Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01730 and CA264_01735 are separated by 206 nucleotides CA264_01735 and CA264_01740 are separated by 0 nucleotides
CA264_01730: CA264_01730 - NADH-quinone oxidoreductase subunit L, at 403,012 to 405,156
_01730
CA264_01735: CA264_01735 - oxidoreductase, at 405,363 to 407,105
_01735
CA264_01740: CA264_01740 - proton-translocating NADH-quinone oxidoreductase subunit N, at 407,106 to 408,611
_01740
Position (kb) 405
406
407
408 Strain fitness (log2 ratio) -2
-1
0
1
2 at 404.369 kb on - strand, within CA264_01730 at 404.370 kb on + strand, within CA264_01730 at 404.371 kb on - strand, within CA264_01730 at 404.470 kb on - strand, within CA264_01730 at 404.483 kb on + strand, within CA264_01730 at 404.615 kb on + strand, within CA264_01730 at 404.615 kb on + strand, within CA264_01730 at 404.616 kb on - strand, within CA264_01730 at 404.630 kb on + strand, within CA264_01730 at 404.630 kb on + strand, within CA264_01730 at 404.643 kb on + strand, within CA264_01730 at 404.728 kb on - strand, within CA264_01730 at 404.732 kb on + strand, within CA264_01730 at 404.772 kb on + strand, within CA264_01730 at 404.796 kb on - strand, within CA264_01730 at 404.822 kb on + strand, within CA264_01730 at 404.970 kb on - strand at 405.137 kb on + strand at 405.139 kb on + strand at 405.141 kb on + strand at 405.141 kb on + strand at 405.142 kb on - strand at 405.142 kb on - strand at 405.142 kb on - strand at 405.160 kb on + strand at 405.214 kb on - strand at 405.216 kb on + strand at 405.217 kb on - strand at 405.217 kb on - strand at 405.228 kb on + strand at 405.228 kb on + strand at 405.245 kb on + strand at 405.246 kb on - strand at 405.246 kb on - strand at 405.264 kb on + strand at 405.264 kb on + strand at 405.264 kb on + strand at 405.289 kb on - strand at 405.329 kb on + strand at 405.329 kb on + strand at 405.508 kb on - strand at 405.572 kb on - strand, within CA264_01735 at 405.741 kb on + strand, within CA264_01735 at 405.741 kb on + strand, within CA264_01735 at 405.785 kb on - strand, within CA264_01735 at 405.845 kb on - strand, within CA264_01735 at 405.845 kb on - strand, within CA264_01735 at 405.885 kb on - strand, within CA264_01735 at 405.893 kb on + strand, within CA264_01735 at 405.900 kb on - strand, within CA264_01735 at 406.736 kb on + strand, within CA264_01735 at 406.849 kb on - strand, within CA264_01735 at 406.855 kb on + strand, within CA264_01735 at 407.020 kb on + strand at 407.099 kb on - strand at 407.124 kb on + strand at 407.591 kb on + strand, within CA264_01740 at 407.629 kb on - strand, within CA264_01740 at 408.082 kb on + strand, within CA264_01740
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 404,369 - CA264_01730 0.63 +0.6 404,370 + CA264_01730 0.63 +0.0 404,371 - CA264_01730 0.63 -0.8 404,470 - CA264_01730 0.68 -1.3 404,483 + CA264_01730 0.69 -0.8 404,615 + CA264_01730 0.75 -0.1 404,615 + CA264_01730 0.75 -0.5 404,616 - CA264_01730 0.75 +0.4 404,630 + CA264_01730 0.75 -2.0 404,630 + CA264_01730 0.75 -2.1 404,643 + CA264_01730 0.76 -1.3 404,728 - CA264_01730 0.80 +1.8 404,732 + CA264_01730 0.80 -0.3 404,772 + CA264_01730 0.82 -0.4 404,796 - CA264_01730 0.83 -0.7 404,822 + CA264_01730 0.84 -0.5 404,970 - +1.8 405,137 + -1.3 405,139 + +0.2 405,141 + +1.2 405,141 + -1.0 405,142 - -0.2 405,142 - -0.6 405,142 - -1.0 405,160 + -0.2 405,214 - +0.4 405,216 + +1.1 405,217 - -1.2 405,217 - +0.7 405,228 + +0.2 405,228 + -0.4 405,245 + +0.0 405,246 - -0.2 405,246 - -0.5 405,264 + -0.5 405,264 + +0.0 405,264 + +0.1 405,289 - -0.1 405,329 + +0.5 405,329 + -0.3 405,508 - -0.9 405,572 - CA264_01735 0.12 -1.1 405,741 + CA264_01735 0.22 -1.1 405,741 + CA264_01735 0.22 -0.7 405,785 - CA264_01735 0.24 -1.2 405,845 - CA264_01735 0.28 -1.3 405,845 - CA264_01735 0.28 -0.3 405,885 - CA264_01735 0.30 -0.4 405,893 + CA264_01735 0.30 -1.1 405,900 - CA264_01735 0.31 -0.8 406,736 + CA264_01735 0.79 -0.7 406,849 - CA264_01735 0.85 -0.2 406,855 + CA264_01735 0.86 -1.1 407,020 + -0.2 407,099 - -2.2 407,124 + -0.4 407,591 + CA264_01740 0.32 +0.1 407,629 - CA264_01740 0.35 -1.4 408,082 + CA264_01740 0.65 -0.8
Or see this region's nucleotide sequence