Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04410 and CA264_04415 are separated by 258 nucleotides CA264_04415 and CA264_04420 are separated by 109 nucleotides
CA264_04410: CA264_04410 - hypothetical protein, at 1,019,744 to 1,020,802
_04410
CA264_04415: CA264_04415 - hypothetical protein, at 1,021,061 to 1,021,351
_04415
CA264_04420: CA264_04420 - Xaa-Pro aminopeptidase, at 1,021,461 to 1,022,819
_04420
Position (kb)
1021
1022 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1020.129 kb on + strand, within CA264_04410 at 1020.129 kb on + strand, within CA264_04410 at 1020.130 kb on - strand, within CA264_04410 at 1020.137 kb on + strand, within CA264_04410 at 1020.137 kb on + strand, within CA264_04410 at 1020.137 kb on + strand, within CA264_04410 at 1020.139 kb on + strand, within CA264_04410 at 1020.140 kb on - strand, within CA264_04410 at 1020.145 kb on + strand, within CA264_04410 at 1020.145 kb on + strand, within CA264_04410 at 1020.171 kb on - strand, within CA264_04410 at 1020.189 kb on + strand, within CA264_04410 at 1020.204 kb on + strand, within CA264_04410 at 1020.205 kb on - strand, within CA264_04410 at 1020.243 kb on - strand, within CA264_04410 at 1020.244 kb on + strand, within CA264_04410 at 1020.244 kb on + strand, within CA264_04410 at 1020.350 kb on + strand, within CA264_04410 at 1020.350 kb on + strand, within CA264_04410 at 1020.350 kb on + strand, within CA264_04410 at 1020.351 kb on - strand, within CA264_04410 at 1020.352 kb on + strand, within CA264_04410 at 1020.353 kb on - strand, within CA264_04410 at 1020.353 kb on - strand, within CA264_04410 at 1020.363 kb on + strand, within CA264_04410 at 1020.364 kb on - strand, within CA264_04410 at 1020.407 kb on + strand, within CA264_04410 at 1020.560 kb on + strand, within CA264_04410 at 1020.576 kb on + strand, within CA264_04410 at 1020.576 kb on + strand, within CA264_04410 at 1020.577 kb on - strand, within CA264_04410 at 1020.767 kb on - strand at 1020.830 kb on + strand at 1020.832 kb on + strand at 1020.833 kb on - strand at 1020.837 kb on - strand at 1020.837 kb on - strand at 1020.855 kb on - strand at 1020.890 kb on - strand at 1020.890 kb on - strand at 1020.961 kb on + strand at 1021.011 kb on + strand at 1021.011 kb on + strand at 1021.012 kb on - strand at 1021.029 kb on - strand at 1021.034 kb on + strand at 1021.035 kb on - strand at 1021.041 kb on - strand at 1021.065 kb on + strand at 1021.072 kb on + strand at 1021.073 kb on - strand at 1021.076 kb on + strand at 1021.076 kb on + strand at 1021.076 kb on + strand at 1021.077 kb on - strand at 1021.077 kb on - strand at 1021.078 kb on + strand at 1021.078 kb on + strand at 1021.078 kb on + strand at 1021.078 kb on + strand at 1021.079 kb on - strand at 1021.079 kb on - strand at 1021.079 kb on - strand at 1021.079 kb on - strand at 1021.079 kb on - strand at 1021.207 kb on + strand, within CA264_04415 at 1021.218 kb on + strand, within CA264_04415 at 1021.337 kb on - strand at 1021.363 kb on + strand at 1021.462 kb on + strand at 1021.463 kb on - strand at 1021.492 kb on - strand at 1021.606 kb on - strand, within CA264_04420 at 1021.630 kb on + strand, within CA264_04420 at 1021.654 kb on + strand, within CA264_04420 at 1021.698 kb on + strand, within CA264_04420 at 1021.733 kb on + strand, within CA264_04420 at 1021.744 kb on + strand, within CA264_04420 at 1021.882 kb on + strand, within CA264_04420 at 1021.882 kb on + strand, within CA264_04420 at 1021.883 kb on - strand, within CA264_04420 at 1021.885 kb on - strand, within CA264_04420 at 1021.918 kb on + strand, within CA264_04420 at 1021.918 kb on + strand, within CA264_04420 at 1021.918 kb on + strand, within CA264_04420 at 1021.918 kb on + strand, within CA264_04420 at 1021.940 kb on + strand, within CA264_04420 at 1021.940 kb on + strand, within CA264_04420 at 1021.940 kb on + strand, within CA264_04420 at 1021.941 kb on - strand, within CA264_04420 at 1021.941 kb on - strand, within CA264_04420 at 1021.955 kb on - strand, within CA264_04420 at 1022.163 kb on + strand, within CA264_04420 at 1022.224 kb on + strand, within CA264_04420 at 1022.224 kb on + strand, within CA264_04420 at 1022.225 kb on - strand, within CA264_04420 at 1022.317 kb on + strand, within CA264_04420 at 1022.318 kb on - strand, within CA264_04420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,020,129 + CA264_04410 0.36 -0.7 1,020,129 + CA264_04410 0.36 -0.6 1,020,130 - CA264_04410 0.36 +0.6 1,020,137 + CA264_04410 0.37 +0.3 1,020,137 + CA264_04410 0.37 +0.1 1,020,137 + CA264_04410 0.37 +0.1 1,020,139 + CA264_04410 0.37 +2.0 1,020,140 - CA264_04410 0.37 +1.0 1,020,145 + CA264_04410 0.38 -0.6 1,020,145 + CA264_04410 0.38 +0.5 1,020,171 - CA264_04410 0.40 -0.1 1,020,189 + CA264_04410 0.42 +2.0 1,020,204 + CA264_04410 0.43 -0.3 1,020,205 - CA264_04410 0.44 +0.6 1,020,243 - CA264_04410 0.47 -1.1 1,020,244 + CA264_04410 0.47 -0.3 1,020,244 + CA264_04410 0.47 -0.2 1,020,350 + CA264_04410 0.57 -0.4 1,020,350 + CA264_04410 0.57 -0.4 1,020,350 + CA264_04410 0.57 -0.4 1,020,351 - CA264_04410 0.57 -0.8 1,020,352 + CA264_04410 0.57 -0.1 1,020,353 - CA264_04410 0.58 -0.1 1,020,353 - CA264_04410 0.58 +1.6 1,020,363 + CA264_04410 0.58 +0.3 1,020,364 - CA264_04410 0.59 +0.4 1,020,407 + CA264_04410 0.63 -1.3 1,020,560 + CA264_04410 0.77 -0.2 1,020,576 + CA264_04410 0.79 -0.4 1,020,576 + CA264_04410 0.79 -1.8 1,020,577 - CA264_04410 0.79 -0.3 1,020,767 - +0.9 1,020,830 + -0.0 1,020,832 + -0.7 1,020,833 - +0.1 1,020,837 - -0.6 1,020,837 - -0.3 1,020,855 - +0.1 1,020,890 - +0.2 1,020,890 - +0.2 1,020,961 + -0.4 1,021,011 + -0.4 1,021,011 + -0.7 1,021,012 - -1.2 1,021,029 - +0.4 1,021,034 + +0.2 1,021,035 - +1.7 1,021,041 - +0.2 1,021,065 + -0.3 1,021,072 + -0.1 1,021,073 - +0.8 1,021,076 + -0.3 1,021,076 + -1.4 1,021,076 + +0.1 1,021,077 - -0.3 1,021,077 - +0.0 1,021,078 + +0.5 1,021,078 + -0.4 1,021,078 + -0.7 1,021,078 + +0.3 1,021,079 - -0.2 1,021,079 - -0.1 1,021,079 - -0.3 1,021,079 - +0.3 1,021,079 - -0.5 1,021,207 + CA264_04415 0.50 -0.6 1,021,218 + CA264_04415 0.54 -0.8 1,021,337 - +0.2 1,021,363 + -0.8 1,021,462 + +0.6 1,021,463 - +0.1 1,021,492 - -0.6 1,021,606 - CA264_04420 0.11 -0.4 1,021,630 + CA264_04420 0.12 -0.2 1,021,654 + CA264_04420 0.14 -1.6 1,021,698 + CA264_04420 0.17 +0.1 1,021,733 + CA264_04420 0.20 +0.4 1,021,744 + CA264_04420 0.21 +0.1 1,021,882 + CA264_04420 0.31 -1.0 1,021,882 + CA264_04420 0.31 -0.1 1,021,883 - CA264_04420 0.31 -0.4 1,021,885 - CA264_04420 0.31 -0.6 1,021,918 + CA264_04420 0.34 -0.5 1,021,918 + CA264_04420 0.34 -0.8 1,021,918 + CA264_04420 0.34 +0.2 1,021,918 + CA264_04420 0.34 +0.7 1,021,940 + CA264_04420 0.35 +0.4 1,021,940 + CA264_04420 0.35 +0.1 1,021,940 + CA264_04420 0.35 +0.0 1,021,941 - CA264_04420 0.35 -0.5 1,021,941 - CA264_04420 0.35 -1.0 1,021,955 - CA264_04420 0.36 -1.2 1,022,163 + CA264_04420 0.52 -1.4 1,022,224 + CA264_04420 0.56 -0.0 1,022,224 + CA264_04420 0.56 +0.0 1,022,225 - CA264_04420 0.56 +0.9 1,022,317 + CA264_04420 0.63 +0.4 1,022,318 - CA264_04420 0.63 -0.4
Or see this region's nucleotide sequence