Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07130

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,589,929	+		PFLU_RS07125	0.79	-0.5
1,589,929	+		PFLU_RS07125	0.79	-1.4
1,589,929	+		PFLU_RS07125	0.79	+0.9
1,589,929	+		PFLU_RS07125	0.79	-0.7
1,589,930	-		PFLU_RS07125	0.79	+0.6
1,589,930	-		PFLU_RS07125	0.79	+0.1
1,589,930	-		PFLU_RS07125	0.79	+0.9
1,589,930	-		PFLU_RS07125	0.79	-0.3
1,589,930	-		PFLU_RS07125	0.79	+1.2
1,589,973	+		PFLU_RS07125	0.81	+0.4
1,589,974	-		PFLU_RS07125	0.81	+0.3
1,589,974	-		PFLU_RS07125	0.81	+0.3
1,589,993	-		PFLU_RS07125	0.82	-1.8
1,589,993	-		PFLU_RS07125	0.82	-0.9
1,590,046	+		PFLU_RS07125	0.84	+0.5
1,590,046	+		PFLU_RS07125	0.84	+1.4
1,590,046	+		PFLU_RS07125	0.84	+0.7
1,590,047	-		PFLU_RS07125	0.84	-1.4
1,590,047	-		PFLU_RS07125	0.84	-0.3
1,590,047	-		PFLU_RS07125	0.84	-0.9
1,590,047	-		PFLU_RS07125	0.84	+0.5
1,590,047	-		PFLU_RS07125	0.84	-0.2
1,590,047	-		PFLU_RS07125	0.84	-1.5
1,590,047	-		PFLU_RS07125	0.84	-0.5
1,590,126	+		PFLU_RS07125	0.88	+0.5
1,590,126	+		PFLU_RS07125	0.88	+1.9
1,590,126	+		PFLU_RS07125	0.88	-0.7
1,590,127	-		PFLU_RS07125	0.88	-0.3
1,590,127	-		PFLU_RS07125	0.88	-0.1
1,590,163	+		PFLU_RS07125	0.90	+2.7
1,590,163	+		PFLU_RS07125	0.90	+0.5
1,590,163	+		PFLU_RS07125	0.90	-0.3
1,590,164	-		PFLU_RS07125	0.90	+1.8
1,590,164	-		PFLU_RS07125	0.90	+0.3
1,590,164	-		PFLU_RS07125	0.90	-0.3
1,590,164	-		PFLU_RS07125	0.90	-0.2
1,590,274	-				+1.3
1,590,376	+				+0.1
1,590,385	+				+0.4
1,590,386	-				+2.1
1,590,386	-				+0.2
1,590,386	-				-2.6
1,590,386	-				-0.3
1,590,404	-				-0.1
1,590,404	-				-0.5
1,590,491	+				+1.3
1,590,491	+				+0.0
1,590,518	+				-2.0
1,590,518	+				-0.4
1,590,519	-				-0.0
1,590,519	-				-0.5
1,590,519	-				+0.2
1,590,525	-				+1.1
1,590,533	+				-1.5
1,590,539	+				+0.3
1,590,540	-				-1.6
1,590,540	-				-2.0
1,590,540	-				-0.4
1,590,553	+				-1.5
1,590,553	+				+0.7
1,590,553	+				-0.3
1,590,553	+				-1.3
1,590,554	-				-0.5
1,590,556	+				+0.1
1,590,676	+				+0.1
1,590,677	-				+0.3
1,590,690	+				+0.1
1,590,690	+				+0.0
1,590,690	+				+0.4
1,590,690	+				+1.0
1,590,691	-				+1.0
1,590,693	+				-0.7
1,590,693	+				-1.1
1,590,693	+				+0.2
1,590,694	-				+0.1
1,590,694	-				-1.0
1,590,694	-				+0.6
1,590,694	-				-1.1
1,590,694	-				-0.4
1,590,694	-				+1.6
1,590,706	-				+0.1
1,590,790	+				-0.4
1,590,798	+				+0.7
1,590,798	+				-0.7
1,590,799	-				-1.1
1,590,799	-				-0.4
1,590,878	+				+0.1
1,590,878	+				-0.5
1,590,878	+				+0.6
1,590,878	+				+1.6
1,590,878	+				-0.4
1,590,878	+				-0.4
1,590,878	+				+0.6
1,590,878	+				-1.0
1,590,878	+				+0.7
1,590,878	+				+1.4
1,590,878	+				-0.7
1,590,879	-				-1.5
1,590,879	-				-0.2
1,590,879	-				+1.1
1,590,879	-				+0.6
1,590,879	-				+1.6
1,590,937	+				+1.6
1,590,937	+				+0.1
1,590,937	+				+0.0
1,590,938	-				-0.7
1,590,938	-				-0.2
1,590,967	+				+0.3
1,590,968	-				-1.2
1,590,968	-				+0.2
1,590,970	+				-0.4
1,590,970	+				-0.2
1,590,971	-				-1.4
1,590,971	-				-0.6
1,590,971	-				+1.0
1,590,982	-				-1.6
1,590,991	+				-0.9
1,590,991	+				-0.1
1,590,992	-				-0.4
1,590,992	-				+0.0
1,591,063	+				-0.4
1,591,064	-				-1.7
1,591,064	-				-0.4
1,591,100	+				+0.7
1,591,100	+				+1.1
1,591,106	+				+1.4
1,591,107	-				+0.3
1,591,107	-				+1.3
1,591,107	-				+2.0
1,591,107	-				+0.3
1,591,107	-				+0.3
1,591,115	+				+1.1
1,591,177	+				+0.8
1,591,234	-		PFLU_RS07130	0.10	+0.3
1,591,234	-		PFLU_RS07130	0.10	+0.5
1,591,356	+		PFLU_RS07130	0.14	-0.6
1,591,356	+		PFLU_RS07130	0.14	-2.2
1,591,356	+		PFLU_RS07130	0.14	+0.5
1,591,357	-		PFLU_RS07130	0.14	+0.5
1,591,357	-		PFLU_RS07130	0.14	+0.6
1,591,451	+		PFLU_RS07130	0.17	+0.0
1,591,451	+		PFLU_RS07130	0.17	+0.2
1,591,451	+		PFLU_RS07130	0.17	+0.5
1,591,451	+		PFLU_RS07130	0.17	+0.0
1,591,452	-		PFLU_RS07130	0.17	-0.7
1,591,452	-		PFLU_RS07130	0.17	-0.4
1,591,452	-		PFLU_RS07130	0.17	-0.8
1,591,558	+		PFLU_RS07130	0.20	-0.9
1,591,558	+		PFLU_RS07130	0.20	+0.0
1,591,558	+		PFLU_RS07130	0.20	+0.3
1,591,559	-		PFLU_RS07130	0.20	+2.3
1,591,639	+		PFLU_RS07130	0.23	-1.0
1,591,639	+		PFLU_RS07130	0.23	+0.5
1,591,639	+		PFLU_RS07130	0.23	+0.5
1,591,639	+		PFLU_RS07130	0.23	-1.4
1,591,639	+		PFLU_RS07130	0.23	-1.1
1,591,639	+		PFLU_RS07130	0.23	+1.0
1,591,639	+		PFLU_RS07130	0.23	+1.2
1,591,639	+		PFLU_RS07130	0.23	+0.6
1,591,639	+		PFLU_RS07130	0.23	-0.8
1,591,639	+		PFLU_RS07130	0.23	-0.9
1,591,639	+		PFLU_RS07130	0.23	+0.5
1,591,640	-		PFLU_RS07130	0.23	-0.2
1,591,640	-		PFLU_RS07130	0.23	-1.5
1,591,640	-		PFLU_RS07130	0.23	+0.0
1,591,640	-		PFLU_RS07130	0.23	-0.7
1,591,782	+		PFLU_RS07130	0.27	+0.2
1,591,783	-		PFLU_RS07130	0.27	+0.6
1,591,783	-		PFLU_RS07130	0.27	+0.3
1,591,809	+		PFLU_RS07130	0.28	-3.4
1,591,809	+		PFLU_RS07130	0.28	+0.6
1,591,809	+		PFLU_RS07130	0.28	+0.7
1,591,810	-		PFLU_RS07130	0.28	+0.5
1,591,855	+		PFLU_RS07130	0.30	+0.3
1,591,856	-		PFLU_RS07130	0.30	-0.1
1,592,040	+		PFLU_RS07130	0.36	-2.2
1,592,041	-		PFLU_RS07130	0.36	-0.2
1,592,140	+		PFLU_RS07130	0.39	-0.9
1,592,140	+		PFLU_RS07130	0.39	-0.5
1,592,141	-		PFLU_RS07130	0.39	+1.1
1,592,166	+		PFLU_RS07130	0.40	+0.1
1,592,166	+		PFLU_RS07130	0.40	-0.9
1,592,166	+		PFLU_RS07130	0.40	+0.2
1,592,166	+		PFLU_RS07130	0.40	-0.0
1,592,166	+		PFLU_RS07130	0.40	-1.3
1,592,166	+		PFLU_RS07130	0.40	+0.5
1,592,166	+		PFLU_RS07130	0.40	-0.4
1,592,166	+		PFLU_RS07130	0.40	-0.4
1,592,166	+		PFLU_RS07130	0.40	-0.7
1,592,167	-		PFLU_RS07130	0.40	-1.1
1,592,167	-		PFLU_RS07130	0.40	-2.0
1,592,167	-		PFLU_RS07130	0.40	+0.3
1,592,176	+		PFLU_RS07130	0.40	-0.5
1,592,354	+		PFLU_RS07130	0.46	+0.3
1,592,354	+		PFLU_RS07130	0.46	+0.1
1,592,354	+		PFLU_RS07130	0.46	+2.4
1,592,354	+		PFLU_RS07130	0.46	-0.5
1,592,354	+		PFLU_RS07130	0.46	+0.7
1,592,355	-		PFLU_RS07130	0.46	-0.1
1,592,355	-		PFLU_RS07130	0.46	+0.5
1,592,355	-		PFLU_RS07130	0.46	-0.3
1,592,355	-		PFLU_RS07130	0.46	+1.0
1,592,355	-		PFLU_RS07130	0.46	-0.1
1,592,358	+		PFLU_RS07130	0.46	+0.8
1,592,358	+		PFLU_RS07130	0.46	+0.8
1,592,358	+		PFLU_RS07130	0.46	-0.3
1,592,358	+		PFLU_RS07130	0.46	-0.7
1,592,358	+		PFLU_RS07130	0.46	-2.2
1,592,359	-		PFLU_RS07130	0.46	+1.1
1,592,359	-		PFLU_RS07130	0.46	+0.6
1,592,400	-		PFLU_RS07130	0.47	+0.2
1,592,421	+		PFLU_RS07130	0.48	+0.1
1,592,421	+		PFLU_RS07130	0.48	+0.2
1,592,421	+		PFLU_RS07130	0.48	+0.8
1,592,421	+		PFLU_RS07130	0.48	-0.1
1,592,422	-		PFLU_RS07130	0.48	+0.1
1,592,422	-		PFLU_RS07130	0.48	-2.4
1,592,422	-		PFLU_RS07130	0.48	-0.4
1,592,422	-		PFLU_RS07130	0.48	+0.8
1,592,444	+		PFLU_RS07130	0.48	-0.5
1,592,444	+		PFLU_RS07130	0.48	-0.5
1,592,444	+		PFLU_RS07130	0.48	+1.4
1,592,444	+		PFLU_RS07130	0.48	+0.4
1,592,444	+		PFLU_RS07130	0.48	+0.6
1,592,444	+		PFLU_RS07130	0.48	-0.6
1,592,444	+		PFLU_RS07130	0.48	-0.1
1,592,445	-		PFLU_RS07130	0.48	-0.1
1,592,445	-		PFLU_RS07130	0.48	-1.7
1,592,445	-		PFLU_RS07130	0.48	-1.0
1,592,445	-		PFLU_RS07130	0.48	+0.1
1,592,445	-		PFLU_RS07130	0.48	+0.3
1,592,445	-		PFLU_RS07130	0.48	-1.4
1,592,445	-		PFLU_RS07130	0.48	-0.2
1,592,459	-		PFLU_RS07130	0.49	+0.3
1,592,471	-		PFLU_RS07130	0.49	+0.1
1,592,472	+		PFLU_RS07130	0.49	-0.7
1,592,472	+		PFLU_RS07130	0.49	-0.4
1,592,472	+		PFLU_RS07130	0.49	+0.3
1,592,472	+		PFLU_RS07130	0.49	-0.3
1,592,472	+		PFLU_RS07130	0.49	+0.2
1,592,473	-		PFLU_RS07130	0.49	+0.2
1,592,473	-		PFLU_RS07130	0.49	+0.7
1,592,473	-		PFLU_RS07130	0.49	-0.9
1,592,473	-		PFLU_RS07130	0.49	+0.3
1,592,473	-		PFLU_RS07130	0.49	+0.4
1,592,473	-		PFLU_RS07130	0.49	+0.8
1,592,473	-		PFLU_RS07130	0.49	-0.3
1,592,473	-		PFLU_RS07130	0.49	-0.9
1,592,473	-		PFLU_RS07130	0.49	+1.3
1,592,509	+		PFLU_RS07130	0.50	+1.3
1,592,554	+		PFLU_RS07130	0.52	+0.5
1,592,554	+		PFLU_RS07130	0.52	+0.0
1,592,554	+		PFLU_RS07130	0.52	+1.6
1,592,580	+		PFLU_RS07130	0.53	+0.3
1,592,580	+		PFLU_RS07130	0.53	+0.2
1,592,581	-		PFLU_RS07130	0.53	-1.1
1,592,581	-		PFLU_RS07130	0.53	+2.4
1,592,590	+		PFLU_RS07130	0.53	+1.2
1,592,597	-		PFLU_RS07130	0.53	-0.1
1,592,601	+		PFLU_RS07130	0.53	-2.3
1,592,652	+		PFLU_RS07130	0.55	-0.0
1,592,652	+		PFLU_RS07130	0.55	-0.0
1,592,653	-		PFLU_RS07130	0.55	-0.3
1,592,653	-		PFLU_RS07130	0.55	-0.2
1,592,653	-		PFLU_RS07130	0.55	+0.6
1,592,653	-		PFLU_RS07130	0.55	+0.2
1,592,653	-		PFLU_RS07130	0.55	+1.2
1,592,653	-		PFLU_RS07130	0.55	-0.5
1,592,656	+		PFLU_RS07130	0.55	+0.4
1,592,656	+		PFLU_RS07130	0.55	+1.0
1,592,657	-		PFLU_RS07130	0.55	+1.2
1,592,657	-		PFLU_RS07130	0.55	-0.2
1,592,657	-		PFLU_RS07130	0.55	+0.1
1,592,684	-		PFLU_RS07130	0.56	-0.2
1,592,730	+		PFLU_RS07130	0.57	-0.6
1,592,731	-		PFLU_RS07130	0.57	+0.1
1,592,919	+		PFLU_RS07130	0.63	-0.3
1,592,919	+		PFLU_RS07130	0.63	+0.4
1,592,920	-		PFLU_RS07130	0.63	+0.0
1,593,159	+		PFLU_RS07130	0.71	+0.2
1,593,159	+		PFLU_RS07130	0.71	-2.4
1,593,159	+		PFLU_RS07130	0.71	-0.6
1,593,160	-		PFLU_RS07130	0.71	+0.3
1,593,296	+		PFLU_RS07130	0.75	-0.0
1,593,296	+		PFLU_RS07130	0.75	+0.3
1,593,297	-		PFLU_RS07130	0.75	-0.4
1,593,375	+		PFLU_RS07130	0.78	+1.6
1,593,376	-		PFLU_RS07130	0.78	+0.0
1,593,376	-		PFLU_RS07130	0.78	+2.8
1,593,378	+		PFLU_RS07130	0.78	-0.1
1,593,379	-		PFLU_RS07130	0.78	+0.3
1,593,395	+		PFLU_RS07130	0.78	-2.1
1,593,395	+		PFLU_RS07130	0.78	-1.0
1,593,396	-		PFLU_RS07130	0.78	+1.3
1,593,520	+		PFLU_RS07130	0.82	-0.3
1,593,521	-		PFLU_RS07130	0.82	-1.4
1,593,555	-		PFLU_RS07130	0.84	-0.7
1,593,601	+		PFLU_RS07130	0.85	+0.1
1,593,602	-		PFLU_RS07130	0.85	+0.8
1,593,755	+		PFLU_RS07130	0.90	+0.2
1,593,756	-		PFLU_RS07130	0.90	-0.1
1,593,756	-		PFLU_RS07130	0.90	+1.5
1,593,768	-				-0.6
1,593,768	-				+0.1
1,593,805	+				+0.7
1,593,805	+				+0.6
1,593,805	+				+0.1
1,593,806	-				-0.4
1,593,806	-				-1.3
1,593,849	+				+0.6
1,593,849	+				+0.5
1,593,849	+				-1.8
1,593,849	+				+0.1
1,593,849	+				-0.1
1,593,849	+				-0.5
1,593,849	+				+0.7
1,593,849	+				+1.2
1,593,849	+				+0.5
1,593,849	+				-1.4
1,593,849	+				+3.2
1,593,849	+				+3.4
1,593,849	+				+1.1
1,593,849	+				+0.3
1,593,849	+				+0.7
1,593,849	+				-0.3
1,593,849	+				+1.0
1,593,849	+				-0.1
1,593,849	+				-0.1
1,593,849	+				+0.8
1,593,849	+				-0.7
1,593,849	+				+0.9
1,593,849	+				+0.6
1,593,849	+				+0.2
1,593,849	+				+1.0
1,593,850	-				+0.2
1,593,850	-				-1.0
1,593,850	-				+0.4
1,593,850	-				-0.4
1,593,850	-				+0.3
1,593,850	-				-1.3
1,593,850	-				+0.9
1,593,850	-				+0.5
1,593,850	-				+0.8
1,593,850	-				-1.5
1,593,850	-				+0.3
1,593,850	-				-0.7
1,593,850	-				-0.8
1,593,850	-				-1.7
1,593,850	-				+3.3
1,593,850	-				-0.4
1,593,850	-				+0.7
1,593,850	-				-0.1
1,593,850	-				-0.3
1,593,850	-				-0.4
1,593,850	-				-3.3
1,593,850	-				-1.2
1,593,850	-				-0.1
1,593,854	+				-1.0
1,593,930	+				+0.7
1,593,949	+				-1.0
1,593,949	+				-0.4
1,593,949	+				+0.5
1,593,949	+				+0.4
1,593,950	-				-1.2
1,593,950	-				-0.7
1,593,950	-				+1.1
1,593,950	-				-0.5
1,593,994	-				+0.3
1,594,122	+				-1.0
1,594,122	+				-0.4
1,594,122	+				-0.2
1,594,122	+				-0.5
1,594,122	+				-0.1
1,594,122	+				+0.0
1,594,122	+				-0.8
1,594,123	-				+0.5
1,594,123	-				+0.1
1,594,123	-				+0.2
1,594,123	-				+0.1
1,594,123	-				-0.6
1,594,123	-				+0.9
1,594,123	-				-0.8
1,594,123	-				+1.5
1,594,124	+				+1.6
1,594,124	+				+0.1
1,594,124	+				-1.5
1,594,124	+				-0.4
1,594,124	+				+0.7
1,594,124	+				-1.8
1,594,124	+				+0.3
1,594,124	+				+1.6
1,594,124	+				-1.1
1,594,124	+				+0.6
1,594,124	+				+0.0
1,594,124	+				-0.3
1,594,124	+				+0.0
1,594,125	-				-0.3
1,594,125	-				-0.7
1,594,125	-				+1.2
1,594,125	-				+0.2
1,594,125	-				+0.3
1,594,125	-				-1.4
1,594,125	-				-0.5
1,594,125	-				-0.6
1,594,125	-				+0.0
1,594,125	-				+0.9
1,594,125	-				-0.1
1,594,125	-				+0.6
1,594,125	-				+0.9
1,594,125	-				-0.4
1,594,137	+				+1.0
1,594,137	+				-0.1
1,594,137	+				-0.3
1,594,137	+				-1.1
1,594,138	-				+1.8
1,594,138	-				+0.3
1,594,153	+				+2.6
1,594,154	-				+0.4
1,594,638	-		PFLU_RS07135	0.38	+1.0
1,594,643	+		PFLU_RS07135	0.39	-1.0
1,594,785	+		PFLU_RS07135	0.53	-0.7
1,594,785	+		PFLU_RS07135	0.53	+0.8
1,594,786	-		PFLU_RS07135	0.53	+1.0
1,594,786	-		PFLU_RS07135	0.53	-0.2
1,594,786	-		PFLU_RS07135	0.53	+1.0
1,594,786	-		PFLU_RS07135	0.53	+1.5
1,594,912	+		PFLU_RS07135	0.65	+1.3
1,594,913	-		PFLU_RS07135	0.65	+1.9
1,594,964	+		PFLU_RS07135	0.70	+0.8
1,594,964	+		PFLU_RS07135	0.70	+0.5
1,594,965	-		PFLU_RS07135	0.70	+0.7