Experiment: m.b. sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00020 and CA264_00025 are separated by 57 nucleotides CA264_00025 and CA264_00030 are separated by 15 nucleotides
CA264_00020: CA264_00020 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 4,390 to 5,541
_00020
CA264_00025: CA264_00025 - RIP metalloprotease RseP, at 5,599 to 6,912
_00025
CA264_00030: CA264_00030 - peptidoglycan-binding protein, at 6,928 to 8,055
_00030
Position (kb) 5
6
7 Strain fitness (log2 ratio) -1
0
1 at 5.540 kb on - strand at 5.548 kb on - strand at 5.566 kb on + strand at 5.606 kb on + strand at 5.607 kb on - strand at 5.713 kb on + strand at 6.011 kb on - strand, within CA264_00025 at 6.149 kb on - strand, within CA264_00025 at 6.149 kb on - strand, within CA264_00025 at 6.436 kb on - strand, within CA264_00025 at 6.443 kb on + strand, within CA264_00025 at 6.893 kb on + strand at 6.910 kb on + strand at 6.910 kb on + strand at 6.954 kb on - strand at 7.086 kb on + strand, within CA264_00030 at 7.090 kb on + strand, within CA264_00030 at 7.090 kb on + strand, within CA264_00030 at 7.090 kb on + strand, within CA264_00030 at 7.090 kb on + strand, within CA264_00030 at 7.090 kb on + strand, within CA264_00030 at 7.091 kb on - strand, within CA264_00030 at 7.091 kb on - strand, within CA264_00030 at 7.093 kb on + strand, within CA264_00030 at 7.093 kb on + strand, within CA264_00030 at 7.146 kb on + strand, within CA264_00030 at 7.146 kb on + strand, within CA264_00030 at 7.178 kb on - strand, within CA264_00030 at 7.352 kb on - strand, within CA264_00030 at 7.397 kb on + strand, within CA264_00030 at 7.397 kb on + strand, within CA264_00030 at 7.398 kb on - strand, within CA264_00030 at 7.399 kb on + strand, within CA264_00030 at 7.400 kb on - strand, within CA264_00030 at 7.400 kb on - strand, within CA264_00030 at 7.400 kb on - strand, within CA264_00030 at 7.400 kb on - strand, within CA264_00030 at 7.437 kb on + strand, within CA264_00030 at 7.592 kb on - strand, within CA264_00030 at 7.599 kb on + strand, within CA264_00030 at 7.668 kb on - strand, within CA264_00030 at 7.807 kb on + strand, within CA264_00030 at 7.811 kb on - strand, within CA264_00030 at 7.811 kb on - strand, within CA264_00030 at 7.880 kb on - strand, within CA264_00030 at 7.903 kb on + strand, within CA264_00030
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. sodium fluoride 12.5 mM remove 5,540 - -0.5 5,548 - -0.4 5,566 + -1.6 5,606 + -0.3 5,607 - -0.5 5,713 + -1.6 6,011 - CA264_00025 0.31 -1.1 6,149 - CA264_00025 0.42 -1.2 6,149 - CA264_00025 0.42 -0.8 6,436 - CA264_00025 0.64 +0.2 6,443 + CA264_00025 0.64 -1.5 6,893 + +0.3 6,910 + +0.3 6,910 + -0.0 6,954 - -0.5 7,086 + CA264_00030 0.14 -0.3 7,090 + CA264_00030 0.14 -0.3 7,090 + CA264_00030 0.14 -0.3 7,090 + CA264_00030 0.14 -0.5 7,090 + CA264_00030 0.14 -0.3 7,090 + CA264_00030 0.14 -1.1 7,091 - CA264_00030 0.14 +0.7 7,091 - CA264_00030 0.14 -0.2 7,093 + CA264_00030 0.15 -1.0 7,093 + CA264_00030 0.15 +1.5 7,146 + CA264_00030 0.19 -0.3 7,146 + CA264_00030 0.19 +0.2 7,178 - CA264_00030 0.22 -0.1 7,352 - CA264_00030 0.38 -0.1 7,397 + CA264_00030 0.42 -0.4 7,397 + CA264_00030 0.42 -0.3 7,398 - CA264_00030 0.42 +1.6 7,399 + CA264_00030 0.42 -0.1 7,400 - CA264_00030 0.42 +0.7 7,400 - CA264_00030 0.42 -0.5 7,400 - CA264_00030 0.42 -1.0 7,400 - CA264_00030 0.42 -0.3 7,437 + CA264_00030 0.45 -0.4 7,592 - CA264_00030 0.59 -0.3 7,599 + CA264_00030 0.59 +0.8 7,668 - CA264_00030 0.66 +0.9 7,807 + CA264_00030 0.78 -0.1 7,811 - CA264_00030 0.78 -1.0 7,811 - CA264_00030 0.78 -0.4 7,880 - CA264_00030 0.84 +0.7 7,903 + CA264_00030 0.86 -0.5
Or see this region's nucleotide sequence