Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21640 and ABID97_RS21645 are separated by 18 nucleotides ABID97_RS21645 and ABID97_RS21650 are separated by 61 nucleotides ABID97_RS21650 and ABID97_RS21655 are separated by 57 nucleotides ABID97_RS21655 and ABID97_RS21660 are separated by 58 nucleotides
ABID97_RS21640: ABID97_RS21640 - CvpA family protein, at 4,477,870 to 4,478,355
_RS21640
ABID97_RS21645: ABID97_RS21645 - SPOR domain-containing protein, at 4,478,374 to 4,479,249
_RS21645
ABID97_RS21650: ABID97_RS21650 - bifunctional tetrahydrofolate synthase/dihydrofolate synthase, at 4,479,311 to 4,480,618
_RS21650
ABID97_RS21655: ABID97_RS21655 - ArsC family reductase, at 4,480,676 to 4,481,035
_RS21655
ABID97_RS21660: ABID97_RS21660 - hypothetical protein, at 4,481,094 to 4,481,714
_RS21660
Position (kb) 4479
4480
4481 Strain fitness (log2 ratio) -2
-1
0
1 at 4478.373 kb on - strand at 4478.376 kb on - strand at 4478.376 kb on - strand at 4478.376 kb on - strand at 4478.510 kb on + strand, within ABID97_RS21645 at 4478.510 kb on + strand, within ABID97_RS21645 at 4478.511 kb on - strand, within ABID97_RS21645 at 4478.511 kb on - strand, within ABID97_RS21645 at 4480.657 kb on - strand at 4480.985 kb on - strand, within ABID97_RS21655 at 4480.985 kb on - strand, within ABID97_RS21655 at 4481.033 kb on + strand at 4481.033 kb on + strand at 4481.033 kb on + strand at 4481.247 kb on + strand, within ABID97_RS21660 at 4481.248 kb on - strand, within ABID97_RS21660 at 4481.260 kb on - strand, within ABID97_RS21660 at 4481.260 kb on - strand, within ABID97_RS21660 at 4481.260 kb on - strand, within ABID97_RS21660 at 4481.280 kb on + strand, within ABID97_RS21660 at 4481.338 kb on - strand, within ABID97_RS21660 at 4481.427 kb on + strand, within ABID97_RS21660 at 4481.428 kb on - strand, within ABID97_RS21660 at 4481.451 kb on + strand, within ABID97_RS21660 at 4481.469 kb on + strand, within ABID97_RS21660 at 4481.551 kb on - strand, within ABID97_RS21660 at 4481.551 kb on - strand, within ABID97_RS21660 at 4481.551 kb on - strand, within ABID97_RS21660 at 4481.571 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.601 kb on + strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660 at 4481.602 kb on - strand, within ABID97_RS21660
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 4,478,373 - +0.5 4,478,376 - -1.2 4,478,376 - -0.4 4,478,376 - +0.7 4,478,510 + ABID97_RS21645 0.16 +0.1 4,478,510 + ABID97_RS21645 0.16 -2.0 4,478,511 - ABID97_RS21645 0.16 -1.0 4,478,511 - ABID97_RS21645 0.16 -0.8 4,480,657 - -0.4 4,480,985 - ABID97_RS21655 0.86 +0.1 4,480,985 - ABID97_RS21655 0.86 +0.1 4,481,033 + +0.5 4,481,033 + -0.2 4,481,033 + -0.7 4,481,247 + ABID97_RS21660 0.25 -0.3 4,481,248 - ABID97_RS21660 0.25 -0.8 4,481,260 - ABID97_RS21660 0.27 +0.3 4,481,260 - ABID97_RS21660 0.27 -0.2 4,481,260 - ABID97_RS21660 0.27 +1.4 4,481,280 + ABID97_RS21660 0.30 -0.4 4,481,338 - ABID97_RS21660 0.39 -0.4 4,481,427 + ABID97_RS21660 0.54 -0.3 4,481,428 - ABID97_RS21660 0.54 -0.5 4,481,451 + ABID97_RS21660 0.57 -0.1 4,481,469 + ABID97_RS21660 0.60 -0.4 4,481,551 - ABID97_RS21660 0.74 -2.5 4,481,551 - ABID97_RS21660 0.74 -0.3 4,481,551 - ABID97_RS21660 0.74 +0.5 4,481,571 + ABID97_RS21660 0.77 -0.2 4,481,601 + ABID97_RS21660 0.82 +0.5 4,481,601 + ABID97_RS21660 0.82 -1.2 4,481,601 + ABID97_RS21660 0.82 +0.2 4,481,601 + ABID97_RS21660 0.82 -0.4 4,481,601 + ABID97_RS21660 0.82 -0.4 4,481,601 + ABID97_RS21660 0.82 +1.3 4,481,601 + ABID97_RS21660 0.82 -0.7 4,481,601 + ABID97_RS21660 0.82 +0.1 4,481,601 + ABID97_RS21660 0.82 -0.7 4,481,602 - ABID97_RS21660 0.82 -0.1 4,481,602 - ABID97_RS21660 0.82 +0.2 4,481,602 - ABID97_RS21660 0.82 +0.1 4,481,602 - ABID97_RS21660 0.82 -0.1 4,481,602 - ABID97_RS21660 0.82 +0.7
Or see this region's nucleotide sequence