Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21645 and PFLU_RS21650 are separated by 11 nucleotides PFLU_RS21650 and PFLU_RS21655 are separated by 18 nucleotides PFLU_RS21655 and PFLU_RS21660 are separated by 155 nucleotides PFLU_RS21660 and PFLU_RS21665 overlap by 4 nucleotides
PFLU_RS21645: PFLU_RS21645 - chemotaxis protein CheA, at 4,878,217 to 4,880,433
_RS21645
PFLU_RS21650: PFLU_RS21650 - protein phosphatase CheZ, at 4,880,445 to 4,881,233
_RS21650
PFLU_RS21655: PFLU_RS21655 - response regulator, at 4,881,252 to 4,881,638
_RS21655
PFLU_RS21660: PFLU_RS21660 - RNA polymerase sigma factor FliA, at 4,881,794 to 4,882,534
_RS21660
PFLU_RS21665: PFLU_RS21665 - MinD/ParA family protein, at 4,882,531 to 4,883,364
_RS21665
Position (kb) 4881
4882 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4880.281 kb on + strand at 4880.281 kb on + strand at 4880.281 kb on + strand at 4880.281 kb on + strand at 4880.281 kb on + strand at 4880.281 kb on + strand at 4880.282 kb on - strand at 4880.282 kb on - strand at 4880.282 kb on - strand at 4880.287 kb on - strand at 4880.389 kb on + strand at 4880.389 kb on + strand at 4880.390 kb on - strand at 4880.446 kb on + strand at 4880.446 kb on + strand at 4880.446 kb on + strand at 4880.446 kb on + strand at 4880.447 kb on - strand at 4880.447 kb on - strand at 4880.447 kb on - strand at 4880.447 kb on - strand at 4880.447 kb on - strand at 4880.447 kb on - strand at 4880.454 kb on + strand at 4880.455 kb on - strand at 4880.455 kb on - strand at 4880.455 kb on - strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.475 kb on + strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.476 kb on - strand at 4880.495 kb on + strand at 4880.495 kb on + strand at 4880.495 kb on + strand at 4880.495 kb on + strand at 4880.495 kb on + strand at 4880.496 kb on - strand at 4880.496 kb on - strand at 4880.496 kb on - strand at 4880.496 kb on - strand at 4880.496 kb on - strand at 4880.496 kb on - strand at 4880.496 kb on - strand at 4880.496 kb on - strand at 4880.627 kb on + strand, within PFLU_RS21650 at 4880.627 kb on + strand, within PFLU_RS21650 at 4880.627 kb on + strand, within PFLU_RS21650 at 4880.627 kb on + strand, within PFLU_RS21650 at 4880.628 kb on - strand, within PFLU_RS21650 at 4880.628 kb on - strand, within PFLU_RS21650 at 4880.628 kb on - strand, within PFLU_RS21650 at 4880.628 kb on - strand, within PFLU_RS21650 at 4880.628 kb on - strand, within PFLU_RS21650 at 4880.628 kb on - strand, within PFLU_RS21650 at 4880.710 kb on + strand, within PFLU_RS21650 at 4880.711 kb on - strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.962 kb on + strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4880.963 kb on - strand, within PFLU_RS21650 at 4881.017 kb on + strand, within PFLU_RS21650 at 4881.017 kb on + strand, within PFLU_RS21650 at 4881.017 kb on + strand, within PFLU_RS21650 at 4881.018 kb on - strand, within PFLU_RS21650 at 4881.018 kb on - strand, within PFLU_RS21650 at 4881.018 kb on - strand, within PFLU_RS21650 at 4881.018 kb on - strand, within PFLU_RS21650 at 4881.018 kb on - strand, within PFLU_RS21650 at 4881.085 kb on + strand, within PFLU_RS21650 at 4881.085 kb on + strand, within PFLU_RS21650 at 4881.086 kb on - strand, within PFLU_RS21650 at 4881.124 kb on - strand, within PFLU_RS21650 at 4881.124 kb on - strand, within PFLU_RS21650 at 4881.124 kb on - strand, within PFLU_RS21650 at 4881.224 kb on + strand at 4881.225 kb on - strand at 4881.233 kb on + strand at 4881.233 kb on + strand at 4881.233 kb on + strand at 4881.233 kb on + strand at 4881.233 kb on + strand at 4881.233 kb on + strand at 4881.233 kb on + strand at 4881.234 kb on - strand at 4881.234 kb on - strand at 4881.234 kb on - strand at 4881.234 kb on - strand at 4881.234 kb on - strand at 4881.253 kb on + strand at 4881.325 kb on + strand, within PFLU_RS21655 at 4881.326 kb on - strand, within PFLU_RS21655 at 4881.409 kb on - strand, within PFLU_RS21655 at 4881.409 kb on - strand, within PFLU_RS21655 at 4881.409 kb on - strand, within PFLU_RS21655 at 4881.522 kb on - strand, within PFLU_RS21655 at 4881.659 kb on - strand at 4881.659 kb on - strand at 4881.703 kb on + strand at 4881.703 kb on + strand at 4881.703 kb on + strand at 4881.703 kb on + strand at 4881.704 kb on - strand at 4881.704 kb on - strand at 4881.704 kb on - strand at 4881.921 kb on + strand, within PFLU_RS21660 at 4881.921 kb on + strand, within PFLU_RS21660 at 4881.921 kb on + strand, within PFLU_RS21660 at 4881.922 kb on - strand, within PFLU_RS21660 at 4881.922 kb on - strand, within PFLU_RS21660 at 4881.924 kb on + strand, within PFLU_RS21660 at 4881.924 kb on + strand, within PFLU_RS21660 at 4881.925 kb on - strand, within PFLU_RS21660 at 4881.925 kb on - strand, within PFLU_RS21660 at 4881.925 kb on - strand, within PFLU_RS21660 at 4881.925 kb on - strand, within PFLU_RS21660 at 4881.925 kb on - strand, within PFLU_RS21660 at 4882.024 kb on + strand, within PFLU_RS21660 at 4882.025 kb on - strand, within PFLU_RS21660 at 4882.025 kb on - strand, within PFLU_RS21660 at 4882.025 kb on - strand, within PFLU_RS21660 at 4882.112 kb on - strand, within PFLU_RS21660 at 4882.112 kb on - strand, within PFLU_RS21660 at 4882.129 kb on - strand, within PFLU_RS21660 at 4882.131 kb on + strand, within PFLU_RS21660 at 4882.131 kb on + strand, within PFLU_RS21660 at 4882.132 kb on - strand, within PFLU_RS21660 at 4882.177 kb on + strand, within PFLU_RS21660 at 4882.234 kb on + strand, within PFLU_RS21660 at 4882.270 kb on + strand, within PFLU_RS21660 at 4882.271 kb on - strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.314 kb on + strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.315 kb on - strand, within PFLU_RS21660 at 4882.347 kb on + strand, within PFLU_RS21660 at 4882.348 kb on - strand, within PFLU_RS21660 at 4882.348 kb on - strand, within PFLU_RS21660 at 4882.348 kb on - strand, within PFLU_RS21660 at 4882.438 kb on - strand, within PFLU_RS21660 at 4882.438 kb on - strand, within PFLU_RS21660 at 4882.438 kb on - strand, within PFLU_RS21660 at 4882.464 kb on + strand at 4882.518 kb on + strand at 4882.519 kb on - strand at 4882.534 kb on + strand at 4882.534 kb on + strand at 4882.534 kb on + strand at 4882.534 kb on + strand at 4882.534 kb on + strand at 4882.534 kb on + strand at 4882.535 kb on - strand at 4882.535 kb on - strand at 4882.535 kb on - strand at 4882.535 kb on - strand at 4882.620 kb on + strand, within PFLU_RS21665 at 4882.620 kb on + strand, within PFLU_RS21665 at 4882.638 kb on + strand, within PFLU_RS21665 at 4882.638 kb on + strand, within PFLU_RS21665 at 4882.638 kb on + strand, within PFLU_RS21665
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 4,880,281 + -0.3 4,880,281 + -1.9 4,880,281 + +1.2 4,880,281 + -0.2 4,880,281 + -0.4 4,880,281 + -0.2 4,880,282 - -2.1 4,880,282 - -1.0 4,880,282 - -0.2 4,880,287 - -1.2 4,880,389 + +0.8 4,880,389 + -1.3 4,880,390 - -0.2 4,880,446 + -0.4 4,880,446 + -0.3 4,880,446 + +0.6 4,880,446 + +1.1 4,880,447 - -0.6 4,880,447 - -0.1 4,880,447 - +0.1 4,880,447 - +0.6 4,880,447 - +0.6 4,880,447 - +0.2 4,880,454 + +1.3 4,880,455 - -0.7 4,880,455 - -1.6 4,880,455 - +0.5 4,880,475 + +0.8 4,880,475 + -0.2 4,880,475 + +0.3 4,880,475 + -0.3 4,880,475 + -1.6 4,880,475 + -0.8 4,880,475 + -0.9 4,880,475 + -1.1 4,880,475 + +1.3 4,880,475 + -0.6 4,880,475 + +2.0 4,880,475 + +0.7 4,880,475 + +0.3 4,880,476 - -0.6 4,880,476 - +0.3 4,880,476 - -0.3 4,880,476 - +2.1 4,880,476 - +0.5 4,880,476 - -0.3 4,880,476 - +0.4 4,880,476 - +0.3 4,880,476 - +0.5 4,880,476 - -0.4 4,880,476 - +0.6 4,880,476 - -1.0 4,880,476 - +1.3 4,880,476 - +1.1 4,880,476 - -0.6 4,880,476 - +1.5 4,880,476 - -0.3 4,880,476 - -0.8 4,880,476 - -0.6 4,880,476 - +0.6 4,880,476 - +0.6 4,880,476 - -0.2 4,880,476 - -0.1 4,880,476 - +0.0 4,880,495 + +1.6 4,880,495 + -0.3 4,880,495 + -0.4 4,880,495 + -0.2 4,880,495 + -1.3 4,880,496 - -0.1 4,880,496 - -1.2 4,880,496 - +0.9 4,880,496 - -0.7 4,880,496 - -0.4 4,880,496 - -1.6 4,880,496 - -0.4 4,880,496 - +1.7 4,880,627 + PFLU_RS21650 0.23 -0.4 4,880,627 + PFLU_RS21650 0.23 +2.6 4,880,627 + PFLU_RS21650 0.23 -0.7 4,880,627 + PFLU_RS21650 0.23 +0.1 4,880,628 - PFLU_RS21650 0.23 -2.2 4,880,628 - PFLU_RS21650 0.23 -2.2 4,880,628 - PFLU_RS21650 0.23 +0.8 4,880,628 - PFLU_RS21650 0.23 -0.3 4,880,628 - PFLU_RS21650 0.23 -0.6 4,880,628 - PFLU_RS21650 0.23 -2.3 4,880,710 + PFLU_RS21650 0.34 -0.0 4,880,711 - PFLU_RS21650 0.34 +0.0 4,880,962 + PFLU_RS21650 0.66 +0.3 4,880,962 + PFLU_RS21650 0.66 +0.4 4,880,962 + PFLU_RS21650 0.66 -1.2 4,880,962 + PFLU_RS21650 0.66 -0.6 4,880,962 + PFLU_RS21650 0.66 -0.4 4,880,962 + PFLU_RS21650 0.66 +1.3 4,880,962 + PFLU_RS21650 0.66 +0.1 4,880,962 + PFLU_RS21650 0.66 -0.7 4,880,962 + PFLU_RS21650 0.66 -0.8 4,880,962 + PFLU_RS21650 0.66 +0.8 4,880,963 - PFLU_RS21650 0.66 +1.2 4,880,963 - PFLU_RS21650 0.66 +1.1 4,880,963 - PFLU_RS21650 0.66 -0.2 4,880,963 - PFLU_RS21650 0.66 +0.4 4,880,963 - PFLU_RS21650 0.66 -1.1 4,880,963 - PFLU_RS21650 0.66 -0.5 4,880,963 - PFLU_RS21650 0.66 -1.0 4,880,963 - PFLU_RS21650 0.66 -1.4 4,880,963 - PFLU_RS21650 0.66 +0.6 4,880,963 - PFLU_RS21650 0.66 -0.4 4,881,017 + PFLU_RS21650 0.72 +0.7 4,881,017 + PFLU_RS21650 0.72 -0.4 4,881,017 + PFLU_RS21650 0.72 +0.6 4,881,018 - PFLU_RS21650 0.73 -1.6 4,881,018 - PFLU_RS21650 0.73 +0.1 4,881,018 - PFLU_RS21650 0.73 +0.6 4,881,018 - PFLU_RS21650 0.73 -0.0 4,881,018 - PFLU_RS21650 0.73 -0.4 4,881,085 + PFLU_RS21650 0.81 +1.3 4,881,085 + PFLU_RS21650 0.81 -1.0 4,881,086 - PFLU_RS21650 0.81 +2.6 4,881,124 - PFLU_RS21650 0.86 +1.3 4,881,124 - PFLU_RS21650 0.86 -0.8 4,881,124 - PFLU_RS21650 0.86 +0.4 4,881,224 + -0.6 4,881,225 - +1.7 4,881,233 + -0.8 4,881,233 + +0.3 4,881,233 + -0.0 4,881,233 + +0.9 4,881,233 + +1.6 4,881,233 + -0.0 4,881,233 + +0.1 4,881,234 - +1.3 4,881,234 - +0.8 4,881,234 - +1.3 4,881,234 - +0.2 4,881,234 - +1.2 4,881,253 + -1.8 4,881,325 + PFLU_RS21655 0.19 -0.2 4,881,326 - PFLU_RS21655 0.19 -2.3 4,881,409 - PFLU_RS21655 0.41 -0.9 4,881,409 - PFLU_RS21655 0.41 -2.2 4,881,409 - PFLU_RS21655 0.41 -0.3 4,881,522 - PFLU_RS21655 0.70 +0.2 4,881,659 - +0.4 4,881,659 - -0.5 4,881,703 + -0.2 4,881,703 + +0.7 4,881,703 + -1.6 4,881,703 + +0.3 4,881,704 - -0.8 4,881,704 - -2.6 4,881,704 - +0.2 4,881,921 + PFLU_RS21660 0.17 +1.3 4,881,921 + PFLU_RS21660 0.17 +1.6 4,881,921 + PFLU_RS21660 0.17 +0.2 4,881,922 - PFLU_RS21660 0.17 +0.7 4,881,922 - PFLU_RS21660 0.17 -0.2 4,881,924 + PFLU_RS21660 0.18 +2.1 4,881,924 + PFLU_RS21660 0.18 -0.2 4,881,925 - PFLU_RS21660 0.18 +1.0 4,881,925 - PFLU_RS21660 0.18 +1.8 4,881,925 - PFLU_RS21660 0.18 +0.4 4,881,925 - PFLU_RS21660 0.18 +1.8 4,881,925 - PFLU_RS21660 0.18 +0.3 4,882,024 + PFLU_RS21660 0.31 +0.3 4,882,025 - PFLU_RS21660 0.31 +0.2 4,882,025 - PFLU_RS21660 0.31 -1.2 4,882,025 - PFLU_RS21660 0.31 +1.3 4,882,112 - PFLU_RS21660 0.43 +0.2 4,882,112 - PFLU_RS21660 0.43 +0.2 4,882,129 - PFLU_RS21660 0.45 -0.1 4,882,131 + PFLU_RS21660 0.45 +0.5 4,882,131 + PFLU_RS21660 0.45 +0.6 4,882,132 - PFLU_RS21660 0.46 +0.4 4,882,177 + PFLU_RS21660 0.52 +1.7 4,882,234 + PFLU_RS21660 0.59 +0.7 4,882,270 + PFLU_RS21660 0.64 +1.4 4,882,271 - PFLU_RS21660 0.64 -0.8 4,882,314 + PFLU_RS21660 0.70 +0.9 4,882,314 + PFLU_RS21660 0.70 -0.5 4,882,314 + PFLU_RS21660 0.70 +0.3 4,882,314 + PFLU_RS21660 0.70 +0.8 4,882,314 + PFLU_RS21660 0.70 +0.9 4,882,314 + PFLU_RS21660 0.70 +0.8 4,882,314 + PFLU_RS21660 0.70 +0.8 4,882,314 + PFLU_RS21660 0.70 -0.2 4,882,314 + PFLU_RS21660 0.70 -1.4 4,882,314 + PFLU_RS21660 0.70 +1.4 4,882,315 - PFLU_RS21660 0.70 +1.1 4,882,315 - PFLU_RS21660 0.70 +2.0 4,882,315 - PFLU_RS21660 0.70 -0.6 4,882,315 - PFLU_RS21660 0.70 +0.8 4,882,315 - PFLU_RS21660 0.70 +1.1 4,882,315 - PFLU_RS21660 0.70 +0.1 4,882,315 - PFLU_RS21660 0.70 +0.4 4,882,315 - PFLU_RS21660 0.70 +0.9 4,882,315 - PFLU_RS21660 0.70 +0.9 4,882,315 - PFLU_RS21660 0.70 +0.7 4,882,347 + PFLU_RS21660 0.75 -1.0 4,882,348 - PFLU_RS21660 0.75 -1.2 4,882,348 - PFLU_RS21660 0.75 -0.1 4,882,348 - PFLU_RS21660 0.75 +0.1 4,882,438 - PFLU_RS21660 0.87 -0.6 4,882,438 - PFLU_RS21660 0.87 +1.1 4,882,438 - PFLU_RS21660 0.87 +1.6 4,882,464 + +0.9 4,882,518 + +0.1 4,882,519 - +0.9 4,882,534 + +1.6 4,882,534 + +1.6 4,882,534 + +1.6 4,882,534 + +1.6 4,882,534 + +1.6 4,882,534 + -0.0 4,882,535 - +0.2 4,882,535 - +1.0 4,882,535 - -1.1 4,882,535 - +0.3 4,882,620 + PFLU_RS21665 0.11 -0.0 4,882,620 + PFLU_RS21665 0.11 -1.3 4,882,638 + PFLU_RS21665 0.13 +1.0 4,882,638 + PFLU_RS21665 0.13 -2.0 4,882,638 + PFLU_RS21665 0.13 -0.0
Or see this region's nucleotide sequence