Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS13185

Experiment: D-Glucuronic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucuronic Acid (C)
2,569,677	+		ABIE40_RS13175	0.65	-1.8
2,569,677	+		ABIE40_RS13175	0.65	-2.4
2,569,677	+		ABIE40_RS13175	0.65	-0.7
2,569,677	+		ABIE40_RS13175	0.65	+0.0
2,569,678	-		ABIE40_RS13175	0.65	-0.5
2,569,678	-		ABIE40_RS13175	0.65	-0.6
2,569,678	-		ABIE40_RS13175	0.65	-0.1
2,569,678	-		ABIE40_RS13175	0.65	-1.6
2,569,678	-		ABIE40_RS13175	0.65	+3.9
2,569,678	-		ABIE40_RS13175	0.65	-0.6
2,569,800	+		ABIE40_RS13175	0.83	-0.2
2,569,801	-		ABIE40_RS13175	0.83	-1.0
2,569,801	-		ABIE40_RS13175	0.83	+0.2
2,569,828	+		ABIE40_RS13175	0.87	+0.6
2,569,828	+		ABIE40_RS13175	0.87	-0.7
2,569,829	-		ABIE40_RS13175	0.87	+0.6
2,570,143	+		ABIE40_RS13180	0.39	+0.2
2,570,143	+		ABIE40_RS13180	0.39	-1.2
2,570,143	+		ABIE40_RS13180	0.39	-0.1
2,570,143	+		ABIE40_RS13180	0.39	+0.3
2,570,144	-		ABIE40_RS13180	0.39	-1.0
2,570,144	-		ABIE40_RS13180	0.39	-0.7
2,570,144	-		ABIE40_RS13180	0.39	-1.4
2,570,144	-		ABIE40_RS13180	0.39	-0.9
2,570,144	-		ABIE40_RS13180	0.39	-0.7
2,570,323	+		ABIE40_RS13180	0.72	-0.8
2,570,372	-		ABIE40_RS13180	0.81	+0.1
2,570,476	+				+0.2
2,570,477	-				+0.3
2,570,775	-		ABIE40_RS13185	0.11	-0.0
2,570,887	+		ABIE40_RS13185	0.16	-0.4
2,570,887	+		ABIE40_RS13185	0.16	+1.6
2,570,888	-		ABIE40_RS13185	0.16	-0.7
2,570,888	-		ABIE40_RS13185	0.16	-0.6
2,570,888	-		ABIE40_RS13185	0.16	-0.6
2,570,888	-		ABIE40_RS13185	0.16	-1.6
2,570,888	-		ABIE40_RS13185	0.16	+0.6
2,570,888	-		ABIE40_RS13185	0.16	+0.4
2,570,888	-		ABIE40_RS13185	0.16	-0.2
2,570,888	-		ABIE40_RS13185	0.16	+0.6
2,570,888	-		ABIE40_RS13185	0.16	-0.8
2,570,888	-		ABIE40_RS13185	0.16	-0.2
2,570,911	+		ABIE40_RS13185	0.18	-0.7
2,570,911	+		ABIE40_RS13185	0.18	+1.6
2,570,911	+		ABIE40_RS13185	0.18	-0.4
2,570,912	-		ABIE40_RS13185	0.18	+0.7
2,571,083	-		ABIE40_RS13185	0.26	-0.4
2,571,083	-		ABIE40_RS13185	0.26	-0.1
2,571,115	+		ABIE40_RS13185	0.28	-0.6
2,571,116	-		ABIE40_RS13185	0.28	+1.1
2,571,116	-		ABIE40_RS13185	0.28	-1.0
2,571,160	+		ABIE40_RS13185	0.30	-0.0
2,571,160	+		ABIE40_RS13185	0.30	-1.2
2,571,160	+		ABIE40_RS13185	0.30	+2.0
2,571,160	+		ABIE40_RS13185	0.30	+0.9
2,571,161	-		ABIE40_RS13185	0.30	-1.4
2,571,307	+		ABIE40_RS13185	0.38	-0.9
2,571,307	+		ABIE40_RS13185	0.38	-0.3
2,571,308	-		ABIE40_RS13185	0.38	+0.4
2,571,308	-		ABIE40_RS13185	0.38	+0.4
2,571,308	-		ABIE40_RS13185	0.38	+1.4
2,571,308	-		ABIE40_RS13185	0.38	+1.2
2,571,309	+		ABIE40_RS13185	0.38	+0.8
2,571,310	-		ABIE40_RS13185	0.38	-0.7
2,571,310	-		ABIE40_RS13185	0.38	+1.4
2,571,627	+		ABIE40_RS13185	0.55	+0.0
2,571,850	+		ABIE40_RS13185	0.66	+0.6
2,571,850	+		ABIE40_RS13185	0.66	+1.6
2,571,850	+		ABIE40_RS13185	0.66	+1.2
2,571,850	+		ABIE40_RS13185	0.66	-0.9
2,571,850	+		ABIE40_RS13185	0.66	-0.9
2,571,850	+		ABIE40_RS13185	0.66	-1.6
2,571,850	+		ABIE40_RS13185	0.66	-0.5
2,571,850	+		ABIE40_RS13185	0.66	-0.1
2,571,850	+		ABIE40_RS13185	0.66	+1.3
2,571,850	+		ABIE40_RS13185	0.66	-2.0
2,571,850	+		ABIE40_RS13185	0.66	-0.1
2,571,851	-		ABIE40_RS13185	0.66	+0.6
2,571,851	-		ABIE40_RS13185	0.66	+0.6
2,571,926	+		ABIE40_RS13185	0.70	+0.4
2,571,926	+		ABIE40_RS13185	0.70	-1.2
2,571,926	+		ABIE40_RS13185	0.70	+0.9
2,571,927	-		ABIE40_RS13185	0.70	+0.3
2,572,012	+		ABIE40_RS13185	0.75	+0.5
2,572,066	+		ABIE40_RS13185	0.77	+0.7
2,572,066	+		ABIE40_RS13185	0.77	-0.3
2,572,067	-		ABIE40_RS13185	0.77	+0.6
2,572,067	-		ABIE40_RS13185	0.77	+0.6
2,572,067	-		ABIE40_RS13185	0.77	-0.0
2,572,282	+		ABIE40_RS13185	0.89	-0.7
2,572,282	+		ABIE40_RS13185	0.89	-1.7
2,572,282	+		ABIE40_RS13185	0.89	-0.7
2,572,283	+		ABIE40_RS13185	0.89	-0.9
2,572,283	-		ABIE40_RS13185	0.89	-0.8
2,572,283	-		ABIE40_RS13185	0.89	+0.4
2,572,283	-		ABIE40_RS13185	0.89	+0.7
2,572,452	+				-0.4
2,572,453	-				-0.1
2,572,479	+				+0.6
2,572,534	+				-1.4
2,572,534	+				+0.6
2,572,534	+				-0.2
2,572,535	-				-0.5
2,572,535	-				-1.5
2,572,535	-				+0.3
2,572,535	-				-1.0
2,572,535	-				+0.6
2,572,536	+				-1.2
2,572,537	-				-0.2
2,572,574	+		ABIE40_RS13190	0.15	-0.1
2,572,574	+		ABIE40_RS13190	0.15	+1.2
2,572,574	+		ABIE40_RS13190	0.15	-0.3
2,572,574	+		ABIE40_RS13190	0.15	+0.4
2,572,575	-		ABIE40_RS13190	0.15	+0.2
2,572,575	-		ABIE40_RS13190	0.15	-0.4
2,572,575	-		ABIE40_RS13190	0.15	-0.2
2,572,575	-		ABIE40_RS13190	0.15	-0.6
2,572,575	-		ABIE40_RS13190	0.15	+0.9
2,572,910	-		ABIE40_RS13190	0.67	+0.5
2,572,920	+		ABIE40_RS13190	0.69	+0.4
2,572,932	+		ABIE40_RS13190	0.71	+1.4
2,572,932	+		ABIE40_RS13190	0.71	+1.3
2,572,933	-		ABIE40_RS13190	0.71	-1.4
2,572,933	-		ABIE40_RS13190	0.71	+0.6
2,572,933	-		ABIE40_RS13190	0.71	-0.2
2,573,008	+		ABIE40_RS13190	0.83	+1.9
2,573,008	+		ABIE40_RS13190	0.83	+0.2
2,573,008	+		ABIE40_RS13190	0.83	+0.3
2,573,008	+		ABIE40_RS13190	0.83	+0.9
2,573,008	+		ABIE40_RS13190	0.83	-0.1
2,573,008	+		ABIE40_RS13190	0.83	-1.2
2,573,008	+		ABIE40_RS13190	0.83	-0.1
2,573,009	-		ABIE40_RS13190	0.83	-0.0
2,573,009	-		ABIE40_RS13190	0.83	+1.0
2,573,009	-		ABIE40_RS13190	0.83	-0.3
2,573,010	+		ABIE40_RS13190	0.83	-1.1
2,573,010	+		ABIE40_RS13190	0.83	-0.3
2,573,010	+		ABIE40_RS13190	0.83	+0.5
2,573,010	+		ABIE40_RS13190	0.83	+3.6
2,573,010	+		ABIE40_RS13190	0.83	-0.6
2,573,010	+		ABIE40_RS13190	0.83	-2.6
2,573,010	+		ABIE40_RS13190	0.83	+0.6
2,573,011	-		ABIE40_RS13190	0.83	-0.1
2,573,011	-		ABIE40_RS13190	0.83	-0.9
2,573,011	-		ABIE40_RS13190	0.83	-0.6
2,573,011	-		ABIE40_RS13190	0.83	-0.7
2,573,011	-		ABIE40_RS13190	0.83	-0.1
2,573,011	-		ABIE40_RS13190	0.83	+0.2
2,573,011	-		ABIE40_RS13190	0.83	+0.9
2,573,011	-		ABIE40_RS13190	0.83	+1.4
2,573,011	-		ABIE40_RS13190	0.83	-0.7
2,573,011	-		ABIE40_RS13190	0.83	+0.4
2,573,111	+				-2.4
2,573,111	+				+1.3
2,573,111	+				+0.8
2,573,111	+				+0.2
2,573,112	-				+0.8
2,573,146	+				-0.7
2,573,191	+				+0.3
2,573,196	-				-0.6
2,573,218	+				+0.3
2,573,271	+				-1.8
2,573,271	+				-0.7
2,573,272	-				+0.6
2,573,272	-				-1.6
2,573,272	-				-0.4
2,573,419	+		ABIE40_RS13195	0.44	-0.4