Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07045

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,571,066	+				-0.2
1,571,066	+				+0.5
1,571,066	+				+0.9
1,571,066	+				+0.1
1,571,067	-				+1.5
1,571,067	-				+1.6
1,571,067	-				+0.1
1,571,085	+				+0.0
1,571,100	+				+0.1
1,571,101	-				+0.3
1,571,101	-				+1.4
1,571,111	+				+0.3
1,571,160	+				-1.1
1,571,160	+				+0.3
1,571,161	-				-0.6
1,571,161	-				-0.5
1,571,202	+		PFLU_RS07035	0.10	-1.8
1,571,202	+		PFLU_RS07035	0.10	+1.2
1,571,224	+		PFLU_RS07035	0.17	-0.8
1,571,224	+		PFLU_RS07035	0.17	+0.7
1,571,224	+		PFLU_RS07035	0.17	+0.2
1,571,224	+		PFLU_RS07035	0.17	-3.4
1,571,224	+		PFLU_RS07035	0.17	-0.8
1,571,224	+		PFLU_RS07035	0.17	-1.1
1,571,225	-		PFLU_RS07035	0.18	-2.0
1,571,225	-		PFLU_RS07035	0.18	-0.5
1,571,225	-		PFLU_RS07035	0.18	+0.0
1,571,225	-		PFLU_RS07035	0.18	+0.1
1,571,225	-		PFLU_RS07035	0.18	-0.0
1,571,267	+		PFLU_RS07035	0.31	-1.2
1,571,267	+		PFLU_RS07035	0.31	-0.6
1,571,267	+		PFLU_RS07035	0.31	+0.9
1,571,267	+		PFLU_RS07035	0.31	+0.5
1,571,267	+		PFLU_RS07035	0.31	-0.8
1,571,267	+		PFLU_RS07035	0.31	-1.3
1,571,267	+		PFLU_RS07035	0.31	+0.7
1,571,267	+		PFLU_RS07035	0.31	+1.4
1,571,268	-		PFLU_RS07035	0.31	-1.8
1,571,268	-		PFLU_RS07035	0.31	+0.2
1,571,276	+		PFLU_RS07035	0.33	+0.3
1,571,276	+		PFLU_RS07035	0.33	-0.5
1,571,276	+		PFLU_RS07035	0.33	-0.6
1,571,276	+		PFLU_RS07035	0.33	+0.0
1,571,277	-		PFLU_RS07035	0.34	+0.0
1,571,277	-		PFLU_RS07035	0.34	+1.6
1,571,331	+		PFLU_RS07035	0.50	-0.9
1,571,343	+		PFLU_RS07035	0.54	+0.4
1,571,343	+		PFLU_RS07035	0.54	+0.2
1,571,343	+		PFLU_RS07035	0.54	+0.4
1,571,343	+		PFLU_RS07035	0.54	-0.3
1,571,344	-		PFLU_RS07035	0.54	-0.1
1,571,344	-		PFLU_RS07035	0.54	-0.1
1,571,344	-		PFLU_RS07035	0.54	+0.7
1,571,344	-		PFLU_RS07035	0.54	+0.7
1,571,344	-		PFLU_RS07035	0.54	+0.3
1,571,344	-		PFLU_RS07035	0.54	+0.0
1,571,417	+		PFLU_RS07035	0.77	-1.2
1,571,418	-		PFLU_RS07035	0.77	-0.6
1,571,426	+		PFLU_RS07035	0.80	-0.2
1,571,435	+		PFLU_RS07035	0.82	+0.0
1,571,452	+		PFLU_RS07035	0.88	+0.1
1,571,452	+		PFLU_RS07035	0.88	+0.3
1,571,535	-				+0.7
1,571,568	+				-0.1
1,571,569	-				+0.6
1,571,653	+		PFLU_RS07040	0.20	+0.3
1,571,653	+		PFLU_RS07040	0.20	-0.4
1,571,653	+		PFLU_RS07040	0.20	+1.0
1,571,653	+		PFLU_RS07040	0.20	+0.1
1,571,653	+		PFLU_RS07040	0.20	+0.2
1,571,653	+		PFLU_RS07040	0.20	+0.1
1,571,653	+		PFLU_RS07040	0.20	+1.3
1,571,653	+		PFLU_RS07040	0.20	+0.6
1,571,653	+		PFLU_RS07040	0.20	-0.3
1,571,653	+		PFLU_RS07040	0.20	-0.1
1,571,653	+		PFLU_RS07040	0.20	-1.5
1,571,653	+		PFLU_RS07040	0.20	+0.0
1,571,654	-		PFLU_RS07040	0.20	-1.3
1,571,654	-		PFLU_RS07040	0.20	+2.1
1,571,719	+		PFLU_RS07040	0.36	-0.2
1,571,719	+		PFLU_RS07040	0.36	+0.6
1,571,742	+		PFLU_RS07040	0.42	+0.4
1,571,764	+		PFLU_RS07040	0.47	+0.0
1,571,765	-		PFLU_RS07040	0.47	+0.6
1,571,784	+		PFLU_RS07040	0.52	-0.4
1,571,784	+		PFLU_RS07040	0.52	-0.4
1,571,784	+		PFLU_RS07040	0.52	-0.9
1,571,784	+		PFLU_RS07040	0.52	-1.3
1,571,784	+		PFLU_RS07040	0.52	-1.0
1,571,784	+		PFLU_RS07040	0.52	+1.2
1,571,784	+		PFLU_RS07040	0.52	-1.8
1,571,784	+		PFLU_RS07040	0.52	+1.2
1,571,784	+		PFLU_RS07040	0.52	-0.7
1,571,784	+		PFLU_RS07040	0.52	-0.8
1,571,784	+		PFLU_RS07040	0.52	-0.2
1,571,784	+		PFLU_RS07040	0.52	+0.5
1,571,784	+		PFLU_RS07040	0.52	+0.0
1,571,784	+		PFLU_RS07040	0.52	-2.2
1,571,784	+		PFLU_RS07040	0.52	+1.9
1,571,784	+		PFLU_RS07040	0.52	+0.6
1,571,785	-		PFLU_RS07040	0.52	+0.4
1,571,785	-		PFLU_RS07040	0.52	+1.6
1,571,785	-		PFLU_RS07040	0.52	-1.2
1,571,785	-		PFLU_RS07040	0.52	-0.4
1,571,785	-		PFLU_RS07040	0.52	+0.0
1,571,785	-		PFLU_RS07040	0.52	+0.4
1,571,785	-		PFLU_RS07040	0.52	+1.6
1,571,785	-		PFLU_RS07040	0.52	-0.4
1,571,785	-		PFLU_RS07040	0.52	+1.9
1,571,785	-		PFLU_RS07040	0.52	+1.6
1,571,785	-		PFLU_RS07040	0.52	+1.0
1,571,785	-		PFLU_RS07040	0.52	-0.5
1,571,785	-		PFLU_RS07040	0.52	+1.6
1,571,928	+		PFLU_RS07040	0.87	-1.4
1,571,928	+		PFLU_RS07040	0.87	-1.0
1,571,974	+				-1.1
1,572,005	+				+0.9
1,572,005	+				-0.4
1,572,005	+				-1.0
1,572,005	+				+1.2
1,572,005	+				-0.3
1,572,006	-				-1.1
1,572,006	-				+1.0
1,572,006	-				+0.8
1,572,006	-				-0.8
1,572,127	+		PFLU_RS07045	0.67	+0.4
1,572,127	+		PFLU_RS07045	0.67	-0.8
1,572,127	+		PFLU_RS07045	0.67	-0.3
1,572,128	-		PFLU_RS07045	0.68	+1.1
1,572,128	-		PFLU_RS07045	0.68	+0.2
1,572,128	-		PFLU_RS07045	0.68	-0.4
1,572,141	-		PFLU_RS07045	0.75	-3.0
1,572,141	-		PFLU_RS07045	0.75	+2.2
1,572,167	-		PFLU_RS07045	0.89	-0.7
1,572,174	-				-1.0
1,572,174	-				-0.2
1,572,174	-				-1.4
1,572,174	-				+0.8
1,572,174	-				+1.1
1,572,181	-				+0.2
1,572,239	+				+1.2
1,572,239	+				-0.7
1,572,240	-				+1.4
1,572,240	-				-0.5
1,572,240	-				+0.4
1,572,245	+				-0.3
1,572,245	+				+0.7
1,572,246	-				+0.8
1,572,246	-				+1.1
1,572,246	-				+0.8
1,572,246	-				+1.6
1,572,250	+				+0.2
1,572,250	+				+0.5
1,572,250	+				+0.0
1,572,251	-				-2.6
1,572,251	-				+0.6
1,572,251	-				+0.3
1,572,251	-				-0.9
1,572,251	-				-2.5
1,572,251	-				-2.7
1,572,251	-				+0.8
1,572,254	+				+1.0
1,572,255	-				+1.1
1,572,255	-				-0.9
1,572,255	-				-0.0
1,572,300	+				+1.1
1,572,300	+				+0.5
1,572,300	+				-1.0
1,572,300	+				+0.3
1,572,300	+				+0.5
1,572,300	+				-1.2
1,572,300	+				-0.8
1,572,301	-				-0.4
1,572,301	-				+0.2
1,572,301	-				-0.4
1,572,301	-				-0.8
1,572,301	-				+0.9
1,572,301	-				+0.7
1,572,301	-				-0.3
1,572,301	-				-0.1
1,572,328	+				-0.1
1,572,329	-				+0.2
1,572,332	+				-1.6
1,572,332	+				-1.2
1,572,332	+				-1.2
1,572,332	+				+0.6
1,572,332	+				-2.3
1,572,333	-				-0.6
1,572,333	-				-3.0
1,572,333	-				+1.1
1,572,333	-				+0.7
1,572,333	-				-0.5
1,572,333	-				-0.0
1,572,333	-				+1.4
1,572,333	-				-2.4
1,572,333	-				+0.8
1,572,363	+				-0.3
1,572,363	+				-0.0
1,572,363	+				+1.5
1,572,364	-				+0.4
1,572,364	-				+1.1
1,572,364	-				-3.1
1,572,364	-				-2.3
1,572,364	-				-0.5
1,572,364	-				-0.5
1,572,367	+				-1.0
1,572,367	+				-1.0
1,572,367	+				+1.3
1,572,367	+				-0.7
1,572,367	+				+0.3
1,572,367	+				-0.2
1,572,367	+				+0.8
1,572,367	+				-0.4
1,572,367	+				+0.1
1,572,367	+				-0.0
1,572,368	-				-0.8
1,572,368	-				-1.0
1,572,368	-				+0.1
1,572,368	-				+2.0
1,572,368	-				-1.0
1,572,368	-				+0.7
1,572,368	-				-0.7
1,572,368	-				-0.6
1,572,476	+		PFLU_RS07050	0.14	-1.6
1,572,476	+		PFLU_RS07050	0.14	-0.1
1,572,476	+		PFLU_RS07050	0.14	+0.1
1,572,476	+		PFLU_RS07050	0.14	+0.3
1,572,476	+		PFLU_RS07050	0.14	+0.9
1,572,476	+		PFLU_RS07050	0.14	+1.0
1,572,476	+		PFLU_RS07050	0.14	-2.0
1,572,476	+		PFLU_RS07050	0.14	-2.5
1,572,476	+		PFLU_RS07050	0.14	-1.5
1,572,476	+		PFLU_RS07050	0.14	-1.3
1,572,476	+		PFLU_RS07050	0.14	+0.3
1,572,476	+		PFLU_RS07050	0.14	-1.0
1,572,476	+		PFLU_RS07050	0.14	-0.6
1,572,477	-		PFLU_RS07050	0.14	-0.0
1,572,477	-		PFLU_RS07050	0.14	+0.2
1,572,477	-		PFLU_RS07050	0.14	-0.0
1,572,477	-		PFLU_RS07050	0.14	+0.2
1,572,477	-		PFLU_RS07050	0.14	+0.1
1,572,477	-		PFLU_RS07050	0.14	-0.0
1,572,489	+		PFLU_RS07050	0.15	-0.3
1,572,490	-		PFLU_RS07050	0.15	+0.6
1,572,490	-		PFLU_RS07050	0.15	-0.2
1,572,490	-		PFLU_RS07050	0.15	+1.4
1,572,518	-		PFLU_RS07050	0.18	-1.1
1,572,614	+		PFLU_RS07050	0.29	+0.4
1,572,796	+		PFLU_RS07050	0.49	+0.4
1,572,797	-		PFLU_RS07050	0.49	-0.1
1,572,956	+		PFLU_RS07050	0.67	+0.3
1,572,956	+		PFLU_RS07050	0.67	+0.6
1,572,957	-		PFLU_RS07050	0.67	+0.5
1,572,957	-		PFLU_RS07050	0.67	-0.2
1,572,957	-		PFLU_RS07050	0.67	+0.1
1,573,047	-		PFLU_RS07050	0.77	-0.4