Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04360 and CA264_04365 are separated by 119 nucleotides CA264_04365 and CA264_04370 are separated by 108 nucleotides CA264_04370 and CA264_04375 are separated by 33 nucleotides
CA264_04360: CA264_04360 - transketolase, at 1,008,721 to 1,011,129
_04360
CA264_04365: CA264_04365 - hypothetical protein, at 1,011,249 to 1,011,782
_04365
CA264_04370: CA264_04370 - acyl transferase, at 1,011,891 to 1,012,856
_04370
CA264_04375: CA264_04375 - peptidase, at 1,012,890 to 1,013,804
_04375
Position (kb)
1011
1012
1013 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1011.117 kb on + strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.125 kb on - strand at 1011.191 kb on + strand at 1011.204 kb on + strand at 1011.204 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.222 kb on + strand at 1011.223 kb on - strand at 1011.244 kb on + strand at 1011.245 kb on - strand at 1011.246 kb on + strand at 1011.247 kb on - strand at 1011.250 kb on + strand at 1011.320 kb on + strand, within CA264_04365 at 1011.321 kb on - strand, within CA264_04365 at 1011.468 kb on - strand, within CA264_04365 at 1011.468 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.505 kb on - strand, within CA264_04365 at 1011.507 kb on - strand, within CA264_04365 at 1011.670 kb on + strand, within CA264_04365 at 1011.670 kb on + strand, within CA264_04365 at 1011.692 kb on + strand, within CA264_04365 at 1011.712 kb on + strand, within CA264_04365 at 1011.713 kb on - strand, within CA264_04365 at 1011.713 kb on - strand, within CA264_04365 at 1011.754 kb on - strand at 1011.777 kb on + strand at 1011.785 kb on - strand at 1011.785 kb on - strand at 1012.069 kb on + strand, within CA264_04370 at 1012.174 kb on + strand, within CA264_04370 at 1012.219 kb on - strand, within CA264_04370 at 1012.326 kb on + strand, within CA264_04370 at 1012.327 kb on - strand, within CA264_04370 at 1012.555 kb on + strand, within CA264_04370 at 1012.580 kb on + strand, within CA264_04370 at 1012.580 kb on + strand, within CA264_04370 at 1012.581 kb on - strand, within CA264_04370 at 1012.581 kb on - strand, within CA264_04370 at 1012.644 kb on - strand, within CA264_04370 at 1012.720 kb on + strand, within CA264_04370 at 1012.721 kb on - strand, within CA264_04370 at 1012.855 kb on - strand at 1012.907 kb on + strand at 1013.040 kb on + strand, within CA264_04375 at 1013.125 kb on + strand, within CA264_04375 at 1013.126 kb on - strand, within CA264_04375 at 1013.126 kb on - strand, within CA264_04375 at 1013.208 kb on + strand, within CA264_04375 at 1013.257 kb on - strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.258 kb on + strand, within CA264_04375 at 1013.325 kb on + strand, within CA264_04375 at 1013.326 kb on - strand, within CA264_04375 at 1013.330 kb on + strand, within CA264_04375 at 1013.330 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.395 kb on + strand, within CA264_04375 at 1013.396 kb on - strand, within CA264_04375 at 1013.396 kb on - strand, within CA264_04375 at 1013.495 kb on + strand, within CA264_04375 at 1013.496 kb on - strand, within CA264_04375 at 1013.496 kb on - strand, within CA264_04375 at 1013.509 kb on + strand, within CA264_04375 at 1013.509 kb on + strand, within CA264_04375 at 1013.547 kb on + strand, within CA264_04375 at 1013.651 kb on - strand, within CA264_04375 at 1013.772 kb on + strand at 1013.774 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 1,011,117 + -1.4 1,011,125 - -0.0 1,011,125 - -0.4 1,011,125 - +0.1 1,011,125 - -0.9 1,011,191 + -1.0 1,011,204 + -1.0 1,011,204 + -0.6 1,011,222 + -0.1 1,011,222 + +1.0 1,011,222 + -0.8 1,011,222 + -0.7 1,011,223 - +0.1 1,011,244 + -0.7 1,011,245 - +0.5 1,011,246 + -0.2 1,011,247 - -1.5 1,011,250 + -0.1 1,011,320 + CA264_04365 0.13 -0.3 1,011,321 - CA264_04365 0.13 +0.1 1,011,468 - CA264_04365 0.41 +1.2 1,011,468 - CA264_04365 0.41 +0.5 1,011,505 - CA264_04365 0.48 -0.7 1,011,505 - CA264_04365 0.48 -0.8 1,011,505 - CA264_04365 0.48 -1.0 1,011,507 - CA264_04365 0.48 +0.1 1,011,670 + CA264_04365 0.79 -0.2 1,011,670 + CA264_04365 0.79 +0.3 1,011,692 + CA264_04365 0.83 +0.0 1,011,712 + CA264_04365 0.87 +0.0 1,011,713 - CA264_04365 0.87 -0.2 1,011,713 - CA264_04365 0.87 -1.1 1,011,754 - -0.4 1,011,777 + -1.2 1,011,785 - -1.0 1,011,785 - +0.3 1,012,069 + CA264_04370 0.18 -1.0 1,012,174 + CA264_04370 0.29 -0.2 1,012,219 - CA264_04370 0.34 -0.6 1,012,326 + CA264_04370 0.45 -3.0 1,012,327 - CA264_04370 0.45 -1.0 1,012,555 + CA264_04370 0.69 -0.3 1,012,580 + CA264_04370 0.71 -0.5 1,012,580 + CA264_04370 0.71 -0.6 1,012,581 - CA264_04370 0.71 -1.3 1,012,581 - CA264_04370 0.71 -2.3 1,012,644 - CA264_04370 0.78 -0.4 1,012,720 + CA264_04370 0.86 +0.6 1,012,721 - CA264_04370 0.86 -0.7 1,012,855 - -0.2 1,012,907 + -2.0 1,013,040 + CA264_04375 0.16 +0.5 1,013,125 + CA264_04375 0.26 +3.0 1,013,126 - CA264_04375 0.26 -0.1 1,013,126 - CA264_04375 0.26 +0.3 1,013,208 + CA264_04375 0.35 -0.1 1,013,257 - CA264_04375 0.40 -0.8 1,013,258 + CA264_04375 0.40 -0.7 1,013,258 + CA264_04375 0.40 -0.5 1,013,258 + CA264_04375 0.40 +0.1 1,013,325 + CA264_04375 0.48 +0.3 1,013,326 - CA264_04375 0.48 -0.4 1,013,330 + CA264_04375 0.48 -0.1 1,013,330 + CA264_04375 0.48 -0.5 1,013,395 + CA264_04375 0.55 -0.0 1,013,395 + CA264_04375 0.55 -0.1 1,013,395 + CA264_04375 0.55 +0.7 1,013,395 + CA264_04375 0.55 -1.8 1,013,395 + CA264_04375 0.55 +0.0 1,013,395 + CA264_04375 0.55 +0.1 1,013,396 - CA264_04375 0.55 -0.2 1,013,396 - CA264_04375 0.55 -1.5 1,013,495 + CA264_04375 0.66 -0.5 1,013,496 - CA264_04375 0.66 -0.6 1,013,496 - CA264_04375 0.66 -0.8 1,013,509 + CA264_04375 0.68 -0.3 1,013,509 + CA264_04375 0.68 -0.7 1,013,547 + CA264_04375 0.72 +0.4 1,013,651 - CA264_04375 0.83 -0.3 1,013,772 + -0.5 1,013,774 + +0.8
Or see this region's nucleotide sequence