Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS11055

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,440,478	+		PFLU_RS11050	0.57	+0.8
2,440,478	+		PFLU_RS11050	0.57	-0.9
2,440,478	+		PFLU_RS11050	0.57	-0.8
2,440,478	+		PFLU_RS11050	0.57	-0.9
2,440,479	-		PFLU_RS11050	0.57	+0.1
2,440,479	-		PFLU_RS11050	0.57	-1.1
2,440,479	-		PFLU_RS11050	0.57	+1.4
2,440,479	-		PFLU_RS11050	0.57	+0.1
2,440,479	-		PFLU_RS11050	0.57	+0.8
2,440,479	-		PFLU_RS11050	0.57	+0.2
2,440,498	-		PFLU_RS11050	0.58	-2.0
2,440,544	+		PFLU_RS11050	0.61	-0.6
2,440,544	+		PFLU_RS11050	0.61	-0.6
2,440,544	+		PFLU_RS11050	0.61	-0.1
2,440,545	-		PFLU_RS11050	0.61	+0.2
2,440,545	-		PFLU_RS11050	0.61	-2.8
2,440,545	-		PFLU_RS11050	0.61	-2.6
2,440,545	-		PFLU_RS11050	0.61	+1.4
2,440,671	+		PFLU_RS11050	0.69	-1.4
2,440,671	+		PFLU_RS11050	0.69	+0.1
2,440,671	+		PFLU_RS11050	0.69	-2.5
2,440,671	+		PFLU_RS11050	0.69	-0.1
2,440,671	+		PFLU_RS11050	0.69	+0.0
2,440,672	-		PFLU_RS11050	0.69	+0.0
2,440,672	-		PFLU_RS11050	0.69	-0.6
2,440,672	-		PFLU_RS11050	0.69	-1.2
2,440,724	-		PFLU_RS11050	0.72	-0.5
2,440,735	+		PFLU_RS11050	0.73	+0.0
2,440,984	+		PFLU_RS11050	0.89	-0.2
2,441,078	-				+1.4
2,441,083	+				+0.3
2,441,083	+				-0.7
2,441,083	+				-0.6
2,441,084	-				-1.7
2,441,084	-				+0.3
2,441,084	-				-0.0
2,441,106	+				+1.1
2,441,107	-				-1.0
2,441,107	-				+0.6
2,441,162	+				+0.4
2,441,162	+				+0.7
2,441,163	-				-0.7
2,441,163	-				+0.4
2,441,163	-				+0.1
2,441,180	+				+0.8
2,441,180	+				+0.7
2,441,181	-				-0.6
2,441,181	-				+0.6
2,441,188	+				+0.8
2,441,188	+				-0.8
2,441,208	+				+0.1
2,441,208	+				-0.5
2,441,208	+				+0.1
2,441,209	-				+0.9
2,441,211	+				+0.7
2,441,211	+				+2.0
2,441,211	+				-0.5
2,441,212	-				-0.1
2,441,212	-				-2.6
2,441,212	-				-0.4
2,441,225	+				-0.7
2,441,226	-				-0.4
2,441,252	+				+0.3
2,441,252	+				+2.4
2,441,252	+				+0.6
2,441,252	+				-2.5
2,441,252	+				+0.3
2,441,252	+				+0.5
2,441,252	+				-2.7
2,441,253	-				-0.1
2,441,253	-				-0.9
2,441,253	-				-0.6
2,441,253	-				-0.6
2,441,253	-				+2.3
2,441,253	-				-0.2
2,441,253	-				-0.6
2,441,253	-				-0.6
2,441,253	-				-2.1
2,441,253	-				+0.3
2,441,293	+				-0.1
2,441,293	+				-0.6
2,441,293	+				+0.2
2,441,294	-				+1.4
2,441,294	-				-0.6
2,441,294	-				+0.4
2,441,418	+				+0.9
2,441,418	+				+0.6
2,441,419	-				+0.6
2,441,419	-				-0.6
2,441,419	-				-0.4
2,441,464	+		PFLU_RS11055	0.17	+0.0
2,441,464	+		PFLU_RS11055	0.17	-0.7
2,441,561	+		PFLU_RS11055	0.70	-0.8
2,441,641	+				+0.4
2,441,641	+				-0.3
2,441,641	+				-1.4
2,441,641	+				-1.1
2,441,641	+				+1.2
2,441,641	+				+0.4
2,441,642	-				-1.4
2,441,642	-				-0.4
2,441,642	-				-1.1
2,441,642	-				+0.8
2,441,642	-				-0.5
2,441,666	+				-1.4
2,441,666	+				+1.8
2,441,666	+				+0.3
2,441,666	+				-1.0
2,441,666	+				+0.4
2,441,667	-				-1.7
2,441,667	-				+2.0
2,441,667	-				-0.4
2,441,667	-				+0.4
2,441,667	-				-0.1
2,441,667	-				-1.1
2,441,667	-				+0.9
2,441,699	-				-1.7
2,441,699	-				-0.0
2,441,699	-				+0.1
2,441,742	+				+1.2
2,441,745	+				+1.2
2,441,746	-				-0.0
2,441,746	-				-0.7
2,441,750	+				-0.6
2,441,753	+				+0.8
2,441,753	+				+0.4
2,441,753	+				-0.2
2,441,758	+				-0.0
2,441,758	+				-1.0
2,441,758	+				+0.4
2,441,758	+				+0.4
2,441,758	+				-0.4
2,441,758	+				-0.5
2,441,759	-				-0.1
2,441,759	-				-1.3
2,441,759	-				+0.2
2,441,759	-				-0.1
2,441,778	+				-3.1
2,441,779	-				+0.9
2,441,905	+				-0.7
2,441,905	+				+2.3
2,441,905	+				-0.8
2,441,905	+				-1.1
2,441,906	-				-0.8
2,441,906	-				+1.9
2,441,941	+				-0.2
2,441,941	+				-0.3
2,441,942	-				+0.7
2,441,942	-				+1.7
2,441,942	-				-0.1
2,441,942	-				+0.2
2,441,942	-				+1.0
2,441,972	+				-0.4
2,441,972	+				+0.3
2,441,973	-				+1.1
2,442,030	+				+0.2
2,442,030	+				+2.0
2,442,031	-				+0.8
2,442,031	-				+0.1
2,442,053	+				-0.9
2,442,053	+				+0.1
2,442,053	+				-1.3
2,442,054	-				+1.1
2,442,054	-				+0.4
2,442,054	-				+0.0
2,442,054	-				-0.6
2,442,072	+				+0.0
2,442,072	+				+0.6
2,442,073	-				-1.0
2,442,073	-				+0.6
2,442,073	-				-2.1
2,442,094	+				-0.1
2,442,095	-				+1.4
2,442,095	-				-1.0
2,442,095	-				+0.0
2,442,095	-				+0.6
2,442,109	+				+0.5
2,442,109	+				-0.0
2,442,110	-				-0.4
2,442,110	-				-0.1
2,442,164	-				+0.2
2,442,164	-				+0.4
2,442,164	-				+0.9
2,442,164	-				+1.4
2,442,277	-				-1.4
2,442,287	+				+0.4
2,442,288	-				-1.7
2,442,288	-				-0.6
2,442,298	+				+0.0
2,442,299	-				+0.7
2,442,299	-				+0.7
2,442,299	-				+0.9
2,442,322	-				+1.6
2,442,338	+				-0.0
2,442,338	+				+1.2
2,442,338	+				-1.8
2,442,339	-				-1.1
2,442,339	-				-1.9
2,442,380	+				+0.3
2,442,380	+				+1.0
2,442,381	-				+1.4
2,442,386	+				+0.7
2,442,386	+				+0.3
2,442,387	-				-0.6
2,442,393	+				-0.8
2,442,393	+				+0.1
2,442,393	+				-0.1
2,442,393	+				+0.6
2,442,393	+				+2.2
2,442,394	-				+0.7
2,442,437	+				+0.4
2,442,437	+				+0.4
2,442,438	-				+0.3
2,442,543	+		PFLU_RS11060	0.21	-1.5
2,442,543	+		PFLU_RS11060	0.21	-0.5
2,442,543	+		PFLU_RS11060	0.21	-0.1
2,442,544	-		PFLU_RS11060	0.21	+0.6
2,442,544	-		PFLU_RS11060	0.21	-1.6
2,442,544	-		PFLU_RS11060	0.21	-1.6