.172 kb on + strand at 1148.301 kb on + strand at 1148.373 kb on - strand at 1148.404 kb on + strand at 1148.417 kb on - strand at 1148.671 kb on - strand, within CA264_04940 at 1148.814 kb on - strand, within CA264_04940 at 1148.860 kb on + strand, within CA264_04940
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,145,011 + -0.6 1,145,015 + -0.4 1,145,015 + +1.2 1,145,016 - -0.6 1,145,053 + -0.2 1,145,054 - -0.1 1,145,054 - -0.9 1,145,054 - -1.6 1,145,054 - -0.2 1,145,055 + -0.9 1,145,069 + -0.6 1,145,069 + -1.7 1,145,089 - -2.2 1,145,129 + +0.1 1,145,130 - -0.4 1,145,178 + +0.2 1,145,178 + -0.9 1,145,179 - -0.7 1,145,191 - -0.5 1,145,229 + +0.5 1,145,230 - +0.9 1,145,234 - -0.5 1,145,241 + -1.4 1,145,923 + CA264_04935 0.22 -1.7 1,146,065 + CA264_04935 0.26 -0.4 1,147,692 - CA264_04935 0.78 -0.8 1,147,710 - CA264_04935 0.79 -0.8 1,147,712 + CA264_04935 0.79 -0.8 1,147,712 + CA264_04935 0.79 +0.0 1,147,712 + CA264_04935 0.79 -0.1 1,148,024 + CA264_04935 0.89 +0.0 1,148,026 + CA264_04935 0.89 +1.2 1,148,161 + -1.3 1,148,172 + +1.6 1,148,301 + -0.7 1,148,373 - -0.3 1,148,404 + -0.2 1,148,417 - -0.6 1,148,671 - CA264_04940 0.16 -1.8 1,148,814 - CA264_04940 0.24 -1.2 1,148,860 + CA264_04940 0.27 -0.2
Or see this region's nucleotide sequence