Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00445 and CA264_00450 are separated by 153 nucleotides CA264_00450 and CA264_00455 overlap by 52 nucleotides CA264_00455 and CA264_00460 are separated by 3 nucleotides CA264_00460 and CA264_00465 are separated by 72 nucleotides
CA264_00445: CA264_00445 - hypothetical protein, at 95,527 to 97,518
_00445
CA264_00450: CA264_00450 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, at 97,672 to 98,394
_00450
CA264_00455: CA264_00455 - PorT-like protein, at 98,343 to 99,113
_00455
CA264_00460: CA264_00460 - NAD(P)-dependent oxidoreductase, at 99,117 to 99,869
_00460
CA264_00465: CA264_00465 - DNA mismatch repair protein MutT, at 99,942 to 100,340
_00465
Position (kb) 98
99
100 Strain fitness (log2 ratio) -2
-1
0
1 at 97.371 kb on - strand at 97.485 kb on + strand at 97.485 kb on + strand at 97.486 kb on - strand at 97.551 kb on - strand at 97.551 kb on - strand at 97.552 kb on + strand at 97.552 kb on + strand at 97.621 kb on + strand at 97.622 kb on - strand at 97.629 kb on + strand at 97.630 kb on - strand at 97.659 kb on + strand at 97.660 kb on - strand at 97.683 kb on - strand at 98.514 kb on + strand, within CA264_00455 at 98.539 kb on - strand, within CA264_00455 at 98.562 kb on + strand, within CA264_00455 at 98.599 kb on + strand, within CA264_00455 at 98.662 kb on - strand, within CA264_00455 at 98.697 kb on + strand, within CA264_00455 at 98.697 kb on + strand, within CA264_00455 at 98.725 kb on + strand, within CA264_00455 at 98.725 kb on + strand, within CA264_00455 at 98.755 kb on + strand, within CA264_00455 at 98.800 kb on + strand, within CA264_00455 at 98.808 kb on + strand, within CA264_00455 at 98.841 kb on + strand, within CA264_00455 at 98.841 kb on + strand, within CA264_00455 at 98.976 kb on + strand, within CA264_00455 at 98.976 kb on + strand, within CA264_00455 at 98.976 kb on + strand, within CA264_00455 at 98.977 kb on - strand, within CA264_00455 at 98.977 kb on - strand, within CA264_00455 at 98.981 kb on + strand, within CA264_00455 at 99.027 kb on + strand, within CA264_00455 at 99.029 kb on + strand, within CA264_00455 at 99.030 kb on - strand, within CA264_00455 at 99.030 kb on - strand, within CA264_00455 at 99.030 kb on - strand, within CA264_00455 at 99.051 kb on + strand at 99.061 kb on - strand at 99.111 kb on + strand at 99.278 kb on + strand, within CA264_00460 at 99.464 kb on - strand, within CA264_00460 at 99.527 kb on + strand, within CA264_00460 at 99.528 kb on - strand, within CA264_00460 at 99.544 kb on + strand, within CA264_00460 at 99.544 kb on + strand, within CA264_00460 at 99.545 kb on - strand, within CA264_00460 at 99.547 kb on - strand, within CA264_00460 at 99.650 kb on - strand, within CA264_00460 at 99.722 kb on - strand, within CA264_00460 at 99.723 kb on + strand, within CA264_00460 at 99.724 kb on - strand, within CA264_00460 at 99.849 kb on - strand at 99.879 kb on + strand at 99.879 kb on + strand at 99.882 kb on - strand at 99.882 kb on - strand at 99.908 kb on + strand at 100.019 kb on - strand, within CA264_00465 at 100.029 kb on + strand, within CA264_00465 at 100.030 kb on - strand, within CA264_00465 at 100.030 kb on - strand, within CA264_00465 at 100.041 kb on + strand, within CA264_00465 at 100.042 kb on - strand, within CA264_00465 at 100.085 kb on - strand, within CA264_00465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 97,371 - -0.8 97,485 + -0.4 97,485 + -1.3 97,486 - -0.4 97,551 - -1.1 97,551 - -0.1 97,552 + -0.5 97,552 + +0.0 97,621 + -2.3 97,622 - -0.5 97,629 + -0.6 97,630 - -0.1 97,659 + +0.2 97,660 - +0.3 97,683 - +1.5 98,514 + CA264_00455 0.22 -0.3 98,539 - CA264_00455 0.25 -2.6 98,562 + CA264_00455 0.28 -1.1 98,599 + CA264_00455 0.33 -0.3 98,662 - CA264_00455 0.41 +0.5 98,697 + CA264_00455 0.46 +0.2 98,697 + CA264_00455 0.46 +0.5 98,725 + CA264_00455 0.50 -0.5 98,725 + CA264_00455 0.50 -1.3 98,755 + CA264_00455 0.53 -1.2 98,800 + CA264_00455 0.59 -0.9 98,808 + CA264_00455 0.60 -0.6 98,841 + CA264_00455 0.65 -0.4 98,841 + CA264_00455 0.65 +1.2 98,976 + CA264_00455 0.82 -1.4 98,976 + CA264_00455 0.82 -0.7 98,976 + CA264_00455 0.82 -0.5 98,977 - CA264_00455 0.82 -0.1 98,977 - CA264_00455 0.82 -0.9 98,981 + CA264_00455 0.83 -0.8 99,027 + CA264_00455 0.89 -0.5 99,029 + CA264_00455 0.89 +0.3 99,030 - CA264_00455 0.89 -0.5 99,030 - CA264_00455 0.89 -0.7 99,030 - CA264_00455 0.89 -2.0 99,051 + +0.3 99,061 - -1.5 99,111 + -0.3 99,278 + CA264_00460 0.21 +0.7 99,464 - CA264_00460 0.46 -0.4 99,527 + CA264_00460 0.54 +0.4 99,528 - CA264_00460 0.55 -0.0 99,544 + CA264_00460 0.57 +1.0 99,544 + CA264_00460 0.57 -0.5 99,545 - CA264_00460 0.57 +0.3 99,547 - CA264_00460 0.57 -0.1 99,650 - CA264_00460 0.71 +0.9 99,722 - CA264_00460 0.80 -0.9 99,723 + CA264_00460 0.80 -0.7 99,724 - CA264_00460 0.81 -0.4 99,849 - -1.1 99,879 + -0.1 99,879 + -0.7 99,882 - -0.2 99,882 - +0.2 99,908 + +1.1 100,019 - CA264_00465 0.19 -1.0 100,029 + CA264_00465 0.22 -0.3 100,030 - CA264_00465 0.22 +0.3 100,030 - CA264_00465 0.22 -1.5 100,041 + CA264_00465 0.25 -0.4 100,042 - CA264_00465 0.25 +0.2 100,085 - CA264_00465 0.36 +0.4
Or see this region's nucleotide sequence