Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS09615

Experiment: D-Glucuronic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucuronic Acid (C)
1,855,871	+		ABIE40_RS09610	0.45	-0.6
1,855,871	+		ABIE40_RS09610	0.45	-0.4
1,855,871	+		ABIE40_RS09610	0.45	+0.2
1,855,872	-		ABIE40_RS09610	0.45	+1.7
1,855,872	-		ABIE40_RS09610	0.45	+0.4
1,855,872	-		ABIE40_RS09610	0.45	+0.8
1,855,872	-		ABIE40_RS09610	0.45	+0.4
1,856,026	+		ABIE40_RS09610	0.59	-0.6
1,856,027	-		ABIE40_RS09610	0.60	+1.1
1,856,123	+		ABIE40_RS09610	0.68	-0.5
1,856,123	+		ABIE40_RS09610	0.68	+2.0
1,856,124	-		ABIE40_RS09610	0.68	-1.2
1,856,124	-		ABIE40_RS09610	0.68	-0.5
1,856,207	-		ABIE40_RS09610	0.76	-0.7
1,856,298	-		ABIE40_RS09610	0.84	-0.2
1,856,438	+				-0.1
1,856,438	+				-1.1
1,856,438	+				-0.1
1,856,438	+				-0.1
1,856,438	+				+0.2
1,856,439	-				-0.3
1,856,439	-				+0.2
1,856,439	-				-0.7
1,856,439	-				-0.2
1,856,439	-				+0.2
1,856,439	-				-0.1
1,856,561	+				+0.1
1,856,561	+				+0.2
1,856,561	+				+0.1
1,856,561	+				+0.4
1,856,561	+				+1.2
1,856,561	+				+3.8
1,856,561	+				-0.1
1,856,562	-				+0.5
1,856,562	-				-0.6
1,856,562	-				-0.8
1,856,620	-				+1.2
1,856,623	+				-0.6
1,856,623	+				-1.9
1,856,623	+				+0.2
1,856,623	+				+0.3
1,856,705	+		ABIE40_RS09615	0.11	-1.8
1,856,706	-		ABIE40_RS09615	0.11	-0.3
1,856,706	-		ABIE40_RS09615	0.11	+0.4
1,856,706	-		ABIE40_RS09615	0.11	-3.0
1,856,767	+		ABIE40_RS09615	0.14	-0.6
1,856,767	+		ABIE40_RS09615	0.14	+0.4
1,856,767	+		ABIE40_RS09615	0.14	-0.8
1,856,767	+		ABIE40_RS09615	0.14	-1.2
1,856,768	-		ABIE40_RS09615	0.14	+0.8
1,856,768	-		ABIE40_RS09615	0.14	+0.1
1,856,768	-		ABIE40_RS09615	0.14	-0.5
1,856,768	-		ABIE40_RS09615	0.14	-0.2
1,856,768	-		ABIE40_RS09615	0.14	+0.7
1,856,768	-		ABIE40_RS09615	0.14	-0.3
1,856,769	+		ABIE40_RS09615	0.14	+0.3
1,856,769	+		ABIE40_RS09615	0.14	-1.0
1,856,769	+		ABIE40_RS09615	0.14	-1.2
1,856,769	+		ABIE40_RS09615	0.14	+0.5
1,856,770	-		ABIE40_RS09615	0.15	-0.3
1,856,770	-		ABIE40_RS09615	0.15	-0.6
1,856,926	+		ABIE40_RS09615	0.23	-0.4
1,857,070	-		ABIE40_RS09615	0.31	+1.1
1,857,233	+		ABIE40_RS09615	0.40	+0.2
1,857,234	-		ABIE40_RS09615	0.40	-0.3
1,857,234	-		ABIE40_RS09615	0.40	+0.2
1,857,357	+		ABIE40_RS09615	0.46	-0.2
1,857,357	+		ABIE40_RS09615	0.46	+0.7
1,857,357	+		ABIE40_RS09615	0.46	-0.4
1,857,589	+		ABIE40_RS09615	0.59	+0.1
1,857,589	+		ABIE40_RS09615	0.59	-0.2
1,857,589	+		ABIE40_RS09615	0.59	+0.5
1,857,589	+		ABIE40_RS09615	0.59	+0.7
1,857,590	-		ABIE40_RS09615	0.59	-0.5
1,857,590	-		ABIE40_RS09615	0.59	-1.3
1,857,590	-		ABIE40_RS09615	0.59	+0.1
1,857,590	-		ABIE40_RS09615	0.59	+0.3
1,857,590	-		ABIE40_RS09615	0.59	+1.4
1,857,590	-		ABIE40_RS09615	0.59	-0.2
1,857,590	-		ABIE40_RS09615	0.59	-1.3
1,857,645	+		ABIE40_RS09615	0.62	+1.2
1,857,645	+		ABIE40_RS09615	0.62	-0.2
1,857,645	+		ABIE40_RS09615	0.62	+0.8
1,857,738	+		ABIE40_RS09615	0.67	+2.8
1,857,738	+		ABIE40_RS09615	0.67	+0.0
1,857,738	+		ABIE40_RS09615	0.67	-0.2
1,857,738	+		ABIE40_RS09615	0.67	+0.4
1,857,738	+		ABIE40_RS09615	0.67	-3.6
1,857,738	+		ABIE40_RS09615	0.67	-0.1
1,857,738	+		ABIE40_RS09615	0.67	-0.0
1,857,738	+		ABIE40_RS09615	0.67	+0.5
1,857,739	-		ABIE40_RS09615	0.67	-0.1
1,857,739	-		ABIE40_RS09615	0.67	+1.0
1,857,739	-		ABIE40_RS09615	0.67	-0.3
1,857,740	+		ABIE40_RS09615	0.67	+0.2
1,857,740	+		ABIE40_RS09615	0.67	+0.4
1,857,740	+		ABIE40_RS09615	0.67	+0.4
1,857,740	+		ABIE40_RS09615	0.67	-2.2
1,857,740	+		ABIE40_RS09615	0.67	-0.0
1,857,740	+		ABIE40_RS09615	0.67	+1.9
1,857,740	+		ABIE40_RS09615	0.67	+0.3
1,857,741	-		ABIE40_RS09615	0.67	-0.8
1,857,741	-		ABIE40_RS09615	0.67	+2.2
1,857,758	+		ABIE40_RS09615	0.68	-0.5
1,857,834	+		ABIE40_RS09615	0.72	+0.8
1,857,834	+		ABIE40_RS09615	0.72	+0.0
1,857,835	-		ABIE40_RS09615	0.72	+0.5
1,857,836	+		ABIE40_RS09615	0.72	-0.3
1,857,836	+		ABIE40_RS09615	0.72	+2.8
1,857,836	+		ABIE40_RS09615	0.72	+2.2
1,857,837	-		ABIE40_RS09615	0.73	+1.6
1,857,837	-		ABIE40_RS09615	0.73	-0.2
1,857,837	-		ABIE40_RS09615	0.73	+0.6
1,857,837	-		ABIE40_RS09615	0.73	-0.5
1,857,837	-		ABIE40_RS09615	0.73	+0.0
1,857,837	-		ABIE40_RS09615	0.73	-0.5
1,857,837	-		ABIE40_RS09615	0.73	+0.4
1,857,848	+		ABIE40_RS09615	0.73	-0.9
1,857,848	+		ABIE40_RS09615	0.73	-0.5
1,857,848	+		ABIE40_RS09615	0.73	+0.4
1,857,848	+		ABIE40_RS09615	0.73	+1.6
1,857,848	+		ABIE40_RS09615	0.73	+0.5
1,857,848	+		ABIE40_RS09615	0.73	-1.6
1,857,849	-		ABIE40_RS09615	0.73	-0.8
1,857,849	-		ABIE40_RS09615	0.73	-0.6
1,857,849	-		ABIE40_RS09615	0.73	-0.4
1,857,849	-		ABIE40_RS09615	0.73	-1.3
1,857,849	-		ABIE40_RS09615	0.73	-0.3
1,857,872	+		ABIE40_RS09615	0.74	-0.0
1,857,872	+		ABIE40_RS09615	0.74	-0.5
1,857,872	+		ABIE40_RS09615	0.74	-0.1
1,857,873	-		ABIE40_RS09615	0.74	+0.7
1,857,891	+		ABIE40_RS09615	0.75	-0.0
1,857,891	+		ABIE40_RS09615	0.75	-0.7
1,858,166	+				+0.8
1,858,167	-				+1.2
1,858,246	+				+0.5
1,858,288	-				-3.8
1,858,288	-				+0.8
1,858,288	-				-3.5
1,858,288	-				-1.6
1,858,498	+				+0.2
1,858,498	+				+0.9
1,858,576	+				+0.5
1,858,577	-				-2.2
1,858,577	-				+1.2
1,858,577	-				-0.9
1,858,577	-				-0.6
1,858,577	-				+1.4
1,858,619	+		ABIE40_RS09620	0.12	-1.3
1,858,665	+		ABIE40_RS09620	0.22	-0.4
1,858,665	+		ABIE40_RS09620	0.22	-1.1
1,858,855	+		ABIE40_RS09620	0.62	-0.6
1,858,856	-		ABIE40_RS09620	0.62	-1.2
1,858,856	-		ABIE40_RS09620	0.62	-1.5
1,858,919	+		ABIE40_RS09620	0.76	+0.9
1,859,045	+				-0.6
1,859,046	-				+0.6
1,859,046	-				+0.0
1,859,308	-		ABIE40_RS09625	0.73	+1.1
1,859,327	+		ABIE40_RS09625	0.79	+0.2
1,859,327	+		ABIE40_RS09625	0.79	-1.4
1,859,327	+		ABIE40_RS09625	0.79	+0.7
1,859,327	+		ABIE40_RS09625	0.79	-0.3
1,859,327	+		ABIE40_RS09625	0.79	-0.6
1,859,327	+		ABIE40_RS09625	0.79	-0.7
1,859,327	+		ABIE40_RS09625	0.79	-1.2
1,859,328	-		ABIE40_RS09625	0.80	-1.0
1,859,328	-		ABIE40_RS09625	0.80	+0.1
1,859,328	-		ABIE40_RS09625	0.80	+1.2
1,859,328	-		ABIE40_RS09625	0.80	+0.2
1,859,328	-		ABIE40_RS09625	0.80	-0.9