Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS31255

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,077,843	-		PFLU_RS09395	0.29	-0.1
2,077,920	-		PFLU_RS09395	0.35	-0.4
2,077,920	-		PFLU_RS09395	0.35	-0.3
2,077,941	-		PFLU_RS09395	0.36	-0.1
2,077,941	-		PFLU_RS09395	0.36	+0.4
2,077,947	+		PFLU_RS09395	0.37	-1.2
2,077,971	+		PFLU_RS09395	0.38	+0.2
2,077,972	-		PFLU_RS09395	0.39	-0.2
2,077,972	-		PFLU_RS09395	0.39	-2.0
2,077,972	-		PFLU_RS09395	0.39	-0.9
2,077,995	-		PFLU_RS09395	0.40	+0.4
2,078,061	+		PFLU_RS09395	0.45	+1.6
2,078,062	-		PFLU_RS09395	0.46	+1.6
2,078,086	-		PFLU_RS09395	0.47	-1.0
2,078,175	+		PFLU_RS09395	0.54	+0.5
2,078,175	+		PFLU_RS09395	0.54	+0.3
2,078,176	-		PFLU_RS09395	0.54	-0.6
2,078,198	+		PFLU_RS09395	0.56	+1.3
2,078,198	+		PFLU_RS09395	0.56	+1.6
2,078,198	+		PFLU_RS09395	0.56	+1.8
2,078,198	+		PFLU_RS09395	0.56	+1.0
2,078,198	+		PFLU_RS09395	0.56	+0.6
2,078,199	-		PFLU_RS09395	0.56	+0.4
2,078,247	+		PFLU_RS09395	0.60	-1.7
2,078,247	+		PFLU_RS09395	0.60	+0.0
2,078,247	+		PFLU_RS09395	0.60	-0.7
2,078,259	+		PFLU_RS09395	0.61	+0.5
2,078,259	+		PFLU_RS09395	0.61	+1.7
2,078,259	+		PFLU_RS09395	0.61	-0.3
2,078,361	-		PFLU_RS09395	0.69	+0.2
2,078,445	+		PFLU_RS09395	0.75	-1.6
2,078,446	-		PFLU_RS09395	0.75	+0.0
2,078,446	-		PFLU_RS09395	0.75	-0.8
2,078,451	+		PFLU_RS09395	0.76	+0.6
2,078,451	+		PFLU_RS09395	0.76	-1.3
2,078,451	+		PFLU_RS09395	0.76	-0.9
2,078,452	-		PFLU_RS09395	0.76	+0.2
2,078,452	-		PFLU_RS09395	0.76	+0.9
2,078,452	-		PFLU_RS09395	0.76	-0.9
2,078,452	-		PFLU_RS09395	0.76	-0.3
2,078,472	+		PFLU_RS09395	0.77	-0.3
2,078,473	-		PFLU_RS09395	0.78	-1.0
2,078,473	-		PFLU_RS09395	0.78	+1.1
2,078,533	+		PFLU_RS09395	0.82	+1.3
2,078,533	+		PFLU_RS09395	0.82	+1.9
2,078,533	+		PFLU_RS09395	0.82	-1.4
2,078,534	-		PFLU_RS09395	0.82	-0.1
2,078,534	-		PFLU_RS09395	0.82	-0.2
2,078,534	-		PFLU_RS09395	0.82	-1.0
2,078,553	+		PFLU_RS09395	0.84	+1.6
2,078,563	+		PFLU_RS09395	0.85	+0.5
2,078,563	+		PFLU_RS09395	0.85	+0.8
2,078,563	+		PFLU_RS09395	0.85	-1.4
2,078,564	-		PFLU_RS09395	0.85	-1.7
2,078,564	-		PFLU_RS09395	0.85	+0.1
2,078,701	-				-0.9
2,078,807	+				-0.3
2,078,807	+				-0.5
2,078,807	+				+0.1
2,078,807	+				-0.3
2,078,808	-				-0.2
2,078,808	-				+0.9
2,078,808	-				+0.0
2,078,808	-				-0.8
2,078,808	-				-0.8
2,078,849	+		PFLU_RS31255	0.19	+0.5
2,078,849	+		PFLU_RS31255	0.19	-1.7
2,078,849	+		PFLU_RS31255	0.19	+0.1
2,078,905	+		PFLU_RS31255	0.42	+0.3
2,078,906	-		PFLU_RS31255	0.43	-0.6
2,078,906	-		PFLU_RS31255	0.43	+0.7
2,078,909	+		PFLU_RS31255	0.44	-0.6
2,078,909	+		PFLU_RS31255	0.44	+0.3
2,078,909	+		PFLU_RS31255	0.44	-1.4
2,078,909	+		PFLU_RS31255	0.44	+0.6
2,078,910	-		PFLU_RS31255	0.44	+0.3
2,078,910	-		PFLU_RS31255	0.44	-0.8
2,078,910	-		PFLU_RS31255	0.44	-1.1
2,079,010	-		PFLU_RS31255	0.86	-0.3
2,079,010	-		PFLU_RS31255	0.86	+0.2
2,079,026	+				-1.5
2,079,026	+				-1.2
2,079,026	+				-0.4
2,079,026	+				+0.2
2,079,026	+				-0.1
2,079,026	+				+1.3
2,079,026	+				-0.0
2,079,026	+				-2.0
2,079,026	+				-2.2
2,079,027	-				-1.3
2,079,027	-				-1.1
2,079,027	-				+1.2
2,079,027	-				-0.4
2,079,027	-				+0.2
2,079,048	-				+0.8
2,079,048	-				-1.4
2,079,048	-				-1.5
2,079,083	+				+0.4
2,079,083	+				+0.1
2,079,083	+				+0.3
2,079,083	+				+0.8
2,079,084	-				+1.2
2,079,084	-				+0.8
2,079,149	+				+0.8
2,079,150	-				-0.8
2,079,312	+		PFLU_RS09405	0.12	-1.1
2,079,313	-		PFLU_RS09405	0.13	-0.4
2,079,400	+		PFLU_RS09405	0.45	-2.3
2,079,400	+		PFLU_RS09405	0.45	-0.1
2,079,400	+		PFLU_RS09405	0.45	+0.8
2,079,400	+		PFLU_RS09405	0.45	-1.8
2,079,400	+		PFLU_RS09405	0.45	+0.4
2,079,400	+		PFLU_RS09405	0.45	+1.6
2,079,401	-		PFLU_RS09405	0.46	+0.6
2,079,401	-		PFLU_RS09405	0.46	-0.7
2,079,401	-		PFLU_RS09405	0.46	-0.7
2,079,401	-		PFLU_RS09405	0.46	-0.7
2,079,401	-		PFLU_RS09405	0.46	-0.4
2,079,401	-		PFLU_RS09405	0.46	-2.5
2,079,401	-		PFLU_RS09405	0.46	-0.5
2,079,401	-		PFLU_RS09405	0.46	-0.2
2,079,401	-		PFLU_RS09405	0.46	-0.4
2,079,401	-		PFLU_RS09405	0.46	-0.4
2,079,418	-		PFLU_RS09405	0.52	-0.7
2,079,472	-		PFLU_RS09405	0.72	+0.6
2,079,472	-		PFLU_RS09405	0.72	+0.7
2,079,472	-		PFLU_RS09405	0.72	-0.2
2,079,532	+				+0.0
2,079,542	-				+1.3
2,079,552	+				+1.3
2,079,562	-				+0.4
2,079,765	+		PFLU_RS09410	0.55	+1.3
2,079,766	-		PFLU_RS09410	0.55	-0.7
2,079,766	-		PFLU_RS09410	0.55	-0.1
2,079,865	+		PFLU_RS09410	0.85	-0.1
2,079,865	+		PFLU_RS09410	0.85	+1.0
2,079,865	+		PFLU_RS09410	0.85	-1.1
2,079,865	+		PFLU_RS09410	0.85	+0.3
2,079,866	-		PFLU_RS09410	0.86	-0.2
2,079,866	-		PFLU_RS09410	0.86	+2.0
2,079,866	-		PFLU_RS09410	0.86	-1.5
2,079,866	-		PFLU_RS09410	0.86	-2.7
2,079,872	+		PFLU_RS09410	0.88	-1.4
2,079,873	-		PFLU_RS09410	0.88	-1.1
2,079,873	-		PFLU_RS09410	0.88	+0.4
2,079,924	+				+0.3
2,079,924	+				+0.1
2,079,924	+				-1.6
2,079,958	-				+0.8
2,079,996	+				+0.6
2,079,996	+				+1.2
2,079,996	+				+0.4
2,079,996	+				+1.6
2,080,025	+				-0.9
2,080,026	-				-0.3
2,080,026	-				-0.5
2,080,026	-				-0.1