Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10300

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,270,571	+				-1.1
2,270,571	+				-0.4
2,270,572	-				-2.0
2,270,572	-				+0.6
2,270,572	-				+0.6
2,270,591	+				+1.1
2,270,591	+				-1.4
2,270,592	-				-0.7
2,270,592	-				-0.8
2,270,595	+				-1.3
2,270,595	+				+0.1
2,270,595	+				+0.2
2,270,595	+				-0.2
2,270,595	+				-1.3
2,270,596	-				-0.6
2,270,596	-				+0.7
2,270,596	-				-2.9
2,270,596	-				+1.1
2,270,596	-				+0.4
2,270,596	-				+1.5
2,270,596	-				-0.3
2,270,596	-				-0.4
2,270,660	-				+0.6
2,270,692	-				+0.2
2,270,761	+				+0.9
2,270,762	-				-2.9
2,270,762	-				+1.2
2,270,762	-				+0.7
2,270,763	+				+0.3
2,270,790	+				-1.3
2,270,791	-				+1.8
2,270,817	+				-0.2
2,270,818	-				-0.1
2,270,818	-				+0.6
2,270,818	-				+0.6
2,270,818	-				+1.1
2,270,818	-				+0.1
2,270,818	-				+0.1
2,270,820	-				+0.2
2,270,830	+				-2.1
2,270,831	-				+0.9
2,270,831	-				-0.2
2,270,831	-				+0.9
2,270,831	-				+0.9
2,270,831	-				+0.8
2,270,849	-				-0.1
2,270,851	-				+0.0
2,270,859	+				+0.1
2,270,886	+				-0.3
2,270,905	-		PFLU_RS10295	0.10	+0.2
2,270,949	+		PFLU_RS10295	0.17	+1.1
2,271,079	-		PFLU_RS10295	0.35	-1.1
2,271,079	-		PFLU_RS10295	0.35	-0.5
2,271,181	-		PFLU_RS10295	0.50	-0.4
2,271,237	+		PFLU_RS10295	0.58	-1.5
2,271,238	-		PFLU_RS10295	0.58	+1.3
2,271,238	-		PFLU_RS10295	0.58	+1.2
2,271,356	+		PFLU_RS10295	0.74	+1.5
2,271,357	-		PFLU_RS10295	0.75	-1.5
2,271,357	-		PFLU_RS10295	0.75	-1.8
2,271,357	-		PFLU_RS10295	0.75	+0.3
2,271,434	-		PFLU_RS10295	0.86	-1.5
2,271,507	+				+0.2
2,271,508	-				+1.3
2,271,516	+				-0.8
2,271,516	+				-0.1
2,271,591	-				+0.2
2,271,642	+				+0.4
2,271,642	+				+0.6
2,271,642	+				+0.4
2,271,642	+				+0.6
2,271,642	+				+0.1
2,271,643	-				+1.6
2,271,643	-				+1.7
2,271,651	+				+1.4
2,271,652	-				+0.5
2,271,675	+				+1.5
2,271,689	+		PFLU_RS10300	0.10	-0.4
2,271,690	-		PFLU_RS10300	0.11	+0.5
2,271,693	+		PFLU_RS10300	0.11	+2.5
2,271,693	+		PFLU_RS10300	0.11	+0.9
2,271,693	+		PFLU_RS10300	0.11	+0.7
2,271,693	+		PFLU_RS10300	0.11	+0.9
2,271,693	+		PFLU_RS10300	0.11	+0.4
2,271,693	+		PFLU_RS10300	0.11	-1.1
2,271,693	+		PFLU_RS10300	0.11	+1.1
2,271,693	+		PFLU_RS10300	0.11	+0.4
2,271,693	+		PFLU_RS10300	0.11	-1.0
2,271,693	+		PFLU_RS10300	0.11	+0.9
2,271,693	+		PFLU_RS10300	0.11	+1.3
2,271,693	+		PFLU_RS10300	0.11	-0.1
2,271,693	+		PFLU_RS10300	0.11	-0.0
2,271,693	+		PFLU_RS10300	0.11	+0.6
2,271,693	+		PFLU_RS10300	0.11	+0.6
2,271,693	+		PFLU_RS10300	0.11	-0.0
2,271,693	+		PFLU_RS10300	0.11	+0.6
2,271,693	+		PFLU_RS10300	0.11	-0.3
2,271,693	+		PFLU_RS10300	0.11	-1.2
2,271,693	+		PFLU_RS10300	0.11	+1.5
2,271,693	+		PFLU_RS10300	0.11	+1.3
2,271,694	-		PFLU_RS10300	0.11	-0.5
2,271,694	-		PFLU_RS10300	0.11	+0.4
2,271,694	-		PFLU_RS10300	0.11	+1.5
2,271,694	-		PFLU_RS10300	0.11	+0.7
2,271,694	-		PFLU_RS10300	0.11	+0.5
2,271,694	-		PFLU_RS10300	0.11	+2.0
2,271,694	-		PFLU_RS10300	0.11	+0.5
2,271,694	-		PFLU_RS10300	0.11	+1.4
2,271,694	-		PFLU_RS10300	0.11	+0.2
2,271,694	-		PFLU_RS10300	0.11	+0.7
2,271,694	-		PFLU_RS10300	0.11	+0.0
2,271,694	-		PFLU_RS10300	0.11	-0.1
2,271,694	-		PFLU_RS10300	0.11	+1.3
2,271,694	-		PFLU_RS10300	0.11	+1.2
2,271,694	-		PFLU_RS10300	0.11	+0.5
2,271,694	-		PFLU_RS10300	0.11	+0.1
2,271,694	-		PFLU_RS10300	0.11	+0.4
2,271,695	+		PFLU_RS10300	0.11	+1.9
2,271,697	+		PFLU_RS10300	0.11	-0.0
2,271,697	+		PFLU_RS10300	0.11	+1.2
2,271,697	+		PFLU_RS10300	0.11	-0.3
2,271,697	+		PFLU_RS10300	0.11	-1.1
2,271,697	+		PFLU_RS10300	0.11	+0.8
2,271,697	+		PFLU_RS10300	0.11	-0.1
2,271,697	+		PFLU_RS10300	0.11	-1.2
2,271,697	+		PFLU_RS10300	0.11	-0.3
2,271,697	+		PFLU_RS10300	0.11	-1.3
2,271,697	+		PFLU_RS10300	0.11	+1.3
2,271,698	-		PFLU_RS10300	0.11	+0.1
2,271,698	-		PFLU_RS10300	0.11	-0.5
2,271,698	-		PFLU_RS10300	0.11	-1.7
2,271,698	-		PFLU_RS10300	0.11	+0.9
2,271,698	-		PFLU_RS10300	0.11	-1.2
2,271,698	-		PFLU_RS10300	0.11	+0.3
2,271,698	-		PFLU_RS10300	0.11	-0.7
2,271,698	-		PFLU_RS10300	0.11	+1.4
2,271,698	-		PFLU_RS10300	0.11	+0.1
2,271,698	-		PFLU_RS10300	0.11	+1.8
2,271,698	-		PFLU_RS10300	0.11	-1.1
2,271,698	-		PFLU_RS10300	0.11	+0.5
2,271,698	-		PFLU_RS10300	0.11	+0.2
2,271,798	+		PFLU_RS10300	0.19	+0.2
2,271,798	+		PFLU_RS10300	0.19	-0.3
2,271,799	-		PFLU_RS10300	0.19	-0.7
2,271,799	-		PFLU_RS10300	0.19	+0.3
2,271,799	-		PFLU_RS10300	0.19	-0.1
2,271,799	-		PFLU_RS10300	0.19	-1.1
2,271,799	-		PFLU_RS10300	0.19	+0.4
2,271,858	+		PFLU_RS10300	0.24	+0.7
2,271,858	+		PFLU_RS10300	0.24	-1.1
2,271,858	+		PFLU_RS10300	0.24	-0.3
2,271,858	+		PFLU_RS10300	0.24	+0.9
2,271,858	+		PFLU_RS10300	0.24	+0.1
2,271,858	+		PFLU_RS10300	0.24	+0.1
2,271,858	+		PFLU_RS10300	0.24	+1.2
2,271,858	+		PFLU_RS10300	0.24	+1.4
2,271,858	+		PFLU_RS10300	0.24	-1.4
2,271,859	-		PFLU_RS10300	0.24	+1.6
2,271,859	-		PFLU_RS10300	0.24	-0.1
2,271,859	-		PFLU_RS10300	0.24	-0.5
2,271,859	-		PFLU_RS10300	0.24	+0.5
2,271,859	-		PFLU_RS10300	0.24	+0.2
2,271,859	-		PFLU_RS10300	0.24	+0.2
2,272,097	+		PFLU_RS10300	0.44	-0.5
2,272,098	-		PFLU_RS10300	0.44	+0.7
2,272,098	-		PFLU_RS10300	0.44	-0.5
2,272,385	-		PFLU_RS10300	0.67	+0.3
2,272,458	+		PFLU_RS10300	0.73	+0.4
2,272,458	+		PFLU_RS10300	0.73	+0.6
2,272,458	+		PFLU_RS10300	0.73	+0.4
2,272,459	-		PFLU_RS10300	0.73	-0.2
2,272,511	+		PFLU_RS10300	0.78	+3.5
2,272,584	+		PFLU_RS10300	0.84	+0.0
2,272,585	-		PFLU_RS10300	0.84	-0.7
2,272,585	-		PFLU_RS10300	0.84	-2.1
2,272,585	-		PFLU_RS10300	0.84	+0.0
2,272,590	+		PFLU_RS10300	0.84	+1.2
2,272,590	+		PFLU_RS10300	0.84	+1.2
2,272,590	+		PFLU_RS10300	0.84	+0.3
2,272,590	+		PFLU_RS10300	0.84	+0.8
2,272,591	-		PFLU_RS10300	0.84	+0.8
2,272,591	-		PFLU_RS10300	0.84	+0.3
2,272,591	-		PFLU_RS10300	0.84	+0.7
2,272,591	-		PFLU_RS10300	0.84	+0.1
2,272,591	-		PFLU_RS10300	0.84	+0.6
2,272,591	-		PFLU_RS10300	0.84	+0.7
2,272,591	-		PFLU_RS10300	0.84	+1.0
2,272,591	-		PFLU_RS10300	0.84	+0.4
2,272,591	-		PFLU_RS10300	0.84	+0.7
2,272,599	+		PFLU_RS10300	0.85	-0.7
2,272,599	+		PFLU_RS10300	0.85	-0.1
2,272,599	+		PFLU_RS10300	0.85	-0.1
2,272,599	+		PFLU_RS10300	0.85	-0.3
2,272,599	+		PFLU_RS10300	0.85	+1.0
2,272,600	-		PFLU_RS10300	0.85	+0.7
2,272,600	-		PFLU_RS10300	0.85	+1.5
2,272,600	-		PFLU_RS10300	0.85	-0.6
2,272,600	-		PFLU_RS10300	0.85	+0.7
2,272,698	+				+2.2
2,272,699	-				-1.7
2,272,891	+		PFLU_RS10305	0.15	+0.3
2,272,892	-		PFLU_RS10305	0.15	+1.5
2,272,892	-		PFLU_RS10305	0.15	+0.2
2,272,955	+		PFLU_RS10305	0.24	-0.9
2,272,955	+		PFLU_RS10305	0.24	-0.5
2,272,955	+		PFLU_RS10305	0.24	-0.3
2,272,955	+		PFLU_RS10305	0.24	-0.8
2,272,955	+		PFLU_RS10305	0.24	+0.6
2,272,956	-		PFLU_RS10305	0.24	-0.2
2,272,956	-		PFLU_RS10305	0.24	-0.1
2,272,956	-		PFLU_RS10305	0.24	+0.6
2,272,956	-		PFLU_RS10305	0.24	+2.4
2,272,963	+		PFLU_RS10305	0.25	-2.4
2,272,964	-		PFLU_RS10305	0.25	-0.2
2,272,964	-		PFLU_RS10305	0.25	+0.5
2,272,977	+		PFLU_RS10305	0.27	-0.1
2,272,977	+		PFLU_RS10305	0.27	-0.7
2,272,978	-		PFLU_RS10305	0.27	+0.6
2,272,978	-		PFLU_RS10305	0.27	-1.9
2,272,978	-		PFLU_RS10305	0.27	-0.4
2,273,018	-		PFLU_RS10305	0.33	-1.9
2,273,081	-		PFLU_RS10305	0.41	+0.6
2,273,081	-		PFLU_RS10305	0.41	-0.8
2,273,081	-		PFLU_RS10305	0.41	-0.0
2,273,114	-		PFLU_RS10305	0.46	+0.4
2,273,219	+		PFLU_RS10305	0.60	-3.0
2,273,219	+		PFLU_RS10305	0.60	+1.3
2,273,219	+		PFLU_RS10305	0.60	+0.6
2,273,220	-		PFLU_RS10305	0.60	+1.7
2,273,220	-		PFLU_RS10305	0.60	-0.3
2,273,220	-		PFLU_RS10305	0.60	+0.1
2,273,220	-		PFLU_RS10305	0.60	-0.5
2,273,220	-		PFLU_RS10305	0.60	+0.3
2,273,220	-		PFLU_RS10305	0.60	+0.9
2,273,228	-		PFLU_RS10305	0.61	-0.8
2,273,282	+		PFLU_RS10305	0.69	-1.1
2,273,282	+		PFLU_RS10305	0.69	-0.7
2,273,282	+		PFLU_RS10305	0.69	+0.0
2,273,282	+		PFLU_RS10305	0.69	-1.4
2,273,283	-		PFLU_RS10305	0.69	+1.0
2,273,283	-		PFLU_RS10305	0.69	+0.6
2,273,389	+		PFLU_RS10305	0.83	-1.8
2,273,389	+		PFLU_RS10305	0.83	-1.1
2,273,466	-				+0.5
2,273,520	-				+1.1
2,273,596	-		PFLU_RS10310	0.10	-0.4
2,273,717	+		PFLU_RS10310	0.27	-0.4
2,273,718	-		PFLU_RS10310	0.27	-0.4
2,273,747	+		PFLU_RS10310	0.31	+0.0
2,273,747	+		PFLU_RS10310	0.31	+0.6
2,273,748	-		PFLU_RS10310	0.31	+1.9
2,273,748	-		PFLU_RS10310	0.31	+0.4
2,273,778	+		PFLU_RS10310	0.36	-0.7