Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS25665

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
5,729,387	+		PFLU_RS25655	0.50	+0.6
5,729,419	+		PFLU_RS25655	0.60	-1.5
5,729,516	+		PFLU_RS25655	0.89	+1.2
5,729,516	+		PFLU_RS25655	0.89	-1.4
5,729,516	+		PFLU_RS25655	0.89	+0.5
5,729,516	+		PFLU_RS25655	0.89	-0.8
5,729,516	+		PFLU_RS25655	0.89	+0.2
5,729,516	+		PFLU_RS25655	0.89	-0.8
5,729,516	+		PFLU_RS25655	0.89	+0.3
5,729,516	+		PFLU_RS25655	0.89	+0.6
5,729,516	+		PFLU_RS25655	0.89	+0.7
5,729,516	+		PFLU_RS25655	0.89	+0.4
5,729,516	+		PFLU_RS25655	0.89	+0.9
5,729,517	-		PFLU_RS25655	0.89	+0.3
5,729,517	-		PFLU_RS25655	0.89	+0.4
5,729,517	-		PFLU_RS25655	0.89	-0.0
5,729,517	-		PFLU_RS25655	0.89	+0.1
5,729,517	-		PFLU_RS25655	0.89	-1.3
5,729,517	-		PFLU_RS25655	0.89	+0.3
5,729,517	-		PFLU_RS25655	0.89	+1.3
5,729,517	-		PFLU_RS25655	0.89	-0.5
5,729,747	+		PFLU_RS25660	0.27	-0.9
5,729,747	+		PFLU_RS25660	0.27	+0.6
5,729,747	+		PFLU_RS25660	0.27	-0.0
5,729,747	+		PFLU_RS25660	0.27	-0.4
5,729,747	+		PFLU_RS25660	0.27	-2.0
5,729,748	-		PFLU_RS25660	0.27	-0.8
5,729,748	-		PFLU_RS25660	0.27	-0.2
5,729,945	+		PFLU_RS25660	0.54	-2.1
5,729,945	+		PFLU_RS25660	0.54	-0.1
5,729,945	+		PFLU_RS25660	0.54	-0.6
5,729,945	+		PFLU_RS25660	0.54	-0.2
5,729,945	+		PFLU_RS25660	0.54	-0.9
5,729,945	+		PFLU_RS25660	0.54	-1.7
5,729,945	+		PFLU_RS25660	0.54	-1.4
5,729,945	+		PFLU_RS25660	0.54	-0.1
5,729,945	+		PFLU_RS25660	0.54	-0.8
5,729,945	+		PFLU_RS25660	0.54	-1.0
5,729,945	+		PFLU_RS25660	0.54	+0.2
5,729,945	+		PFLU_RS25660	0.54	+0.9
5,729,945	+		PFLU_RS25660	0.54	-1.3
5,729,946	-		PFLU_RS25660	0.54	-1.0
5,729,946	-		PFLU_RS25660	0.54	-0.7
5,729,946	-		PFLU_RS25660	0.54	+1.0
5,729,946	-		PFLU_RS25660	0.54	-0.8
5,729,946	-		PFLU_RS25660	0.54	-0.9
5,729,946	-		PFLU_RS25660	0.54	-0.3
5,729,946	-		PFLU_RS25660	0.54	+1.6
5,729,946	-		PFLU_RS25660	0.54	+0.3
5,729,946	-		PFLU_RS25660	0.54	+0.9
5,729,946	-		PFLU_RS25660	0.54	-1.2
5,729,946	-		PFLU_RS25660	0.54	-0.8
5,730,258	+				+0.9
5,730,258	+				-0.6
5,730,259	-				-0.7
5,730,259	-				+2.8
5,730,259	-				-0.2
5,730,259	-				+1.7
5,730,259	-				+0.3
5,730,259	-				-0.0
5,730,261	+				-0.6
5,730,261	+				-0.3
5,730,261	+				+2.0
5,730,261	+				-0.3
5,730,261	+				+0.1
5,730,261	+				-1.2
5,730,261	+				-0.4
5,730,262	-				-1.0
5,730,262	-				+0.7
5,730,262	-				-0.1
5,730,262	-				+0.4
5,730,262	-				-3.0
5,730,262	-				-1.5
5,730,262	-				+0.9
5,730,303	+				+0.9
5,730,303	+				-0.4
5,730,304	-				-1.1
5,730,304	-				+1.3
5,730,304	-				-2.2
5,730,304	-				+0.8
5,730,400	+				+1.4
5,730,400	+				-1.1
5,730,400	+				+0.2
5,730,401	-				-3.4
5,730,402	+				+0.9
5,730,402	+				+0.1
5,730,402	+				-0.3
5,730,403	-				+0.6
5,730,403	-				+0.3
5,730,481	+				-1.7
5,730,706	+		PFLU_RS25665	0.17	+0.1
5,730,706	+		PFLU_RS25665	0.17	+1.6
5,730,707	-		PFLU_RS25665	0.17	+0.9
5,730,707	-		PFLU_RS25665	0.17	+1.2
5,730,707	-		PFLU_RS25665	0.17	-0.3
5,730,708	+		PFLU_RS25665	0.17	+1.2
5,730,708	+		PFLU_RS25665	0.17	-0.1
5,730,708	+		PFLU_RS25665	0.17	-1.3
5,730,708	+		PFLU_RS25665	0.17	-0.5
5,730,708	+		PFLU_RS25665	0.17	-1.7
5,730,708	+		PFLU_RS25665	0.17	-0.6
5,730,709	-		PFLU_RS25665	0.18	-0.5
5,730,709	-		PFLU_RS25665	0.18	-0.0
5,730,765	+		PFLU_RS25665	0.20	+0.5
5,730,765	+		PFLU_RS25665	0.20	-0.7
5,730,765	+		PFLU_RS25665	0.20	+0.5
5,730,765	+		PFLU_RS25665	0.20	-0.8
5,730,766	-		PFLU_RS25665	0.20	+0.7
5,730,766	-		PFLU_RS25665	0.20	-0.3
5,730,766	-		PFLU_RS25665	0.20	+0.8
5,730,766	-		PFLU_RS25665	0.20	-0.0
5,730,766	-		PFLU_RS25665	0.20	-0.0
5,730,894	+		PFLU_RS25665	0.25	-0.2
5,730,894	+		PFLU_RS25665	0.25	-0.6
5,730,894	+		PFLU_RS25665	0.25	+0.9
5,730,894	+		PFLU_RS25665	0.25	-0.3
5,730,894	+		PFLU_RS25665	0.25	+0.6
5,730,894	+		PFLU_RS25665	0.25	-0.8
5,730,895	-		PFLU_RS25665	0.26	+1.6
5,730,895	-		PFLU_RS25665	0.26	+0.6
5,730,895	-		PFLU_RS25665	0.26	-0.0
5,730,895	-		PFLU_RS25665	0.26	+0.2
5,731,042	+		PFLU_RS25665	0.32	-0.9
5,731,042	+		PFLU_RS25665	0.32	-1.2
5,731,042	+		PFLU_RS25665	0.32	-1.4
5,731,042	+		PFLU_RS25665	0.32	-0.9
5,731,042	+		PFLU_RS25665	0.32	+0.5
5,731,043	-		PFLU_RS25665	0.32	-0.2
5,731,043	-		PFLU_RS25665	0.32	+0.1
5,731,043	-		PFLU_RS25665	0.32	+1.7
5,731,043	-		PFLU_RS25665	0.32	-0.5
5,731,047	+		PFLU_RS25665	0.32	-0.0
5,731,047	+		PFLU_RS25665	0.32	-0.0
5,731,047	+		PFLU_RS25665	0.32	-1.6
5,731,047	+		PFLU_RS25665	0.32	+2.0
5,731,048	-		PFLU_RS25665	0.32	+1.5
5,731,048	-		PFLU_RS25665	0.32	-0.6
5,731,048	-		PFLU_RS25665	0.32	+0.6
5,731,069	-		PFLU_RS25665	0.33	-1.3
5,731,077	-		PFLU_RS25665	0.33	-0.0
5,731,077	-		PFLU_RS25665	0.33	-0.9
5,731,077	-		PFLU_RS25665	0.33	-1.6
5,731,077	-		PFLU_RS25665	0.33	-1.5
5,731,077	-		PFLU_RS25665	0.33	-0.8
5,731,081	+		PFLU_RS25665	0.34	-2.7
5,731,082	-		PFLU_RS25665	0.34	-0.8
5,731,179	+		PFLU_RS25665	0.38	+0.4
5,731,179	+		PFLU_RS25665	0.38	-1.7
5,731,180	-		PFLU_RS25665	0.38	-1.4
5,731,180	-		PFLU_RS25665	0.38	+1.1
5,731,180	-		PFLU_RS25665	0.38	+0.7
5,731,180	-		PFLU_RS25665	0.38	-0.1
5,731,180	-		PFLU_RS25665	0.38	-0.7
5,731,180	-		PFLU_RS25665	0.38	+0.4
5,731,180	-		PFLU_RS25665	0.38	+0.5
5,731,180	-		PFLU_RS25665	0.38	+0.7
5,731,180	-		PFLU_RS25665	0.38	-1.7
5,731,180	-		PFLU_RS25665	0.38	+2.0
5,731,180	-		PFLU_RS25665	0.38	-1.2
5,731,209	+		PFLU_RS25665	0.39	+0.6
5,731,209	+		PFLU_RS25665	0.39	-1.2
5,731,516	+		PFLU_RS25665	0.52	+0.3
5,731,625	+		PFLU_RS25665	0.57	-1.2
5,731,625	+		PFLU_RS25665	0.57	-2.2
5,731,625	+		PFLU_RS25665	0.57	-0.5
5,731,625	+		PFLU_RS25665	0.57	+0.8
5,731,625	+		PFLU_RS25665	0.57	+1.1
5,731,625	+		PFLU_RS25665	0.57	-0.3
5,731,625	+		PFLU_RS25665	0.57	+1.0
5,731,625	+		PFLU_RS25665	0.57	-2.4
5,731,625	+		PFLU_RS25665	0.57	-3.6
5,731,625	+		PFLU_RS25665	0.57	-1.1
5,731,625	+		PFLU_RS25665	0.57	+0.8
5,731,626	-		PFLU_RS25665	0.57	-1.9
5,731,626	-		PFLU_RS25665	0.57	+0.5
5,731,626	-		PFLU_RS25665	0.57	+0.3
5,731,626	-		PFLU_RS25665	0.57	-0.3
5,731,626	-		PFLU_RS25665	0.57	-0.5
5,731,626	-		PFLU_RS25665	0.57	+0.3
5,731,626	-		PFLU_RS25665	0.57	-0.3
5,731,626	-		PFLU_RS25665	0.57	+0.4
5,731,683	+		PFLU_RS25665	0.59	+0.0
5,731,683	+		PFLU_RS25665	0.59	-1.7
5,731,683	+		PFLU_RS25665	0.59	-1.0
5,731,683	+		PFLU_RS25665	0.59	+0.5
5,731,683	+		PFLU_RS25665	0.59	+0.1
5,731,683	+		PFLU_RS25665	0.59	+0.4
5,731,683	+		PFLU_RS25665	0.59	-0.2
5,731,684	-		PFLU_RS25665	0.59	+0.6
5,731,684	-		PFLU_RS25665	0.59	-0.5
5,731,684	-		PFLU_RS25665	0.59	-0.8
5,731,684	-		PFLU_RS25665	0.59	-0.1
5,731,684	-		PFLU_RS25665	0.59	+1.0
5,731,684	-		PFLU_RS25665	0.59	-1.0
5,731,684	-		PFLU_RS25665	0.59	+0.9
5,731,684	-		PFLU_RS25665	0.59	+0.4
5,731,684	-		PFLU_RS25665	0.59	-1.0
5,731,684	-		PFLU_RS25665	0.59	-0.7
5,731,684	-		PFLU_RS25665	0.59	-0.9
5,731,686	+		PFLU_RS25665	0.60	-0.1
5,731,686	+		PFLU_RS25665	0.60	-0.0
5,731,686	+		PFLU_RS25665	0.60	+1.0
5,731,686	+		PFLU_RS25665	0.60	-1.5
5,731,686	+		PFLU_RS25665	0.60	-0.2
5,731,686	+		PFLU_RS25665	0.60	-0.0
5,731,686	+		PFLU_RS25665	0.60	+1.2
5,731,686	+		PFLU_RS25665	0.60	-2.7
5,731,686	+		PFLU_RS25665	0.60	+0.0
5,731,686	+		PFLU_RS25665	0.60	+3.6
5,731,687	-		PFLU_RS25665	0.60	-0.2
5,731,687	-		PFLU_RS25665	0.60	-0.1
5,731,687	-		PFLU_RS25665	0.60	-1.9
5,731,687	-		PFLU_RS25665	0.60	+1.7
5,731,687	-		PFLU_RS25665	0.60	-1.3
5,731,687	-		PFLU_RS25665	0.60	+0.1
5,731,820	+		PFLU_RS25665	0.65	-0.2
5,731,820	+		PFLU_RS25665	0.65	-2.2
5,731,820	+		PFLU_RS25665	0.65	-1.3
5,731,820	+		PFLU_RS25665	0.65	+2.0
5,731,820	+		PFLU_RS25665	0.65	-1.9
5,731,820	+		PFLU_RS25665	0.65	+0.8
5,731,821	-		PFLU_RS25665	0.65	+0.4
5,731,821	-		PFLU_RS25665	0.65	+0.8
5,731,821	-		PFLU_RS25665	0.65	-1.3
5,731,821	-		PFLU_RS25665	0.65	+0.2
5,731,821	-		PFLU_RS25665	0.65	-0.4
5,731,821	-		PFLU_RS25665	0.65	-3.0
5,731,833	+		PFLU_RS25665	0.66	-0.4
5,731,834	-		PFLU_RS25665	0.66	+0.3
5,731,834	-		PFLU_RS25665	0.66	+1.1
5,731,834	-		PFLU_RS25665	0.66	-0.6
5,731,834	-		PFLU_RS25665	0.66	-1.0
5,731,860	+		PFLU_RS25665	0.67	-0.8
5,731,860	+		PFLU_RS25665	0.67	+1.5
5,731,860	+		PFLU_RS25665	0.67	-0.9
5,731,860	+		PFLU_RS25665	0.67	-0.6
5,731,860	+		PFLU_RS25665	0.67	+0.5
5,731,860	+		PFLU_RS25665	0.67	-1.8
5,731,861	-		PFLU_RS25665	0.67	-1.2
5,731,861	-		PFLU_RS25665	0.67	-1.2
5,731,861	-		PFLU_RS25665	0.67	+0.3
5,731,861	-		PFLU_RS25665	0.67	-0.9
5,731,861	-		PFLU_RS25665	0.67	-0.7
5,731,903	+		PFLU_RS25665	0.69	-1.1
5,731,903	+		PFLU_RS25665	0.69	+0.6
5,731,915	+		PFLU_RS25665	0.69	-0.8
5,731,916	-		PFLU_RS25665	0.69	-2.2
5,731,916	-		PFLU_RS25665	0.69	-0.6
5,731,932	+		PFLU_RS25665	0.70	-1.8
5,731,932	+		PFLU_RS25665	0.70	+1.6
5,731,932	+		PFLU_RS25665	0.70	+1.2
5,731,932	+		PFLU_RS25665	0.70	-0.8
5,731,932	+		PFLU_RS25665	0.70	-0.6
5,731,933	-		PFLU_RS25665	0.70	+0.5
5,731,933	-		PFLU_RS25665	0.70	+1.4
5,731,963	+		PFLU_RS25665	0.71	-0.7
5,731,964	-		PFLU_RS25665	0.71	+0.5
5,732,049	+		PFLU_RS25665	0.75	+0.1
5,732,050	-		PFLU_RS25665	0.75	-1.3
5,732,050	-		PFLU_RS25665	0.75	+0.4
5,732,091	+		PFLU_RS25665	0.77	-0.8
5,732,145	+		PFLU_RS25665	0.79	-0.0
5,732,146	-		PFLU_RS25665	0.79	-0.3
5,732,146	-		PFLU_RS25665	0.79	-1.2
5,732,223	+		PFLU_RS25665	0.83	+0.8
5,732,223	+		PFLU_RS25665	0.83	+1.4
5,732,223	+		PFLU_RS25665	0.83	-0.9
5,732,223	+		PFLU_RS25665	0.83	-2.1
5,732,223	+		PFLU_RS25665	0.83	-0.9
5,732,224	-		PFLU_RS25665	0.83	-0.5
5,732,224	-		PFLU_RS25665	0.83	-1.0
5,732,274	+		PFLU_RS25665	0.85	-0.6
5,732,274	+		PFLU_RS25665	0.85	-0.6
5,732,274	+		PFLU_RS25665	0.85	+1.6
5,732,274	+		PFLU_RS25665	0.85	-1.9
5,732,274	+		PFLU_RS25665	0.85	+0.5
5,732,275	-		PFLU_RS25665	0.85	+0.0
5,732,275	-		PFLU_RS25665	0.85	+0.3
5,732,275	-		PFLU_RS25665	0.85	-1.2
5,732,275	-		PFLU_RS25665	0.85	-0.6
5,732,275	-		PFLU_RS25665	0.85	-1.6
5,732,275	-		PFLU_RS25665	0.85	+0.5
5,732,294	-		PFLU_RS25665	0.86	+0.7
5,732,312	-		PFLU_RS25665	0.86	-2.4
5,732,312	-		PFLU_RS25665	0.86	+0.2
5,732,439	+				+0.7
5,732,439	+				-0.4
5,732,439	+				+1.1
5,732,439	+				+0.9
5,732,439	+				-1.4
5,732,439	+				-0.6
5,732,439	+				-2.4
5,732,439	+				+0.8
5,732,439	+				-0.2
5,732,439	+				-0.1
5,732,439	+				-0.6
5,732,439	+				-0.2
5,732,439	+				+0.4
5,732,439	+				-1.5
5,732,439	+				-2.2
5,732,439	+				-0.6
5,732,439	+				+0.4
5,732,439	+				+0.1
5,732,440	-				+0.1
5,732,440	-				-0.7
5,732,440	-				-0.5
5,732,440	-				-1.8
5,732,440	-				+0.3
5,732,440	-				-0.4
5,732,440	-				+0.3
5,732,440	-				-0.0
5,732,440	-				+0.1
5,732,440	-				-0.1
5,732,440	-				-0.1
5,732,440	-				-0.8
5,732,440	-				-0.6
5,732,440	-				-1.3
5,732,440	-				-1.8
5,732,440	-				-0.5
5,732,440	-				-0.3
5,732,440	-				+0.3
5,732,440	-				+1.2
5,732,440	-				+2.3
5,732,440	-				+0.3
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5,732,440	-				-1.5
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5,733,615	+		PFLU_RS25670	0.56	+0.6
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